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EBI DbfetchID U46071; SV 1; linear; genomic DNA; STD; PRO; 3164 BP. XX AC U46071; XX DT 08-JUN-1996 (Rel. 48, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Rhodobacter capsulatus cytochrome c biogenesis (cycH) gene, complete cds, DE and sarcosine oxidase gene, partial cds. XX KW . XX OS Rhodobacter capsulatus OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Rhodobacter. XX RN [1] RP 1-3164 RA Lang S.E., Jenney F.E., Daldal F.; RT "Rhodobacter capsulatus cycH: A bipartite gene that affects differentially RT the biogenesis of various c-type cytochromes"; RL Unpublished. XX RN [2] RP 1-3164 RA Lang S.E., Jenney F.E., Daldal F.; RT ; RL Submitted (17-JAN-1996) to the EMBL/GenBank/DDBJ databases. RL Fevzi Daldal, Biology, University of Pennsylvania, 204 Mudd Bldg, RL Philadelphia, PA 19104-6018, USA XX FH Key Location/Qualifiers FH FT source 1..3164 FT /organism="Rhodobacter capsulatus" FT /strain="MT1131" FT /mol_type="genomic DNA" FT /db_xref="taxon:1061" FT CDS complement(<1..623) FT /codon_start=1 FT /transl_table=11 FT /product="sarcosine oxidase" FT /note="ORF1; similar to sarcosine oxidase, beta subunit, FT from Corynebacterium, Swiss-Prot Accession Number P40875" FT /db_xref="GOA:Q52671" FT /db_xref="InterPro:IPR006076" FT /db_xref="UniProtKB/Swiss-Prot:Q52671" FT /protein_id="AAB01814.1" FT /translation="MRRYSIFAVAREALRYHSGWEKAWASPEPKKRYDVIVVGAGGHGL FT ATAYYLGKVHGIKNVAIIEKGWLGGGNTGRNTTIIRSNYLQDPSAAIYEKARSLYEGLS FT QDLNYNVMFSPRGLLMLAQSEHEMRGYKRTVYANNLQNVETRWIEPKEVKKLVPILNIA FT GPRYPVLGALLQEKGGTARHDAVAWGYARACSDMGMDLLQNTEVT" FT CDS 858..2132 FT /codon_start=1 FT /transl_table=11 FT /gene="cycH" FT /product="CycH" FT /function="involved in cytochrome c biogenesis" FT /db_xref="GOA:Q52672" FT /db_xref="InterPro:IPR017560" FT /db_xref="UniProtKB/TrEMBL:Q52672" FT /protein_id="AAB01815.1" FT /translation="MLFWIICATLVAAIAFALALTLLRPRGQGLPAGAQDLQVYRAQLA FT EVEKDLARGVLSPEEAARSRVEISRRLLEADRALQAAGTAAAEAPRRGTVAAAALVVAA FT LAGAFAIYDRLGAAGLPDAPLAGRLAEAETLYQARPDQAAAEATATAERKAAEAQAAAA FT GNPVPQPDPKFLELMERLRQAVAARPNDPQGLALLSENEMALGNFRAGWEAQRRLIALK FT GDRAEAADYTRLGELMTIAAGGLVTADAEAAFAKALDMNPKDGLALFYVGLMMGQNDRP FT DRAFRLWDASLRASPPEAPWVAEIAQGIETLAWLAGEQDYTPPLPVPAGPSAEQMQAAE FT GMAPADRLAMIRGMVENLNARLANEGGSAEDWTKLISSLRVLGEADRAAAIATEARTKF FT TGRAGDLAKIEAATQVPLGTIGAAP" FT CDS 2129..2608 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF3; similar to hypothetical protein from E. coli, FT encoded by GenBank Accession Number U28377, and H. FT Influenza HI0305, Swiss-Prot Accession Number P43981" FT /db_xref="GOA:Q52673" FT /db_xref="InterPro:IPR006641" FT /db_xref="UniProtKB/Swiss-Prot:Q52673" FT /protein_id="AAB01816.1" FT /translation="MICPGMDDFAAALPRVGALAGLDLGTKTIGVAVSDTLRGIATPLR FT TIRREKFTLDVADLMKTVAERQIAGFVLGLPVNMDGSEGPRAQSTRAFARNLEKLTPLP FT ITFWDERLSTVAAERAMLEADLSRKRRAELVDHVAAGFILQGALDRLAHLGRAHG" XX SQ Sequence 3164 BP; 494 A; 1053 C; 1131 G; 486 T; 0 other; gtaacctcgg tgttttgcaa aagatccatg cccatgtcgg aacaggcccg cgcatagccc 60 caggccacgg cgtcatgccg cgcggtgcca cccttttcct gcaagagcgc ccccagcacc 120 ggatagcgcg gcccggcgat gttcaggatc ggcacgagct ttttcacttc cttcggctcg 180 atccagcggg tttcgacatt ttgcagattg ttggcgtaaa ccgtgcgctt gtagccgcgc 240 atctcgtgtt cgctttgcgc cagcatcaaa aggccgcgcg ggctgaacat gacgttgtag 300 ttcaagtcct gcgacagccc ctcgtaaagc gagcgcgcct tttcatagat cgcggcggag 360 gggtcctgca ggtagttcga gcggatgatc gtggtgttgc gcccggtgtt gccgccgccc 420 agccacccct tttcgatgat ggccacattc ttgatgccat gcaccttgcc cagataatag 480 gccgtggcta ggccatgccc gcccgccccc accacgatca cgtcgtagcg tttcttcggc 540 tcgggcgagg cccaggcctt ttcccaaccg ctgtggtagc gcagcgcctc gcgcgccacg 600 gcgaagatcg aatagcgtct catcggccct ctctcgcttc gggttggggg tggcacaggc 660 tgcatccccg agtctggctg tttcacctta gatgaaccgc ccggaccccc gaaagccccc 720 cccatgcggc aatcggcagc aaaaagcgac atcgtgcccg acaggcgcaa cacagagccg 780 tgagacagcc tttcacgctc ttgtctcttt ctgcacggcg ccaaaagcct tatgggagat 840 gcaggatagg agaccccatg ctgttctgga tcatctgcgc gacgctggtc gccgccatcg 900 ccttcgccct tgccctgacg ctgctgcgcc cgcgcggaca gggcctgccc gccggggcgc 960 aggatctgca ggtctatcgc gcgcaactgg ccgaggtgga gaaagacctt gcccgcggcg 1020 tgctgagccc ggaagaggcg gcgcggtcgc gggtggaaat ctcgcgccgg ctgctggagg 1080 cggaccgggc gctgcaggcg gcgggcacgg cggcggccga ggcgccgcgg cgcggcacgg 1140 tggcggcggc ggcgctggtg gtggcggcgc tggcgggggc tttcgcgatc tacgaccggc 1200 tcggcgcggc cggtctgccc gatgcgccgc tggccgggcg gctggccgag gcggagacgc 1260 tttatcaggc ccgcccggat caggccgcgg cggaagcgac ggccacggcc gagcgcaagg 1320 ccgccgaggc gcaggcggcg gcggcgggca acccggtgcc gcagcccgat ccgaaattcc 1380 tcgagctgat ggagcggctg cgtcaggcgg tggcggcgcg gccgaatgat ccgcaggggc 1440 tggcgctgct gtcggaaaac gagatggctt tgggcaattt ccgcgccgga tgggaggcgc 1500 agcggcggct gatcgcgctc aagggcgacc gggccgaggc ggcggattac acccgtctgg 1560 gcgagctgat gaccattgcc gcgggcgggc tggtgacggc cgatgccgag gcggcctttg 1620 ccaaggcgtt ggacatgaac ccgaaagacg ggctggcgct gttctatgtc gggctgatga 1680 tggggcagaa cgaccgcccc gaccgggcct tccggctctg ggatgcgtcc ttgcgggcct 1740 cgccgcccga ggcgccctgg gtggccgaga tcgcgcaagg gatcgagacg ctggcctggc 1800 tggcgggcga gcaggattac accccgccgc tgccggtgcc cgcgggcccc tcggccgagc 1860 agatgcaggc cgccgagggc atggcccccg ccgaccgtct ggcgatgatc cgcggcatgg 1920 tcgaaaacct gaacgcgcgg ctggcgaacg agggcggcag cgccgaggat tggacgaagc 1980 tgatctcctc gctgcgggtg ctgggcgagg cggaccgcgc cgcggcgatc gccaccgagg 2040 cgcggacgaa attcaccggc cgcgccgggg atctggcaaa gatcgaagcg gccacgcagg 2100 tgccgcttgg cacgatcgga gccgcgccat gatctgcccc gggatggacg actttgccgc 2160 ggcgctgccg cgggtggggg cgctggccgg gctcgatctg ggcacgaaga cgatcggggt 2220 cgcggtctcg gacacgctgc ggggcatcgc gacgcccctg cgcacgatcc ggcgcgagaa 2280 attcaccctc gacgtggcgg atctgatgaa gaccgtggcc gagcggcaaa tcgccgggtt 2340 cgtcctcggg ctgccggtga acatggacgg ctccgagggg ccgcgggcgc aatcgacccg 2400 ggccttcgcg cgcaaccttg aaaagctgac gcccttgccg ataaccttct gggacgagcg 2460 gctctcgacg gtggcggccg agcgcgcgat gctggaagcc gatctgtcgc gcaaacgccg 2520 ggccgaactg gtcgatcacg tcgcggcggg gttcattctg caaggcgcgc tcgaccgcct 2580 tgcgcatctg gggcgcgcgc atggctgaga acaggccgga aaacaccgac gggatctgga 2640 aacgggcgga aatcgacacg ccctgcgtga agatctgcca gatccacccg accgagcggc 2700 tttgcatcgg ctgcctgcgc acgctggacg agatcggccg ctggtcgcgg atgagccccg 2760 aagagcgccg cgcggtgatg gccgagctgc ccacccgcgc gccgcgtctg gcccagcgcc 2820 gcggcgggcg cgcggcacga caggccgagt aagggggggg cgctgccccc cgtccgcaag 2880 cggactcccc ccgggatatt tgcagcaaga tgaaaccgga tgcctttcat cttgcccgaa 2940 atatcccggg gggtgaatgg cgaagccaga ggggggcagc gcccccctgc cccggcggtc 3000 cgtggcggcg ccttgacggg cgggggcgcg ggcattaacc gaaattgcaa cagatgctgc 3060 gatcctcgcc caacccctcg ttccccggac ccgccatgac cgcctcgcgt tccctgccgc 3120 ctcaggtcgt ccacgtctat gaggccgatc tgatctgggt gacc 3164 // |
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