EBI Dbfetch

ID   U46000; SV 1; linear; mRNA; STD; PLN; 1626 BP.
XX
AC   U46000;
XX
DT   11-FEB-1996 (Rel. 46, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Nicotiana benthamiana squalene synthetase mRNA, complete cds.
XX
KW   squalene synthetase.
XX
OS   Nicotiana benthamiana
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC   Nicotiana.
XX
RN   [1]
RP   1-1626
RX   DOI; 10.1007/BF00019548
RX   PUBMED; 8704125.
RA   Hanley K.M., Nicolas O., Donaldson T.B., Smith-Monroy C., Robinson G.W.,
RA   Hellmann G.M.;
RT   "Molecular cloning, in vitro expression and characterization of a plant
RT   squalene synthetase cDNA";
RL   Plant Mol. Biol. 30(6):1139-1151(1996).
XX
RN   [2]
RP   1-1626
RA   Hanley K.M., Nicolas O., Donaldson T., Hellmann G.M.;
RT   ;
RL   Submitted (15-JAN-1996) to the EMBL/GenBank/DDBJ databases.
RL   Kathleen M. Hanley, Biosource Technologies, Inc., 3333 Vaca Valley Pkwy,
RL   Vacaville, CA 95688, USA
XX
CC   Hanley,K.M. and Chappell,J. Plant Physiol. 98, 215-220, 1992.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1626
FT                   /organism="Nicotiana benthamiana"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:4100"
FT   CDS             112..1347
FT                   /codon_start=1
FT                   /product="squalene synthetase"
FT                   /function="farnesyldiphosphate:farnesyl-diphosphate
FT                   farnesyltransferase"
FT                   /EC_number="2.5.1.21"
FT                   /db_xref="GOA:P53800"
FT                   /db_xref="HSSP:1EZF"
FT                   /db_xref="InterPro:IPR008949"
FT                   /db_xref="UniProtKB/Swiss-Prot:P53800"
FT                   /protein_id="AAA87048.1"
FT                   /translation="MGSLRAILKNPEDLYPLVKLKLAARHAEKQIPPSPNWGFCYSMLH
FT                   KVSRSFALVIQQLPVELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDR
FT                   EWHFSCGTKEYKVLMDQFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTD
FT                   DYDEYCHYVAGLVGLGLSKLFHASEKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVP
FT                   KCRMFWPREIWSKYVNKLEELKYEDNSAKAVQCLNDMVTNALPHVEDCLTYMSALRDPS
FT                   IFRFCAIPQVMAIGTLAMCYDNIEVFRGVVKMRRGLTAKVIDRTRTIADVYGAFFDFSC
FT                   MLKSKVNNNDPNATKTLKRLEVILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIIL
FT                   AIILAQLSGNRS"
FT   polyA_site      1626
FT                   /note="16 A nucleotides"
XX
SQ   Sequence 1626 BP; 459 A; 318 C; 352 G; 497 T; 0 other;
     atcatcgttt ccacgcaatt catcgttcaa cgacttcttc aaatacaacc attttgccaa        60
     cgctttctcc tcttaccaaa caaacaaccc cccaccaaag gctgaataag aatggggagt       120
     ttgagggcta ttctgaagaa tccagaggat ttatatccat tggtgaagct gaagctagcg       180
     gctcgacacg cggagaagca gatcccgccg tctccaaatt ggggcttctg ttactcaatg       240
     cttcataagg tttctcgtag ctttgctctc gtcattcaac aacttccagt cgagcttcgt       300
     gacgccgtgt gcattttcta tttggttctt cgagcacttg acactgttga ggatgatacc       360
     agcattccca ccgatgttaa agttcctatt ctgatctctt ttcatcagca tgtttatgat       420
     cgcgaatggc atttttcatg tggtacaaag gagtacaagg ttctcatgga ccagttccat       480
     catgtatcaa ctgcttttct ggagcttagg aaacattatc agcaggcaat tgaggatatt       540
     accatgagga tgggtgcagg aatggcaaaa ttcatatgca aggaggtgga aacaaccgat       600
     gattatgacg aatattgtca ctatgtagct gggcttgttg ggctaggatt gtcaaaactg       660
     ttccatgcct ctgagaaaga agatctggct tcagattctc tctccaactc catgggttta       720
     tttcttcaga aaacaaacat cattagagat tatttggaag acataaatga agtacccaag       780
     tgccgtatgt tctggccccg tgaaatatgg agtaaatatg ttaacaagct tgaggaatta       840
     aagtacgagg ataactcggc caaagcagtg caatgtctaa atgacatggt cactaatgct       900
     ttaccacatg tagaagattg tttgacttac atgtctgctt tgcgtgatcc ttccatcttt       960
     cgattctgtg ctattccaca ggtcatggca attgggacat tagctatgtg ctacgacaac      1020
     attgaagtct tcagaggagt ggtaaaaatg agacgtggtc tgactgctaa ggtcattgac      1080
     cggaccagga ctattgcaga tgtatatggt gctttttttg acttttcttg tatgctgaaa      1140
     tccaaggtta ataataatga tccaaatgca acaaaaactc tgaagaggct cgaagtgatc      1200
     ctgaaaactt gcagagattc gggaaccttg aacaaaagga aatcctacat aatcaggagc      1260
     gagcctaatt acagtccagt tctgattgtt gtcattttca tcatactggc tattattctc      1320
     gcacagctat ccggaaaccg atcttagacg atattttggg ttacaaaaaa gaagtctggt      1380
     caaggaagac agcagaagct cttggccaat tgtgtgatta gtgcagattt tgatgtttgt      1440
     aattctatcg tccattaagt gatagttgca ccttttaacc tgacaagata attacgaaga      1500
     cctatttttg gtggtttgtt gggtatgtac ttgtttgcaa ggctacgtaa gcaaattcca      1560
     agtgttgtag agtcaccgtg atgtaataaa catgtctttt attatagttt gttcattttt      1620
     gtggta                                                                 1626
//