 |
|
EBI DbfetchID U43089; SV 1; linear; genomic DNA; STD; PRO; 2558 BP. XX AC U43089; XX DT 09-JAN-1996 (Rel. 46, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Ruminococcus albus XynA (xynA) gene, complete cds. XX KW . XX OS Ruminococcus albus OC Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; OC Ruminococcus. XX RN [1] RP 1-2558 RA Nakamura M., Nagamine T., Takenaka A., Aminov R.I., Ogata K., Tajima K., RA Matsui H., Benno Y., Itabashi H.; RT "Molecular cloning, nucleotide sequence and characteristics of a xylanase RT gene (xynA) from Ruminococcus albus 7"; RL Anim. Sci. J. 73(5):347-352(2002). XX RN [2] RP 1-2558 RA Nagamine T., Takenaka A., Aminov R.I., Ogata K., Sugiura M., Tajima K., RA Itabashi H.; RT ; RL Submitted (12-DEC-1995) to the EMBL/GenBank/DDBJ databases. RL Takafumi Nagamine, Rumen Microbe Research Team, STAFF-Institute, 446-1, RL Ippaizuka, Kamiyokoba, Tsukuba, Ibaraki 305, Japan XX FH Key Location/Qualifiers FH FT source 1..2558 FT /organism="Ruminococcus albus" FT /strain="7; ATCC 27210" FT /mol_type="genomic DNA" FT /db_xref="taxon:1264" FT gene 501..2543 FT /gene="xynA" FT CDS 501..2543 FT /codon_start=1 FT /transl_table=11 FT /gene="xynA" FT /product="XynA" FT /note="xylanase A" FT /db_xref="GOA:Q52644" FT /db_xref="HSSP:1F5J" FT /db_xref="InterPro:IPR018208" FT /db_xref="UniProtKB/TrEMBL:Q52644" FT /protein_id="AAA85198.1" FT /translation="MRNNFKMRVMAGVAAVICLAGVLGSCGNSSDKDSSSKKSADSAKA FT DSNKDSKNGQVFTKNARGTSDGYDYELWKDKGDTEMTINEGGTFSCKWSNINNALFRRG FT KKFDCTKTYKELGNISVKYGVDYQPDGNSYMCVYGWTIDPLVEFYIVESWGSWRPPGAA FT ESLGTVTVDGGTYDIYKTTRYEQPSIDGTKTFDQYWSVRQDKPTGDGTKIEGTISISKH FT FDAWEQVGLTLGNMYEVALNIEGYQSNGQATIYENELTVDGNYSADPAPEVKKSSDEKE FT PEPQSTNGAGLFTADFESDECGWTSRGSAAVAQNTDEASEGRGSLFVSGRTDNWNGASI FT ELDSGTFKQGSTYSFKTDAMQKSGKEATLKFTMQYTAADGDHYDQIAQQTAPDGEWITL FT EGDYTIPDDATKLVLYVESPDSLTDFYIDNASATGDGSEPAKTADDKKEEAEYTFSDPV FT AVSNTADISWIDKDKPMVAIAFDDGASAAKKGDPAYRIIDTMADNGFHATFFYIGSQIK FT TEEQVKYAHEKGMETANHTMTHPYLSKLKPAEIRDEYEKCREKLKGIIGEEPSALMRLP FT YLDGGGDTTRTLNDVALISCSVDTKDWNKATSDKIVDTIKKAKDNGSLNGAIVLCHENY FT AATAEAMEEIVPWLKDEGWQVVTVSELFAANGKELMGGKIYSKLS" XX SQ Sequence 2558 BP; 805 A; 576 C; 589 G; 588 T; 0 other; gatcctttac ttcaagtatc ttgttcaagt tgtttctcct ttccgcggcc tgttgtccct 60 ttttctatga cccagtatat catggaaatt cttaaatagt ctttaaataa tcatcagaat 120 ggtcgtgcaa aacgagcgcc taagtgtgtc atctctgatt tttcccgata tatctgcatt 180 tcagacatat acggcaatta ttctcaaagt tattatatat gcacattaac gataatatta 240 attgtcatta atcttcgcat aaacaaatga tacaaaaaat atctctgatt taacagcaaa 300 taacaatttt tgacttgaaa aataatataa aaagtgctaa aatatagaat gataaaattc 360 gcacactcag actgcggtat tatacacggt atatttatag tatcactctt aacagctaac 420 catttatcat gcataggata atactattat aataaagaca gcagctgaaa actgtgcggg 480 aaagagaggt cataaaccga atgaggaata atttcaagat gagagtcatg gcgggagttg 540 ctgctgtgat atgtcttgca ggtgtgcttg gcagctgcgg aaattcttcg gataaggaca 600 gttcatccaa aaagtccgct gacagcgcta aggctgacag taacaaagac tcaaagaacg 660 gacaggtatt taccaaaaat gcccgcggca cttccgatgg ctacgactac gaactctgga 720 aagacaaggg cgacaccgaa atgaccatta acgagggcgg tacgttctca tgtaagtggt 780 ccaacatcaa caatgcactg ttccgcagag gaaagaaatt cgactgcacg aagacctaca 840 aggaacttgg taacatctct gtaaaatacg gtgttgacta tcagcccgac ggaaattcgt 900 atatgtgcgt ttacggctgg acaatagatc cgctggtaga gttttacatc gtagaatcat 960 ggggttcctg gaggccgccc ggagctgctg aatccctggg cacagtcacc gttgacggcg 1020 gcacgtacga tatctacaag accacaagat acgaacagcc ctcaatcgac ggcaccaaga 1080 catttgacca gtactggagc gtaagacagg ataagcccac aggcgacggc actaagatcg 1140 aaggtaccat atccatatcc aagcactttg atgcatggga gcaggtaggg ctcactctcg 1200 gtaatatgta cgaagtcgca ctgaatatcg aaggatatca gtctaacgga caggctacaa 1260 tatacgaaaa tgaactgacc gtggacggaa attactccgc agaccccgca cccgaagtca 1320 aaaagagcag cgatgaaaaa gaacccgaac cacagagcac taatggtgca ggtcttttca 1380 cggctgattt tgaatcggac gagtgcggct ggacaagcag aggctctgcc gccgttgcac 1440 agaacaccga tgaggcttcc gagggaaggg gctcactgtt cgtaagcggc agaacggata 1500 actggaacgg tgcttcaata gagctggaca gcggtacctt caagcagggc agtacctatt 1560 cattcaagac cgatgctatg cagaaaagcg gcaaggaagc taccctgaaa ttcactatgc 1620 agtatacagc cgctgacggc gatcactatg accagattgc tcagcagacc gctcccgacg 1680 gtgaatggat cactcttgag ggtgattata ctatccccga tgatgctacc aagcttgtac 1740 tgtatgttga atcacccgac agccttacag atttctatat tgacaatgca tctgcaacag 1800 gtgacggcag cgagcctgca aaaacagctg atgataaaaa ggaggaggct gaatacacat 1860 tcagcgatcc cgtagcggtc agcaatacag cggatatatc ctggatagat aaggataaac 1920 ctatggtcgc tatcgccttt gatgacggtg ccagcgccgc caagaaaggt gaccctgcat 1980 accgtatcat tgatactatg gcagataacg gcttccacgc taccttcttc tatataggaa 2040 gtcagataaa gaccgaggag caggttaagt acgctcacga gaaaggcatg gaaacagcta 2100 accataccat gacacatcca tacctctcca agctgaagcc cgcagagatc cgtgatgaat 2160 acgaaaaatg ccgcgaaaag ctcaaaggta taatcggtga agaaccttct gcattgatgc 2220 gactgccata tcttgacggc ggcggagata caaccaggac cctcaatgat gtagcactta 2280 tatcctgttc tgtagatacc aaggactgga acaaagctac ctctgacaaa atagttgata 2340 ctattaaaaa agcaaaggat aacggctcac tcaacggcgc tatagttctc tgccacgaga 2400 attatgcagc gaccgcagaa gctatggagg aaatagtacc atggctgaaa gacgaaggct 2460 ggcaggtagt taccgtatca gaactctttg cagctaacgg caaggagctc atgggcggaa 2520 aaatatactc caagctttcc tgatatattc tgttgatc 2558 // |
|