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EBI DbfetchID U40345; SV 3; linear; genomic DNA; STD; PRO; 7572 BP. XX AC U40345; XX DT 17-MAY-1996 (Rel. 47, Created) DT 08-DEC-2005 (Rel. 86, Last updated, Version 9) XX DE Clostridium cellulolyticum scaffolding protein precursor (cipC) gene, DE complete cds; and unknown genes. XX KW . XX OS Clostridium cellulolyticum OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-7572 RX PUBMED; 8636029. RA Pages S., Belaich A., Tardif C., Reverbel-Leroy C., Gaudin C., RA Belaich J.P.; RT "Interaction between the endoglucanase CelA and the scaffolding protein RT CipC of the Clostridium cellulolyticum cellulosome"; RL J. Bacteriol. 178(8):2279-2286(1996). XX RN [2] RP 1-7572 RX PUBMED; 10074072. RA Pages S., Belaich A., Fierobe H.P., Tardif C., Gaudin C., Belaich J.P.; RT "Sequence analysis of scaffolding protein CipC and ORFXp, a new RT cohesin-containing protein in Clostridium cellulolyticum: comparison of RT various cohesin domains and subcellular localization of ORFXp"; RL J. Bacteriol. 181(6):1801-1810(1999). XX RN [3] RP 1-7572 RA Reverbel-Leroy C., Tardif C., Belaich A., Bernadac A., Gaudin C., RA Belaich J.; RT "Molecular study and overexpression of the Clostridium cellulolyticum RT celCCF cellulase gene in Escherichia coli"; RL Unpublished. XX RN [4] RP 1-7572 RA Pages S.; RT ; RL Submitted (08-NOV-1995) to the EMBL/GenBank/DDBJ databases. RL Bioenergetique Ingenierie des Proteines, CNRS, 31 chemin Joseph Aiguier, RL Marseille cedex 20 13402, France XX RN [5] RC Sequence update by submitter RP 1-7572 RA Pages S., Belaich A., Reverbel C., Tardif C., Fierobe H.P., Gaudin C., RA Belaich J.P.; RT ; RL Submitted (04-AUG-1998) to the EMBL/GenBank/DDBJ databases. RL Bioenergetique Ingenierie des Proteines, CNRS, 31 chemin Joseph Aiguier, RL Marseille cedex 20 13402, France XX RN [6] RC Sequence update by submitter RP 1-7572 RA Pages S., Belaich A., Reverbel C., Tardif C., Fierobe H.P., Gaudin C., RA Belaich J.P.; RT ; RL Submitted (31-OCT-2000) to the EMBL/GenBank/DDBJ databases. RL Bioenergetique Ingenierie des Proteines, CNRS, 31 chemin Joseph Aiguier, RL Marseille cedex 20 13402, France XX RN [7] RC Sequence update by submitter RP 1-7572 RA Pages S., Belaich A., Reverbel C., Tardif C., Fierobe H.P., Gaudin C., RA Belaich J.P.; RT ; RL Submitted (26-JUL-2005) to the EMBL/GenBank/DDBJ databases. RL Bioenergetique Ingenierie des Proteines, CNRS, 31 chemin Joseph Aiguier, RL Marseille cedex 20 13402, France XX CC On Dec 5, 2005 this sequence version replaced gi:11056041. XX FH Key Location/Qualifiers FH FT source 1..7572 FT /organism="Clostridium cellulolyticum" FT /strain="ATCC 35319" FT /isolate="H10" FT /mol_type="genomic DNA" FT /db_xref="taxon:1521" FT CDS 60..827 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="Orf1p" FT /db_xref="InterPro:IPR012338" FT /db_xref="UniProtKB/TrEMBL:Q2V4T4" FT /protein_id="ABB97519.1" FT /translation="MDGLKKLITDYTSGLSGKYGVTFIDLATGEMVNVNDTDRYIAAST FT SKLPINVLLYKYIEEGKVNMDDILTYQKEDFEPGTGIIQRSAYGTQYTVRETSKLAIRK FT SDNCGVNMIIRLLDIQNIRQYLVDLGGKVYYDERHRSCPYDMALVAQDLYKHYLKNEAV FT YGDLINDLENTDWRDRIDAKLTGVKVAHKIGNQVKTANDVGIVFASHPYVLSIMADNVD FT FGTACKNEATLSKMIYDYVEGYAGSTDGLQNNN" FT CDS 948..1589 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="Orf2p" FT /db_xref="InterPro:IPR015414" FT /db_xref="UniProtKB/TrEMBL:Q2V4T3" FT /protein_id="ABB97518.1" FT /translation="MQNFIFNLIHHVIENNVIVTYLFFFLSGILQLVFPPFPSDVIIVF FT EGYLTTLGGQFHFIPVMINSILGSLIGSILVYWFGYKKGNEVLRYKIVLKYIDEKHIKR FT SEKVFHKYGKYGLILSKFIPGTSTIMVLFSGVFRVEKKVCFSYVMISIILQQLVYLLIG FT RLIGNNIDAVNRFLSYFNIFSVAILACFVIVGFVLYKVKKSKKRVSTDNK" FT CDS 1694..1855 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="Orf3p" FT /db_xref="InterPro:IPR011437" FT /db_xref="UniProtKB/TrEMBL:Q2V4T2" FT /protein_id="ABB97517.1" FT /translation="MDAPCMKVKCGVINCAYNEGHMCYADALEVNPMDGAKASISDETC FT CTTFKDKI" FT gene 2920..7572 FT /gene="cipC" FT RBS 2920..2925 FT /gene="cipC" FT CDS 2932..7572 FT /codon_start=1 FT /transl_table=11 FT /gene="cipC" FT /product="scaffolding protein precursor" FT /function="cellulase binding" FT /note="CipC" FT /db_xref="GOA:Q45996" FT /db_xref="InterPro:IPR001956" FT /db_xref="InterPro:IPR002102" FT /db_xref="InterPro:IPR005102" FT /db_xref="InterPro:IPR008965" FT /db_xref="InterPro:IPR014756" FT /db_xref="InterPro:IPR018452" FT /db_xref="PDB:1EHX" FT /db_xref="PDB:1G1K" FT /db_xref="PDB:1G43" FT /db_xref="PDB:2VN5" FT /db_xref="PDB:2VN6" FT /db_xref="UniProtKB/TrEMBL:Q45996" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAC28899.2" FT /translation="MRKKSLAFLLALTMLVTLLGAQLTAFAAGTGVVSVQFNNGSSPAS FT SNSIYARFKVTNTSGSPINLADLKLRYYYTQDADKPLTFWCDHAGYMSGSNYIDATSKV FT TGSFKAVSPAVTNADHYLEVALNSDAGSLPAGGSIEIQTRFARNDWSNFDQSNDWSYTA FT AGSYMDWQKISAFVGGTLAYGSTPDGGNPPPQDPTINPTSISAKAGSFADTKITLTPNG FT NTFNGISELQSSQYTKGTNEVTLLASYLNTLPENTTKTLTFDFGVGTKNPKLTITVLPK FT DIPGDSLKVTVGTANGKPGDTVTVPVTFADVAKMKNVGTCNFYLGYDASLLEVVSVDAG FT PIVKNAAVNFSSSASNGTISFLFLDNTITDELITADGVFANIKFKLKSVTAKTTTPVTF FT KDGGAFGDGTMSKIASVTKTNGSVTIDPGTQPTKELKVAVGTANGKPGDTVTVPVTFAD FT VVNVGNVGTCNFYLAYDASLLEVVSVDAGPIVKNAAVNFSSSASNGTISFLFLDNTITD FT ELITSDGVFANIKFKLKSVATKTTTPVTFKDGGAFGDGTMAKIATVTKTNGSVTIDPGT FT QPTKELKVAVGTANGKPGDTVTVPVTFADVASAGNVGTCNFYLAYDASLLEVVSVDAGP FT IVKNAAVNFSSSASNGSISFLFLDNTITDELITADGVFANIKFKLKSVAAKTTTPVTFK FT DGGAFGDGTMTKIATVTKTNGSVTIDPGTQPTKELKVAVGTAEGNVGDTVTVPVTFADV FT ASAGNVGTCNFYLAYDASLLDVVSVAAGPIVKNAAVNFSSSASNGSISFLFLDNTITDE FT LITADGVFANITFKLKSVTAKTTTPVTFKDGGAFGDGTMAKIATVTKTNGSVTIVPGIQ FT PTKELKVAVGTAEGNVGDTVTVPVTFADVASAGNVGTCNFYLAYDASLLDVVSVAAGPI FT VKNAAVNFSSSASNGSISFLFLDNTITDELITADGVFANISFKLKSVTSKTTTPVTFKD FT GGAFGDGTMAKIATVIKTNGSVTIVPGIQPTKELKVAVGTAEGNVGDTVTVPVTFADVA FT SAGNVGTCNFYLAYDASLLDVVSHAAGPIVKNRAVNFSSSASNGSISFLFLDNTITDEL FT ITADGVFANITFKLKSVAAKTTTPVTFKDGGAFGDGTMAKIATVTKTNGSVTIVPGIQP FT TKELKVAVGTASGKAGDTVTVPVTFADVATVGNVGTCNFYVTYDTNLLEVASVTPGSIV FT TNAAVNFSSSTSNGTISFLFLDNTITDQLIKTDGTFAEIKFKLKSVTAKTTTPVAFKDG FT GAFGDGTMAKIATVTKTNGSVTIDVGDVTPVNPTITPSTASFDKYVPANVNVTLTPNGN FT TFKGITGLTSGTDFTVSNNVVTISKSYLSTLAVGSKTLTFDFGVTNNPVLTLTITDSTP FT VVTGLGVKIASVTGKTGDTITVPVTLSNVVKSGNVGTCNFYITYDASMLQAVSATAGDI FT VLNAPVNFSSSINATTGTISILFLDNTIGDQLITSDGVVANLTFKVVGTSSTTTPIAFK FT AGGAFGNGNMSKISDITFTNGSAKLN" FT sig_peptide 2932..3012 FT /gene="cipC" FT mat_peptide 3013..7569 FT /gene="cipC" FT /product="scaffolding protein" FT /function="cellulase binding" FT /experiment="experimental evidence, no additional details FT recorded" XX SQ Sequence 7572 BP; 2647 A; 1191 C; 1479 G; 2255 T; 0 other; tcgaaactaa ggaccacggt tttctgccta atatagggtc agttaagaaa agcggaaaaa 60 tggatggact aaaaaaatta ataactgact atacctcagg gctttcagga aagtacgggg 120 ttacttttat tgatctggct acaggagaaa tggtcaatgt taatgatact gacaggtaca 180 tagcagcaag tacctcaaaa ctccctatta atgttctttt gtataaatat atcgaagaag 240 gtaaggtcaa tatggatgat attcttactt accagaagga agacttcgaa cccggtacag 300 gaataataca aaggtctgct tatggaactc agtatactgt acgtgaaaca tcaaagttgg 360 caatacgaaa aagcgataat tgtggtgtca atatgataat aagacttctg gatatacaaa 420 atatccgtca atacctggtt gatcttgggg ggaaggttta ctatgatgaa cgccatcgtt 480 catgtcccta cgatatggca ttggtagctc aggatttgta taagcactac ctgaaaaatg 540 aagctgttta tggggatctt ataaacgacc ttgaaaacac tgactggcgt gataggattg 600 atgccaagct tacaggtgta aaggttgctc ataaaatcgg caatcaggtg aaaacggcaa 660 acgatgtagg aatagtcttt gcatcacacc catatgtact ttcaattatg gcagataatg 720 tggattttgg aacagcctgt aagaatgaag caacattgtc aaaaatgatt tacgattatg 780 tagagggtta cgcaggtagt acagatggat tacaaaataa taactaaaat ataaattgca 840 aaagctcatt aacaagtctt gtgtaatgag cttttgtctt ttcagacaaa ctgtgagttt 900 ttgggtataa taggatatat gtttaccaag gaggctccca aaaaataatg caaaatttta 960 tatttaattt gatacaccat gtaatagaaa ataatgttat tgttacatat ttatttttct 1020 ttttatcagg aattcttcag ttggtgttcc cgccttttcc gtcagatgtt ataatcgtgt 1080 ttgaaggtta tctgacaacc ttaggaggtc aatttcattt tataccggta atgattaact 1140 caatactagg cagccttatc ggttcaatcc ttgtttattg gtttgggtac aaaaaaggta 1200 atgaagtttt aaggtataag atagttttaa agtatattga cgaaaaacac attaaacgtt 1260 cggaaaaggt attccataaa tatggcaagt atggcttgat cttaagtaag tttataccag 1320 ggacaagcac tataatggta ctgttttcag gagtttttcg agttgaaaag aaagtttgtt 1380 tttcatatgt aatgatatca ataattttgc agcaattagt atatttgctt atagggcgtc 1440 tgatagggaa taacattgac gcagtaaaca gattcttatc atattttaat attttttcgg 1500 tagctatttt agcttgtttc gtaatagtag ggtttgtatt atataaagta aaaaaatcta 1560 aaaaacgtgt aagtactgac aataagtgat tttagtattg cgaaatattc cctgtttaat 1620 tattaataat gtgaaaataa tatctttgag tataacattt actaaaaaaa taatactggg 1680 gaggtgattt aaaatggatg caccttgtat gaaagttaag tgtggtgtca taaattgtgc 1740 ctataatgaa ggtcatatgt gctatgccga cgcacttgag gtaaacccta tggatggagc 1800 caaagccagt ataagtgatg agacatgctg cacaacattt aaagataaaa tttgatttcg 1860 gataaccctt agaataggat aatcggattt aaatactgat tatcctattc aataaagtag 1920 ataaatgaaa ttcataagct tttagttagt tatgtcgata tactgtcaag aagtaattac 1980 aagtccaatt cgatttaatg acaaaataat ccaatttata tattattcgt actaattcca 2040 tgtctgtaca cctctttata atagtagttt taaatataac ataatatttt ttatggaaat 2100 taagcattaa aaatattaca aaaagtccaa ataattaaca taaaatttaa tttatttact 2160 ttattgaatg tagaaaaaaa gcacaaataa cagaataatg atataataat atttattaaa 2220 atttactaaa aaacctgttg aaaaaatgtt aaaaaagtac ttgtcattta attacataaa 2280 tggtaatatg gatttgaggc attaatagtt atatgaaatt atatgaaaaa aagcgtttaa 2340 aggggtaatg tattattaat taaattaaac aaaaagagga taaaatttgt aatggtaagc 2400 acctgaggta aacggcttaa aacatattca tttcaaatat ctgtaagatt cacttttagt 2460 aagtattaat tctctgagtt atattctttc tatctatcac aatatcaaag tataaattat 2520 ttcgtaagaa tcattggtta tatgtagctg taagcattat gacaaaatag gaccttcttt 2580 tcagaaaaag ttatcgttaa ttaaaaatct aataaaaagt gattataaaa aatatcaaaa 2640 taatcgcaaa aaacaaatgt gataagttta gctttgtgta cgcgtttata ttttgaaaaa 2700 ttttataaca gtagaagcat ttctgaatta atttaactta tgaaaaacca cttagctaat 2760 aaagattaag gaggtgaaat atatttattc agttatatca gtatgcctaa aaatgaactt 2820 ttttaaaaat taggcagttt ttatactggt aaggaactga atactggtga taaacctagt 2880 agtcaaaagg ccaaatggtt ttcatgtaaa ataaaaaata ggaggtttac aatgcgtaaa 2940 aagtctttag catttttgtt agcactaaca atgttggtga cattattagg ggctcagctt 3000 acagcttttg cagcaggtac tggcgtcgta tcagtgcaat ttaataatgg cagttcaccg 3060 gcatcatcaa attccatata cgctagattc aaagttacaa acacaagtgg ttcaccaatc 3120 aacttggcag atttgaaact tagatattat tacactcagg atgcggacaa gccattgaca 3180 ttctggtgtg accatgcagg ttatatgagc ggtagcaact atatagatgc cacctcaaag 3240 gtaaccggat catttaaagc agtaagtcct gctgttacaa atgcagatca ctatcttgaa 3300 gttgcattaa atagtgatgc aggaagtctt ccagctggag gatccataga gattcaaacc 3360 agatttgcaa gaaacgactg gagtaatttc gatcaatcaa atgactggtc atatactgca 3420 gccggctcat acatggattg gcagaagatt agtgcttttg taggaggaac tcttgcttac 3480 ggttcaactc ctgacggtgg aaacccacct ccacaagatc ctacaatcaa tcctacttct 3540 atttctgcaa aagcaggatc tttcgcagat actaaaataa ctcttacacc aaacggtaat 3600 actttcaatg gaattagtga attacagagt agccaatata caaaaggaac aaatgaagta 3660 acattattgg ctagctattt gaatacactt ccggaaaata ctactaagac tcttactttc 3720 gatttcggtg taggtacaaa aaatcctaaa ttgacaatta ctgttttacc aaaagatatc 3780 cctggcgatt ctcttaaagt tacagtagga acagctaatg gtaagcctgg cgatacagta 3840 acagttcctg ttacatttgc tgatgtagca aagatgaaaa acgtaggaac atgtaatttc 3900 tatcttggat atgatgcaag cctgttagag gtagtatcag tagatgcagg tccaatagtt 3960 aagaatgcag cagttaactt ctcaagcagt gcaagcaacg gaacaatcag cttcctgttc 4020 ttggataaca caattacaga cgaattgata actgcagacg gtgtgtttgc aaatattaag 4080 ttcaaattaa agagtgtaac ggctaaaact acaacaccag taacatttaa agatggtgga 4140 gcttttggtg acggaactat gtcaaagata gcttcagtta ctaagacaaa cggtagtgta 4200 actatagatc ctggtactca acctacaaag gaacttaaag tagcagtagg aacagctaat 4260 ggtaagcctg gagatacagt cacagttcct gttacatttg ctgacgtagt aaatgtaggc 4320 aatgtaggaa catgtaattt ctatcttgca tatgatgcaa gcctgttaga agtagtatca 4380 gtagatgcag gtccaatagt taagaatgca gcagttaact tctcaagcag tgcaagtaac 4440 ggaacaataa gcttcctgtt cttggataac acaattacag acgaattgat aacttcagac 4500 ggtgtgtttg caaatattaa attcaagtta aagagtgtag caactaaaac tacaacacca 4560 gtaacattta aagatggtgg agctttcggt gacggtacta tggcaaagat agctacagtt 4620 actaagacaa acggtagtgt aactatagat cctggtactc aacctacaaa ggaacttaaa 4680 gtagcagtag gaacagctaa tggtaagcct ggagatacag tcacagttcc tgttacattt 4740 gctgacgtag caagtgcagg taatgtagga acatgtaatt tctatcttgc atatgatgca 4800 agcctgttag aggtagtatc agtagatgca ggtccaatag ttaagaatgc agcagttaat 4860 ttctcaagca gtgcaagcaa tggatcaata agcttcctgt tcttggataa cacaattaca 4920 gacgaattga taactgcaga cggtgtgttt gcaaatatta aattcaaatt aaagagtgta 4980 gcagctaaaa ctacaacacc agtaacattt aaagatggtg gagctttcgg tgacggtact 5040 atgacaaaga tagctacagt tactaagaca aacggtagtg taactataga tcctggtact 5100 caacctacaa aggaacttaa agtagcagta ggaacagctg aaggtaatgt tggagataca 5160 gttacagttc ctgttacatt tgctgacgta gcaagtgcag gtaatgtagg aacatgtaat 5220 ttctatcttg catatgatgc aagcctgttg gatgttgtat cagtagctgc aggtcctata 5280 gttaagaatg cagctgttaa tttctcaagc agtgcaagca atggatcaat cagcttcctg 5340 ttcttggata acacaattac tgatgaattg ataactgcag atggtgtatt tgcaaatatc 5400 acattcaaat taaagagcgt aacagctaaa acaacaacac cagtaacatt taaagatggt 5460 ggagcttttg gtgacggtac tatggcaaag atagctacag ttactaagac aaacggtagt 5520 gtaactatag ttcccggtat tcaacctaca aaggaactta aagtagcagt aggaacagct 5580 gaaggaaacg ttggagatac agttacagtt cctgttacat ttgctgacgt agcaagtgca 5640 ggtaatgtag gaacatgtaa tttctatctt gcatatgatg caagcctgtt ggatgttgta 5700 tcagtagctg caggtccgat agttaaaaat gcagctgtta atttctcaag cagtgcaagc 5760 aatggatcaa tcagcttcct gttcttggat aacacaatta ctgatgaatt gataactgca 5820 gatggtgtgt ttgcaaatat ctcattcaaa ttaaagagcg taacatctaa aacaacaaca 5880 ccagtaacat ttaaagatgg tggagctttt ggtgacggta ctatggcaaa gatagctaca 5940 gttattaaga caaacggtag tgtaactata gttcccggta ttcaacctac aaaggaactt 6000 aaagtagcag taggaacagc tgaaggaaac gttggagata cagttacagt tcctgttaca 6060 tttgctgacg tagcaagtgc aggtaatgta ggaacatgta atttctatct tgcatatgat 6120 gcaagcctgt tggatgttgt atctcatgct gcaggtccga tagttaaaaa tcgagctgtt 6180 aatttctcaa gcagtgcaag caatggatca atcagcttcc tgttcttgga taacacaatt 6240 actgatgaat tgataactgc agatggtgtg tttgcaaata tcacattcaa attaaagagt 6300 gtagcggcta aaacaacaac accagtaaca tttaaagatg gtggagcttt cggtgacggt 6360 actatggcaa agatagctac agttactaag acaaacggta gtgtaactat agttcctggt 6420 attcaaccta caaaggaact taaagtagca gtaggaacag cttcaggtaa agccggagac 6480 actgttacag tacctgttac ttttgcagat gtagcaacag taggtaatgt aggaacttgt 6540 aatttctatg ttacttatga cacaaatctg ttggaagtag catcagtgac acctggttca 6600 atagtaacaa atgcagcagt taacttctca agtagtacaa gcaatggaac aatcagcttc 6660 ttgttcttgg acaatacaat tactgatcaa ttgattaaga ctgatggaac atttgctgaa 6720 attaaattca aattaaagag tgtaacagct aaaacaacaa caccagtagc atttaaagat 6780 ggtggagctt ttggtgacgg aactatggct aagatagcta cagttaccaa gacaaacggc 6840 agtgtgacta tagatgttgg tgatgttact ccggtaaacc caactatcac tccttcaact 6900 gcatcttttg ataagtatgt tcctgcaaat gtaaatgtaa ctcttacacc aaacggaaat 6960 actttcaaag gtatcacagg tttgacatca ggtaccgact ttacagtgtc aaataatgtt 7020 gtaacaatct caaagagcta tttgagcact ttagcagttg gttcaaagac actgacattt 7080 gattttggtg ttacaaataa tccagttctg actttaacaa tcactgactc tacacctgtt 7140 gttacaggac ttggagtaaa gattgcttca gtaacaggta aaactggtga tactataaca 7200 gtacctgtaa ctctgagcaa tgttgttaaa tcaggtaatg taggaacatg taatttctat 7260 attacatacg atgcaagcat gctgcaggca gtatcagcaa cagctggtga catagtactc 7320 aatgcaccag ttaacttctc aagcagcatc aacgcaacaa ctggtacaat cagtatcctt 7380 ttcctggata acactatagg tgatcagctc attaccagcg atggagtagt tgctaatctt 7440 acatttaaag tagtaggaac ttcaagcaca acaactccta tcgcatttaa agcaggcgga 7500 gctttcggta atggaaacat gtctaaaatt tctgatatta cattcacaaa cggaagtgca 7560 aaacttaatt aa 7572 // |
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