 |
|
EBI DbfetchID U39938; SV 1; linear; genomic DNA; STD; PRO; 1709 BP. XX AC U39938; XX DT 26-NOV-1995 (Rel. 45, Created) DT 05-JUL-1999 (Rel. 60, Last updated, Version 2) XX DE Escherichia coli pectinesterase homolog (ybhC) gene and lambda attachment DE site attL. XX KW . XX OS Escherichia coli OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; OC Enterobacteriaceae; Escherichia. XX RN [1] RP 1-1709 RA Hoagland N.A., Taylor A.F., Smith G.R., Gardner J.F.; RT "A pectinesterase homolog adjacent to the lambda attachment site on the E. RT coli chromosome"; RL Unpublished. XX RN [2] RP 1-1709 RA Taylor A.F.; RT ; RL Submitted (02-NOV-1995) to the EMBL/GenBank/DDBJ databases. RL Andrew F. Taylor, Fred Hutchinson Cancer Research Center, 1124 Columbia RL Street, Seattle, WA 98104, USA XX DR GOA; P46130. DR InterPro; IPR000070; Pectinesterase_cat. DR InterPro; IPR011050; Pectin_lyase_fold/virulence. DR InterPro; IPR012334; Pectin_lyas_fold. DR InterPro; IPR018040; Pectinesterase_AS. DR PDB; 3GRH; X-ray. DR UniProtKB/Swiss-Prot; P46130; YBHC_ECOLI. XX FH Key Location/Qualifiers FH FT source 1..1709 FT /organism="Escherichia coli" FT /map="17.4'" FT /strain="K-12" FT /mol_type="genomic DNA" FT /db_xref="taxon:562" FT misc_feature 750..764 FT /note="common core of lambda attachment site; attL" FT gene 811..1709 FT /gene="ybhC" FT misc_feature 811..>1709 FT /gene="ybhC" FT /product="YbhC" FT /note="pectinesterase homolog; frameshifted" XX SQ Sequence 1709 BP; 395 A; 444 C; 441 G; 429 T; 0 other; ggatccggcc ttttggcaaa ctgatttacc tgatgccgcc ctatattatt ctcccgcaac 60 agttgcagcg tctgaccgca gcggttaacc gcgcggtaca ggatgaaaca tttttttgcc 120 aataacgaga agtccgcgtg agggtttctg gctacacttt ctgcaaacaa gaaaggaggg 180 ttcatgaaac tcatcagtaa cgatctgcgc gatggcgata aattgccgca tcgtcatgtc 240 tttaacggca tgggttacga tggcgataat atttcaccgc atctggcgtg ggatgatgtt 300 cctgcgggaa cgaaaagttt tgttgtcacc tgctacgacc cggatgcgcc aaccggctcc 360 ggctggtggc actgggtagt tgttaactta cccgctgata cccgcgtatt accgcaaggg 420 tttggctctg gtctggtagc aatgccagac ggcgttttgc agacgcgtac cgactttggt 480 aaaaccggta cgatggcgca gcaccgccga aaggcgaaac tcatcgctac atttttaccg 540 ttcacgcgct ggatatagaa cgtattgatg tcgatgaagg tgccagcggc gcgatggtcg 600 ggtttaacgt tcatttccac tctctggcaa gcgcctcgat tactgcgatg tttagttaat 660 cactctgcca gatggcgcaa tgccatctgg tatcacttaa aggtattaaa aacaactttt 720 tgtcttttta ccttcccgtt tcgctcaagt tagtataaaa aagcaggctt caacggattc 780 atttttctat ttcatagccc ggagcaacct gtgaacacat tttcagtttc ccgtctggcg 840 ctggcattgg cttttggcgt gacgctgacc gcctgtagct caaccccgcc cgatcaacgt 900 ccttctgatc aaaccgcgct ggtacctctt ctcgcccgat tctgtcggca aaagaagcgc 960 agaatttcga tgctcaacac tattttgcat ccctgacacc aggtgctgca gcgtggaatc 1020 cttccccgat taccctgcct gcgcaacctg actttgttgt cggcccggcg ggcactcaag 1080 gtgtaacgca taccacgatt caggcggcgg tagatgcggc aattatcaag cgtaccaaca 1140 agcgccagta tattgccgtg atgcctggtg agtatcaggg aacggtatat gtccctgccg 1200 ctccgggtgg aattactctc tacggtacag gtgaaaaacc gattgatgtg aagattgggc 1260 tttcccttga tggtggcatg agccctgccg actggcgtca cgacgttcaa ccgcgcggca 1320 aatatatgcc aggtaaacca gcgtggtata tgtacgatag ctgccagagc aaacgcagcg 1380 acagtatcgg tgttctctgc tctgcggtct tctggtcaca aaacaatggc ctgcaactgc 1440 aaaatctgac catcgaaaac acgctgggcg atagcgtaga tgcaggtaac catccggcgg 1500 tggcactgcg tactgatggt gaccaggtac agattaacaa cgttaacatt ctcggtcgtc 1560 agaacacctt ctttgtcacc aacagcggtg tgcagaaccg tctggaaacg aatcgtcagc 1620 cgcgtacgct ggtgaccaac agctacattg aaggggatgt ggatatcgtt tctggtcgcg 1680 gcgcagtggt gttcgataac accgaattc 1709 // |
|