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EBI DbfetchID U39441; SV 1; linear; genomic DNA; STD; PRO; 3973 BP. XX AC U39441; XX DT 03-FEB-1996 (Rel. 46, Created) DT 31-AUG-2006 (Rel. 89, Last updated, Version 3) XX DE Vibrio harveyi malonyl-CoA:ACP transacylase (fabD) gene, partial cds, and DE 3-ketoacyl-ACP reductase (fabG), acyl carrier protein (acpP), DE 3-ketoacyl-ACP synthase II (fabF) and aminodeoxychorismate lyase (pabC) DE genes, complete cds. XX KW . XX OS Vibrio harveyi OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; OC Vibrio. XX RN [1] RP 1-3973 RX PUBMED; 8550484. RA Shen Z., Byers D.M.; RT "Isolation of Vibrio harveyi acyl carrier protein and the fabG, acpP, and RT fabF genes involved in fatty acid biosynthesis"; RL J. Bacteriol. 178(2):571-573(1996). XX RN [2] RP 1-3973 RA Byers D.M.; RT ; RL Submitted (25-OCT-1995) to the EMBL/GenBank/DDBJ databases. RL David M. Byers, ARC/Pediatrics, Dalhousie University, 5849 University RL Avenue, Halifax, Nova Scotia B3H 4H7, Canada XX CC NCBI gi: 1173839 XX FH Key Location/Qualifiers FH FT source 1..3973 FT /organism="Vibrio harveyi" FT /strain="B392" FT /mol_type="genomic DNA" FT /clone="pUSS11-pUO1" FT /db_xref="taxon:669" FT CDS <1..267 FT /codon_start=1 FT /transl_table=11 FT /gene="fabD" FT /product="malonyl-CoA:ACP transacylase" FT /db_xref="GOA:Q56692" FT /db_xref="HSSP:1MLA" FT /db_xref="InterPro:IPR001227" FT /db_xref="InterPro:IPR016035" FT /db_xref="UniProtKB/TrEMBL:Q56692" FT /protein_id="AAC43588.1" FT /translation="EFNAPQLPVINNVDVAAETDPAKIKDALVRQLHSPVRWTESVQLM FT NEQGVENLLELGPGKVLTGLTKRIVKTLSTAAVNDVASLEAAK" FT CDS 302..1036 FT /codon_start=1 FT /transl_table=11 FT /gene="fabG" FT /product="3-ketoacyl-ACP reductase" FT /db_xref="GOA:P55336" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR011284" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P55336" FT /protein_id="AAC43589.1" FT /translation="MNLEGKIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAI FT SEYLGENGKGLALNVTDVESIEATLKTINDECGAIDILVNNAGITRDNLLMRMKDDEWN FT DIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTK FT SMAREVASRGVTVNTVAPGFIETDMTKALNDDQRAATLSNVPAGRLGDPREIASAVVFL FT ASPEAAYITGETLHVNGGMYMV" FT CDS 1282..1515 FT /codon_start=1 FT /transl_table=11 FT /gene="acpP" FT /product="acyl carrier protein" FT /db_xref="GOA:P0A2W3" FT /db_xref="InterPro:IPR003231" FT /db_xref="InterPro:IPR006162" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="UniProtKB/Swiss-Prot:P0A2W3" FT /protein_id="AAC43590.1" FT /translation="MSNIEERVKKIIVEQLGVDEAEVKNEASFVDDLGADSLDTVELVM FT ALEEEFDTEIPDEEAEKITTVQAAIDYVNSAQ" FT CDS 1609..2856 FT /codon_start=1 FT /transl_table=11 FT /gene="fabF" FT /product="3-ketoacyl-ACP synthase II" FT /db_xref="GOA:P55338" FT /db_xref="InterPro:IPR000794" FT /db_xref="InterPro:IPR014030" FT /db_xref="InterPro:IPR014031" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR017568" FT /db_xref="InterPro:IPR018201" FT /db_xref="UniProtKB/Swiss-Prot:P55338" FT /protein_id="AAC43591.1" FT /translation="MSKRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATN FT FSTRFAGLVKDFDCTEYMSKKDARKMDLFIQYGIAAGIQALDDSGLEITEENAARVGVA FT IGSGIGGLDLIEAGHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTA FT CTTGLHNIGHAARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRP FT WDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGA FT LAMEAAMRDANITGTQVGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMT FT GHLLGAAGSVEAIITVLSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVDMEYAICNSF FT GFGGTNGSLVFKKIAE" FT CDS 2964..3779 FT /codon_start=1 FT /transl_table=11 FT /gene="pabC" FT /product="aminodeoxychorismate lyase" FT /db_xref="GOA:Q56693" FT /db_xref="InterPro:IPR001544" FT /db_xref="InterPro:IPR017824" FT /db_xref="InterPro:IPR018300" FT /db_xref="UniProtKB/Swiss-Prot:Q56693" FT /protein_id="AAC43592.1" FT /translation="MFWVNGLPQTHVPLGDRSFQYGDGCFSTIKTKKGQLEHWQAHVER FT MEACLTTLQIPFPDWRTVLDWAMSATLKDESAGIKIHISRGCGGRGYSPSGVEGPVVTI FT SNFSFPAHYLAWQERGVQLGVCETRLGIQPLLAGHKHNNRIEQVLAKAEIDGTEFADAV FT TLNVQNHVIETTMANLFWVKDEKVFTPGLCLSGVAGVMRRKVLEYLQSEGYSVQVADFT FT LTDLLDADEVWMCNSLLGVAPVSGISAPENKIDFPIGKLTRRLQGNLNT" XX SQ Sequence 3973 BP; 1100 A; 831 C; 979 G; 1063 T; 0 other; gaattcaacg caccacaact tccggttatc aacaacgttg atgtggcggc tgaaactgat 60 cctgcaaaaa tcaaagacgc acttgttcgt caacttcaca gcccagttcg ttggactgag 120 agcgtgcagc taatgaacga acaaggtgta gaaaatcttc ttgagcttgg tcctggcaaa 180 gttctgacag gtctgactaa acgtatcgtg aaaacactaa gcacagcagc agttaacgac 240 gtagcgtcgc tagaagccgc taagtagtct gctcacgata agaaaaggaa aacacaacat 300 gatgaatcta gaaggtaaga tcgctctagt gacaggcgca agccgtggca ttggtcgtgc 360 gattgctgaa cttcttgttg aacgcggtgc aacggtaatc ggtactgcga cttctgaagg 420 cggcgcagcg gcgatcagtg agtacctagg tgaaaacggt aaaggtctag cacttaacgt 480 aactgacgtt gagtctatcg aagcaacact aaaaaccatc aatgatgagt gtggtgcaat 540 cgatattcta gtaaacaacg ctggtatcac gcgcgataac ttgctaatgc gtatgaaaga 600 tgacgagtgg aacgacatca tcaatacaaa cctaacgcca atctaccgca tgtctaaagc 660 ggttctacgt ggcatgatga aaaaacgcgc tggtcgcatc atcaacgtag gttctgttgt 720 tggtactatg ggtaacgctg gtcaaacaaa ctatgcagca gcaaaagcgg gtgtgattgg 780 tttcactaaa tcaatggctc gtgaagtggc ttctcgtggt gtaacagtga acacggttgc 840 tccaggtttc atcgaaactg acatgactaa ggcgctaaat gacgaccaac gtgcagcaac 900 gttgtcgaac gtgccagcag gtcgtctagg tgaccctcgt gaaattgcat cagcagttgt 960 attccttgct tcacctgaag cggcttacat tactggtgaa actttgcatg taaatggtgg 1020 catgtacatg gtttaatgca cagttcgtgc aaaataagct attttacttt atgaaaaata 1080 gcctatagtt gctgttaact gtcattaagt tgtcatgctc atgcgcaaga tttgtgcatg 1140 atttaagtca aaaatgtatt gaaattcggt taaattcgct aattttgtgg tttgaccagc 1200 aaggaccccc ttgcaaactt caatagttcg aataaactac ggaatcatcg cattaggcga 1260 aatctgtaaa ggaaaagaaa aatgagcaac atcgaagaac gcgtaaagaa aatcattgtt 1320 gaacagctag gtgtagacga agcagaagtt aaaaacgaag cttctttcgt tgacgatcta 1380 ggtgctgatt ctctagacac tgtagagcta gtaatggctc tagaagagga attcgacact 1440 gagattcctg atgaagaagc agagaaaatc actactgttc aagctgcaat cgactacgta 1500 aacagcgctc agtaattatc tctcccaggc ggtctcctag accgcctgtg ttctttctaa 1560 cttcttctat cctctcatag aaacattcaa ttcccggaga attatatcgt gtccaagcgt 1620 cgtgtagttg tcactggcat gggtatgttg tcaccggtag gcaacacagt agaatcatct 1680 tggaaagccc tgctagaagg tcaaagcggt atcgtaaaca tcgagcactt cgatgcaacg 1740 aacttctcga ctcgttttgc tggtcttgta aaagattttg attgcacaga gtacatgtct 1800 aagaaagatg ctcgtaaaat ggatttgttt atccagtacg gcattgctgc gggtatccaa 1860 gcattggatg actctggctt agaaattacc gaagaaaacg cggctcgagt tggtgtagca 1920 atcggctcag gcattggcgg tctagaccta atcgaagcag gtcactcagc gctagttgag 1980 aaaggtcctc gcaaagttag cccatttttt gttccttcga ccatcgtaaa catggttgcg 2040 ggtaatctat ctatcatgcg tggtcttcgt ggtcctaaca tcgcgatctc tactgcatgt 2100 actacaggtc ttcacaacat cggtcacgcg gctcgtatga ttgcatacgg tgatgcggaa 2160 gctatggttg ctggtggtgc agaaaaagca tctactccac ttggtatggc aggcttcggt 2220 gctgcaaaag cactatcgac tcgtaacgat gaaccgcaaa aagcatcacg tccttgggat 2280 aaaggtcgtg acggcttcgt tctaggtgac ggtgcgggcg tgatggttct tgaagagtac 2340 gaacacgcaa aagcgcgcgg tgctaagatc tacgcagagc ttgttggctt cggtatgtct 2400 ggtgacgctt accacatgac ttctccaagt gaagatggct ctggtggcgc actggcaatg 2460 gaagcggcga tgcgtgacgc aaacatcaca ggtactcaag ttggttacgt gaacgctcac 2520 ggtacatcaa caccagcagg tgatgtggct gaaatcaagg gtgtgaaacg cgcacttggt 2580 gaagaaggct ctaagcaggt tcttgtctct tctactaaat ctatgactgg tcacctttta 2640 ggtgcagcag gctcagtaga agcaattatc acggttcttt cattggtaga tcaaattgtt 2700 ccaccaacga ttaacctaga tgatccagaa gaaggtttag atatcgacct tgtgccgcat 2760 actgcgcgca aagttgatat ggaatacgca atctgtaact cgttcggctt cggcggtact 2820 aacggttcgc ttgtattcaa aaaaatcgct gagtaaaagt ctctaacaca gttttagagt 2880 agcgatactt gtattctaac ggctcgatgc ttagcattga gccgttttgt tttatttgtc 2940 gatcagaaag caagggtatc tgaatgttct gggtaaatgg actgccacaa acacatgttc 3000 cactcggtga ccgttctttc caatatggtg atggctgttt ctctaccatc aaaaccaaga 3060 aagggcagtt ggagcattgg caagcgcatg ttgaacgtat ggaagcatgc ttaacgacat 3120 tacaaatccc ttttcctgat tggcgtacgg tcttggattg ggcgatgtcg gcaactttaa 3180 aagatgaatc tgccggaatc aaaattcata ttagccgcgg ttgtggtggt cgagggtata 3240 gtcctagcgg tgtcgaaggt ccggttgtca ctatctcgaa tttttcattc cctgctcact 3300 accttgcttg gcaagagcgt ggcgtgcaat taggtgtttg tgaaacccga cttggaatcc 3360 agccattact tgccggacat aagcacaata accgtataga gcaggtgctc gcaaaggcag 3420 aaattgatgg tactgaattt gctgatgctg tgacgttaaa tgtgcaaaat catgtcattg 3480 aaactacaat ggcaaacctt ttttgggtta aagatgaaaa ggtgttcaca cccggtttgt 3540 gtttatccgg tgtggctggc gtgatgcgcc gtaaggtttt ggaatatctc caaagcgaag 3600 gttactcagt gcaggtagcc gatttcacac tgacagattt gctcgatgca gatgaggtgt 3660 ggatgtgtaa ttcactattg ggtgtagcac cggtttccgg tatttcagca ccagagaaca 3720 agattgactt tccaattggg aaattgactc gacgacttca agggaatcta aatacgtgat 3780 taaaaaactg tttgcgtttg ttgtcctgat tgccgttatt gggcagcaag tgttttatac 3840 gttgtttcac agactaagca atacgttaac tcgccaattc ttattgagca gcctcagctg 3900 tttaccgctg aaaatggcac cagctttcac cgagtaatgc gtgacttggc gaaaggtaac 3960 atcatcgaag ctt 3973 // |
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