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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U36581; SV 1; linear; mRNA; STD; INV; 930 BP.
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AC   U36581;
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DT   09-DEC-1995 (Rel. 46, Created)
DT   18-APR-2005 (Rel. 83, Last updated, Version 19)
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DE   Caenorhabditis elegans cyclophilin isoform 9 (cyp-9) mRNA, complete cds.
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KW   .
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OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
XX
RN   [1]
RP   1-930
RX   DOI; 10.1038/368032a0
RX   PUBMED; 7906398.
RA   Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA   Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA   Dear S., Du Z., Durbin R., Favello A., Fulton L., Gardner A., Green P.,
RA   Hawkins T., Hillier L., Jier M., Johnston L., Jones M., Kershaw J.,
RA   Kirsten J., Laister N., Latreille P., Lightning J., Lloyd C., McMurray A.,
RA   Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA   Saunders D., Shownkeen R., Smaldon N., Smith A., Sonnhammer E., Staden R.,
RA   Sulston J., Thierry-Mieg J., Thomas K., Vaudin M., Vaughan K.,
RA   Waterston R., Watson A., Weinstock L., Wilkinson-Sproat J., Wohldman P.;
RT   "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT   elegans";
RL   Nature 368(6466):32-38(1994).
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RN   [2]
RP   1-930
RX   PUBMED; 8694762.
RA   Page A.P., MacNiven K., Hengartner M.O.;
RT   "Cloning and biochemical characterization of the cyclophilin homologues
RT   from the free-living nematode Caenorhabditis elegans";
RL   Biochem. J. 317(Pt 1):179-185(1996).
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RN   [3]
RP   1-930
RA   Page A.P.;
RT   ;
RL   Submitted (19-SEP-1995) to the EMBL/GenBank/DDBJ databases.
RL   Antony P. Page, Wellcome Unit of Molecular Parasitology, Glasgow
RL   University, 56 Dumbarton Road, Glasgow, Strathclyde G11 6NU, Scotland
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CC   On Feb 16, 1996 this sequence version replaced gi:1109679.
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FH   Key             Location/Qualifiers
FH
FT   source          1..930
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /map="IIIL"
FT                   /strain="Bristol var N2"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:6239"
FT   CDS             1..930
FT                   /codon_start=1
FT                   /gene="cyp-9"
FT                   /product="cyclophilin isoform 9"
FT                   /EC_number="5.2.1.8"
FT                   /note="PPiase; CYP-9, PPIase; Method: conceptual
FT                   translation supplied by author"
FT                   /db_xref="GOA:Q09637"
FT                   /db_xref="InterPro:IPR002130"
FT                   /db_xref="InterPro:IPR015891"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q09637"
FT                   /protein_id="AAC47131.1"
FT                   /translation="MAAEKRVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEV
FT                   GMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRP
FT                   YLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPL
FT                   AKVLISNCGELVKKKKPLKTDEELAAALEEKNNNARDNEIPKCPKSWLYRDDDNEKKHE
FT                   MRNDKRREYRSRRSRSRSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRER
FT                   SATPEHWRRNAPTKWVHDSHKHPEEDLV"
XX
SQ   Sequence 930 BP; 336 A; 168 C; 220 G; 206 T; 0 other;
     atggccgctg aaaaaagagt gttcctagat atttcagtcg atgagaatct gattggaaga        60
     attgaaatac gactttttgt cgaagatgca cctaaaacat gtgaaaactt tcgagcattg       120
     tgcacaggag aagtcggaat gactccaaat aataaagcac ggcttcatta caaacaaaac       180
     gaatttcata gaattgtaaa gaagtttatg atccagggag gagacatcac agaaggagat       240
     ggtagaggag gattctcgat ctacggacga tactttgacg atgaaaagtt caaattaaag       300
     cactcaaggc cctatttgtt gtcaatggcc aataaaggac caaattcaaa ttcttctcaa       360
     tttttcatca caacggctgc agctccacat tgcaatggaa aacatgttgt ttttggagag       420
     gttgtcaaag gacaaaacgt tgtagattac atcgacaatc ttgcggttga tgataaatcg       480
     aaaccactcg caaaagtttt gatctccaat tgtggagaac tcgtgaaaaa gaagaaacca       540
     ttgaagacag atgaagagct cgccgctgct ctcgaagaga aaaataataa cgcaagggac       600
     aatgagatcc cgaaatgccc gaaatcttgg ctctatcgtg atgatgacaa tgagaagaag       660
     catgaaatga gaaatgataa gagaagagag tatcgatcga gaagatcaag atctagatct       720
     catgagaaga atcgcgacta taagaaagaa aatcgaggag attcttcgcg aagccaacct       780
     cgcagagatg aaaacggaat tactgtacgt gggcgtggag gagtacgctt ccgacgcgaa       840
     agatctgcga ctccggagca ctggagaaga aatgcgccga cgaaatgggt tcacgacagc       900
     cacaaacatc cagaagaaga tctcgtttaa                                        930
//
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