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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U34354; SV 1; linear; mRNA; STD; INV; 575 BP.
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AC   U34354;
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DT   09-DEC-1995 (Rel. 46, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
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DE   Caenorhabditis elegans cyclophilin isoform 2 cyp-2 mRNA, complete cds.
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KW   .
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OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
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RN   [1]
RP   1-575
RX   PUBMED; 8694762.
RA   Page A.P., MacNiven K., Hengartner M.O.;
RT   "Cloning and biochemical characterization of the cyclophilin homologues
RT   from the free-living nematode Caenorhabditis elegans";
RL   Biochem. J. 317(Pt 1):179-185(1996).
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RN   [2]
RP   1-575
RA   Page A.P.;
RT   ;
RL   Submitted (21-AUG-1995) to the EMBL/GenBank/DDBJ databases.
RL   Antony P. Page, Wellcome Unit for Molecular Parasitology, Glasgow
RL   University, 56 Dumbarton Road, Glasgow, Strathclyde, Scotland, United
RL   Kingdom G11 6NU
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FH   Key             Location/Qualifiers
FH
FT   source          1..575
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="III"
FT                   /strain="Bristol N2"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:6239"
FT   CDS             1..516
FT                   /codon_start=1
FT                   /product="cyclophilin isoform 2 (cyp-2)"
FT                   /EC_number="5.2.1.8"
FT                   /note="PPIase, rotamase"
FT                   /db_xref="GOA:P52010"
FT                   /db_xref="HSSP:1E3B"
FT                   /db_xref="InterPro:IPR002130"
FT                   /db_xref="UniProtKB/Swiss-Prot:P52010"
FT                   /protein_id="AAC47127.1"
FT                   /translation="MPRVKVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKG
FT                   KGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGESIHGEKFDDENFKEKHTGPGVL
FT                   SMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCV
FT                   IADCGEMK"
FT   polyA_signal    559..564
FT   polyA_site      575
FT                   /note="20 A nucleotides"
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SQ   Sequence 575 BP; 166 A; 122 C; 167 G; 120 T; 0 other;
     atgccacgtg tcaaagtgtt catcgatatc acgattggcg gaaagaaggg aggacgcatc        60
     gttatggagc tctacaacga catcgcgccg aagacagcgg aaaacttccg cgctctgtgc       120
     accggcgaga aaggaaaagg gaaatcgggc aagaagttgc actttaaagg atccaaattt       180
     catcgcatca tccccgagtt tatgatccag ggcggcgatt ttacggaggg aaacggcacc       240
     ggcgaatcga ttcatggcga gaagtttgac gacgagaact tcaaggagaa gcataccgga       300
     cccggagtct tgtcgatggc aaactgtggg gcgaacacaa acggctcgca attcttcctg       360
     tgcacagtca aaaccacgtg gctagacgga aaacacgtgg ttttcggcaa agtgatcgaa       420
     ggaatggatg tggtgaaggc gatcgagtcg aaaggatccg aagatggggc accgtcggct       480
     ccgtgcgtca ttgctgactg cggagaaatg aagtgatgct tctcgaagaa caacactgga       540
     gaattcgtct ttttattgga taaatatgat tttta                                  575
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