spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U32223; SV 1; linear; mRNA; STD; INV; 1698 BP.
XX
AC   U32223;
XX
DT   31-AUG-1995 (Rel. 45, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Caenorhabditis elegans tRNA-guanine transglycosylase (tgt) mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Caenorhabditis elegans
OC   Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea;
OC   Rhabditidae; Peloderinae; Caenorhabditis.
XX
RN   [1]
RP   1-1698
RA   Deshpande K.L., Katze J.R.;
RT   "C.elegans tgt";
RL   Unpublished.
XX
RN   [2]
RP   1-1698
RA   Deshpande K.L.;
RT   ;
RL   Submitted (24-JUL-1995) to the EMBL/GenBank/DDBJ databases.
RL   Kathryn L. Deshpande, Microbiology and Immunology, The University of
RL   Tennessee, Memphis, 858 Madison Ave., Memphis, TN 38163, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1698
FT                   /organism="Caenorhabditis elegans"
FT                   /chromosome="II"
FT                   /strain="Bristol N2"
FT                   /mol_type="mRNA"
FT                   /sex="hermaphrodite"
FT                   /dev_stage="mixed stage"
FT                   /clone_lib="Chris Martin sorted cDNA library. Vector:
FT                   lambda phage SHLX2"
FT                   /clone="cm11f11 5'"
FT                   /db_xref="taxon:6239"
FT   misc_feature    1..10
FT                   /note="trans-spliced leader SL1"
FT   CDS             17..1486
FT                   /codon_start=1
FT                   /gene="tgt"
FT                   /product="tRNA-guanine transglycosylase"
FT                   /db_xref="GOA:Q17361"
FT                   /db_xref="InterPro:IPR000626"
FT                   /db_xref="InterPro:IPR001394"
FT                   /db_xref="InterPro:IPR018200"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q17361"
FT                   /protein_id="AAA74956.1"
FT                   /translation="MPIVNVKWQKEKYVVEVDTSAPPMVFKAQLFALTQVVPERQKVVI
FT                   MGRTLGDDDWEGITIKENMTIMMMGSVGEIPKPPTVLEKKQANRDKQAEEISALYPCGL
FT                   ANLGNTCYFNSCVQMLKEVNELVLKPAEEMRIREHNDRLCHNLATLFNSLRDKDRALRS
FT                   KGEPIKPFAAILTLSDSFPQFEKFKQQDANECLVSIMSNVTRIYGLSGWNIESLFRIQT
FT                   ETTMKCLESDEVSEKKVERNNQLTCYVNQDVRFLQTGIKAGFEEEMTRNSEELNRDAKW
FT                   QKNTQISRLPKYLTVNINRFFYKESTKTNAKILKSVQFPMQLDTYDLCSQELKDKLVAR
FT                   RADIKLEEDAKLERELRKKVLDKEQGDKIFDDGVALPTAFEDDAGSNNSGFYDLKGIMT
FT                   HKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTVVDEEAILKTSGGGDWHSAYVLLYEAR
FT                   VIKQFPELPPAPVPTEVAADTAEPMEVSEKQ"
FT   polyA_site      1698
XX
SQ   Sequence 1698 BP; 503 A; 354 C; 395 G; 446 T; 0 other;
     caagtttgag gaaataatgc ctattgtcaa tgttaaatgg caaaaggaga aatatgttgt        60
     ggaagtcgac acctcagcac ctccgatggt gttcaaagcg caacttttcg ctttaacaca       120
     ggtggtacct gaacggcaga aggtagtgat tatgggacgc acactgggcg atgatgactg       180
     ggaaggaatc actatcaagg agaatatgac gattatgatg atgggatctg ttggtgaaat       240
     tccgaagcct cccactgtgc tcgaaaagaa acaagcaaac cgggataaac aagccgaaga       300
     gatttcagcg ctctatccat gtgggctcgc taatctcgga aacacgtgtt atttcaactc       360
     gtgtgtgcaa atgctcaaag aagtcaacga gctggttctg aagcctgccg aggagatgag       420
     aatccgtgag cataatgatc gtctgtgcca taatcttgct acactcttca atagtcttcg       480
     cgataaggat agagctcttc gcagcaaggg agagccgatc aagccgttcg cagcgattct       540
     tactctctcc gacagttttc ctcaattcga aaagttcaaa caacaggatg ccaacgaatg       600
     tctcgtatcg atcatgagca acgtcacgag aatttatgga ttgtccgggt ggaatattga       660
     atcacttttc cgaatccaga cagagaccac gatgaagtgt ctggaaagtg acgaagtttc       720
     tgagaaaaaa gtggagcgga acaatcagtt gacttgctat gtgaatcaag acgttcgatt       780
     tttgcaaact ggaattaaag ctggatttga agaggaaatg acgagaaata gtgaagaact       840
     taatagagat gcgaaatggc agaaaaatac tcaaatctcg cgtcttccaa aatacctcac       900
     tgtgaatatc aatcgattct tctacaagga aagcaccaag accaacgcga aaattctgaa       960
     atccgtccaa ttccccatgc aattagacac ctatgacttg tgcagtcagg aactcaagga      1020
     taaacttgtt gctcgacgag ctgatatcaa attggaggag gatgcgaagc tggagcgaga      1080
     gctgaggaag aaggtgttgg acaaagagca aggcgataag attttcgatg atggagttgc      1140
     tctgcctacc gctttcgaag atgatgcagg atcgaacaac tctggatttt atgatctcaa      1200
     gggaatcatg acccacaaag gccgatcctc tcaagatggt cactacgtcg cctggatgcg      1260
     atcatctgaa gacggcaagt ggcgtctttt tgacgatgag catgtcactg ttgtcgacga      1320
     ggaagccatt ctgaaaacgt ctggaggtgg tgattggcac agtgcctacg ttcttctcta      1380
     cgaggcccgt gtcatcaagc aattccctga acttccacca gcaccagtac cgactgaagt      1440
     tgccgctgat actgctgagc caatggaagt atcggagaag caataagact catattgtgc      1500
     ctcatttttt ccggttattc tccgaatttt cccttttcga aaaattattt attcctgttt      1560
     tcagtaattt tatcctaatt ttcagaccca attcaagtta tttgtatacc ttccccgttc      1620
     ttttttcttc gttccactgg aaaatgtctg tatttgatcg aatgtgatta ttattgataa      1680
     gtaaatcatc atcacgcc                                                    1698
//
spacer
spacer