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EBI DbfetchID U31902; SV 1; linear; genomic DNA; STD; PRO; 6380 BP. XX AC U31902; XX DT 06-SEP-1995 (Rel. 45, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Paracoccus denitrificans succinate dehydrogenase b-type cytochrome subunit DE (sdhC), succinate dehydrogenase hydrophobic membrane anchor (sdhD), DE succinate dehydrogenase flavoprotein subunit (sdhA), and succinate DE dehydrogenase iron-sulfur protein subunit (sdhB) genes, complete cds. XX KW . XX OS Paracoccus denitrificans OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Paracoccus. XX RN [1] RP 1-6380 RA Dickins M.A., Dhawan T., Gunsalus R.P., Schroeder I., Cecchini G.; RT "Cloning, sequencing, and expression of the succinate-ubiquinone RT oxidoreductase (SdhCDAB) operon from Paracoccus denitrificans"; RL Unpublished. XX RN [2] RP 1-6380 RA Cecchini G.; RT ; RL Submitted (19-JUL-1995) to the EMBL/GenBank/DDBJ databases. RL Gary Cecchini, Molecular Biology Div., VA Medical Center, University of RL California at San Francisco, 4150 Clement Street, San Francisco, CA 94121, RL USA XX FH Key Location/Qualifiers FH FT source 1..6380 FT /organism="Paracoccus denitrificans" FT /strain="ATCC 13543" FT /mol_type="genomic DNA" FT /db_xref="taxon:266" FT -35_signal 1676..1681 FT -10_signal 1700..1705 FT prim_transcript 1717..>6380 FT /gene="sdhCDAB" FT /experiment="experimental evidence, no additional details FT recorded" FT gene 1717..6380 FT /gene="sdhCDAB" FT gene 1850..2242 FT /gene="sdhC" FT CDS 1850..2242 FT /codon_start=1 FT /transl_table=11 FT /gene="sdhC" FT /product="succinate dehydrogenase b-type cytochrome FT subunit" FT /EC_number="1.3.5.1" FT /db_xref="GOA:Q59659" FT /db_xref="HSSP:1NEK" FT /db_xref="InterPro:IPR014361" FT /db_xref="UniProtKB/Swiss-Prot:Q59659" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA75175.1" FT /translation="MADVNRGNRPLSPHLQVYRLPLAAITSIMTRITGHALVAGIVLIT FT WWLVAAVTSPGAFACADWVVRSWLGFIILTGSMWALWYHLLAGLRHLFYDAGYGLEIEQ FT AHKSSQALIAGSVVLAVLTLIVFFVF" FT gene 2259..2648 FT /gene="sdhD" FT CDS 2259..2648 FT /codon_start=1 FT /transl_table=11 FT /gene="sdhD" FT /product="succinate dehydrogenase hydrophobic membrane FT anchor" FT /function="quinone binding peptide; probable part of b-type FT cytochrome" FT /EC_number="1.3.5.1" FT /note="ligands heme of b-type cytochrome moiety of FT succinate ubiquinone oxidoreductase" FT /db_xref="GOA:Q59660" FT /db_xref="InterPro:IPR014312" FT /db_xref="UniProtKB/Swiss-Prot:Q59660" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA75176.1" FT /translation="MRYITPRKAAEGLGSAHEGTQHHWAMTVSAVALTVLTPLFMIVVA FT RAIGLSQEQLLAYFGRPFPALITALFVIVGMVHFIKGTRIMIDDYFQGGTRKAAIIFSV FT IFGWAVIAAAVYALARMGLGAIVVL" FT gene 2658..4460 FT /gene="sdhA" FT CDS 2658..4460 FT /codon_start=1 FT /transl_table=11 FT /gene="sdhA" FT /product="succinate dehydrogenase flavoprotein subunit" FT /function="flavoprotein subunit ligating covalent FAD of FT complex II." FT /EC_number="1.3.5.1" FT /note="SdhA; contains a covalently bound FAD cofactor and FT the active site of complex II" FT /db_xref="GOA:Q59661" FT /db_xref="HSSP:1NEK" FT /db_xref="InterPro:IPR014006" FT /db_xref="UniProtKB/Swiss-Prot:Q59661" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA75177.1" FT /translation="MAAYKYETHEYDVVVVGAGGAGLRATLGMAEQGLRTACVTKVFPT FT RSHTVAAQGGIAASLSNMGPDNWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEH FT YGVPFSRTEEGKIYQRPFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKEKAE FT FFIEYFALDLIITDGACTGVVCWKLDDGTIHVFNAKMVVLATGGYGRAYFSATSAHTCT FT GDGGGMVARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLTNSEGERFMERYAP FT TYKDLASRDVVSRCITIEIREGRGVGPHKDHMHLNLMHLPPESLAERLPGISESAKIFA FT GVDVTREPIPILPTVHYNMGGIPTNYWGEVLNPTQDNPDQVFPGLMAVGEAGCASVHGA FT NRLGSNSLIDLVVFGRAAAIRAGQVIDREAQIPTTNKEQVDKALDRFDRIRNADGSVST FT ADLRLEMQRTMQADAAVFRTDKTLAEGVDKMRVIAGKLSDLKVTDRSLIWNSDLMETLE FT LTNLMPNALATIVAAEARKESRGAHAHEDYPERDDANWRKHSLAWIEGNDVKLAYRPVH FT LEPLTRQDEGGIDLKKIAPKARVY" FT gene 5213..5992 FT /gene="sdhB" FT CDS 5213..5992 FT /codon_start=1 FT /transl_table=11 FT /gene="sdhB" FT /product="succinate dehydrogenase iron-sulfur protein FT subunit" FT /EC_number="1.3.5.1" FT /note="iron-sulfur subunit of complex II; contains FT iron-sulfur clusters [2Fe-2S], [4Fe-4S], and [3Fe-4S]" FT /db_xref="GOA:Q59662" FT /db_xref="HSSP:1NEK" FT /db_xref="InterPro:IPR004489" FT /db_xref="UniProtKB/Swiss-Prot:Q59662" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA75178.1" FT /translation="MVQLTLPKNSRMRVGKTWPKPEGATNVRRFNIYRWDPDTGENPRI FT DTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNHLACIYGM FT DEIKGDVNIYPLPHMPVVKDLVPDLTHFYAQHASVQPYLITETPTPDKEWRQSIEDRKK FT LDGLYECVMCASCSTACPSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDSLEDPF FT KLYRCHTIMNCTNTCPKGLNPAKAIASIKHMMVDRIV" XX SQ Sequence 6380 BP; 1089 A; 2129 C; 2060 G; 1102 T; 0 other; ccacccggca cctccgccac ccgcaactga ccggctttgc cctgtgggcc tttgcgcatc 60 tggtgccgaa cggcgacctg cccagtttcg tgctgttcgg cgggctgctc gtctgggcgc 120 tggtcgagat ggtcgtcatc aaccgcgcgc agccggactg gacgccgccc gccgggcccc 180 ttcccggcgc gcaaggagat catggcggtg gccggcgccg tcgtcgtcct gctggtggtc 240 gggctgatcc acgcctggct cggctataac ccgttcggag gctgagatgc cgaaaatcta 300 tcgcctgctg accgaggacg acacctcggc cttctgccac aaggtcagcg aggcgctgtc 360 caagggctgg gaactgcacg gcggccccgc ctacgccttt gacgcggcgc gcggcgtgat 420 gcgctgcgcc caggccgtca ccaagcagat cgatgccgat taccaccccg agatgaagct 480 gggccagcaa tagggaacca tcatgagcaa gaccaatccg ggccgtttct tcgaggatta 540 ccgcatcggc caggtgatcc gccacgccgt gccgcgcacc gtggccgagg gcgagcgcgc 600 gctttaccac gcgctctatc cggcccggca tgcgctttat tcctcggacg agttcgcggc 660 ggcctcgggg ctggaaggca gcccgatgga cgatctgatc gcctttcaca tcgtcttcgg 720 caagacggtg cccgatatca gcctgaacgc ggtggcgaac ctgggctatg ccgaggggcg 780 ctggctgaag ccggtctggc cgggcgacac gctgcgcgcg gaatccgagg tgatcgggct 840 caaggagaac tcgaacggca agtccggcgt ggtctgggtc cgcacccgcg ggctgaacca 900 gctggacgag gtggtgctgg aatatgtgcg ctgggtcatg gtgcgcaagg gcgatgccgc 960 ggcgcccgcg cccgagccgg tggcgccgga actggcgaaa tcggtcgcgc ccgccgatct 1020 ggtgctgccc gaggggctgg atttcctgca atacgatttc gacctggccg gcgagccgca 1080 tcgttggggc gactaccaga tcggcgaggt catcgaccat gtcgacggcg tcaccatcga 1140 ggaggccgag cacatgctgg ccacccggct gtggcagaac accgccaagg tgcatttcga 1200 cgccaccttc cgcgaggacg gccagcggct gatctatggc ggccacgtca tcagcatggc 1260 ccgcgcgctc agcttcaatg ggctggccaa tgcgcagatg atcgtggcgc tgaacggcgg 1320 cgcccatgcc aatccctgct ttgccggcga tacgatccgc gcctggtccg aggttctgga 1380 caaggccgac acccatgcgc cgggcgtcgg cgcgatccgg ttgcggctgg tggcgcacaa 1440 ggggcgggcc ggtgatcacg ccctgcgcgg cgaggacgga aaatacgccc cgcaggtgct 1500 gctggacctg gattactggg ccctgatgcc gaagtgaccc ctcggaggcc cggcgccgcc 1560 agccccttgg tcgcggcggc gcgggtggcg aacatgacaa aatccctcgg ttatcccggg 1620 aaatcgggtg agtccgtcct gataccgcaa tcattcggag gggttttcgg gcgcatgtga 1680 tcacagctgc cgtttgcgtg atcacaaaaa tggaaaatct gccgatatcc gccttacgtc 1740 tggcatccgc ccgtgacaga tgcgacaaga cgactaaaag caaacccaat ttcggccagc 1800 cctcgccgcc agccgtcgcg tgcggggcct gaacgcagga gagcgcatca tggctgacgt 1860 caaccggggc aaccggccac tgtcaccgca tttgcaggtc tatcgcctgc cacttgccgc 1920 aatcacttcg atcatgaccc gtatcaccgg ccacgccctg gtcgccggga tcgtgctgat 1980 cacctggtgg ctggtcgctg ccgtgacctc gcccggcgcc ttcgcctgcg ccgactgggt 2040 ggtgcggtcc tggctgggct tcatcatcct gaccggctcg atgtgggcgc tgtggtatca 2100 cctgctcgcc gggctgcgcc acctgttcta cgacgccggc tacgggctgg agatcgagca 2160 ggcgcacaag tcgagccagg cgctgatcgc gggttcggtc gtgctggccg tgctgacgct 2220 gatcgtcttt ttcgtgttct gaggaaaggg cagggatcat gcgttacatc accccccgca 2280 aagccgccga aggcctgggc tcggcccacg aaggcaccca gcatcactgg gccatgaccg 2340 tctcggccgt ggcgctgacc gtgctgacgc cgctgttcat gatcgtcgtg gcccgcgcca 2400 tcggcctgtc gcaggaacag ttgctggcct atttcggccg tcccttcccg gcgctcatca 2460 ccgctctgtt cgtgatcgtg ggcatggtcc acttcatcaa gggcacgcgg atcatgatcg 2520 acgactattt ccagggtggc acgcgcaagg cggccatcat cttttccgtc atcttcggct 2580 gggcggtcat cgccgcagcc gtctatgcgc tggcccggat gggccttggc gcgatcgtcg 2640 tcctctgagg ttccgccatg gctgcttaca aatacgaaac gcacgaatat gacgtcgtgg 2700 tcgtcggtgc cggtggcgcg ggcctgcgcg cgacgctggg catggccgaa caggggttgc 2760 gcaccgcctg cgtgaccaag gttttcccga cccgttcgca cacggtcgcg gcgcagggcg 2820 gcatcgccgc ctcgctgtcg aacatgggcc cggacaactg gcagtggcac atgtatgaca 2880 ccgtcaaggg ctcggactgg ctgggcgaca ccgacgccat ggaatacctg gcgcgcgagg 2940 cccccaaggc ggtctatgag ctggagcatt acggcgtgcc cttctcgcgc accgaggaag 3000 gcaagatcta tcagcgcccc ttcggcggcc acaccaccga gttcggcgaa ggcccgccgg 3060 tgcagcgcac ctgcgccgcc gccgaccgca ccggccacgc gatcctgcac acgctctatg 3120 gccagtcgct gaaggaaaag gccgagttct tcatcgaata tttcgcgctg gacctgatca 3180 tcaccgatgg cgcctgcacc ggcgtggtgt gctggaagct ggacgacggc acaatccacg 3240 tcttcaacgc caagatggtg gtgctggcga ccggcggcta tggccgcgcc tatttctcgg 3300 cgacctcggc ccatacctgc accggcgacg gcggaggcat ggtggcacgc gccggcttgc 3360 ccctgcagga catggagttc gtgcagttcc acccgaccgg catctacggt tcgggctgcc 3420 tcatcaccga aggcgcgcgc ggcgagggcg gctacctgac caacagcgag ggtgagcgct 3480 tcatggagcg ttacgcgccg acctacaagg atctcgccag ccgcgacgtg gtcagccgct 3540 gcatcaccat cgagatccgc gagggccgcg gcgtcggccc gcacaaggat cacatgcacc 3600 tgaacctgat gcacctgccg ccggaaagcc tggccgagcg gctgccgggc atctcggaat 3660 cggccaagat ctttgccggc gtggacgtga cgcgcgagcc gatcccgatc ctgccgaccg 3720 tgcattacaa catgggcggc atccccacca actattgggg cgaggtgctg aatccgacgc 3780 aggacaatcc cgaccaggtc ttccctggcc tgatggcggt gggcgaggcc ggctgcgcct 3840 cggtccatgg cgcgaaccgg ctgggctcga actcgctgat cgacctcgtg gtctttggcc 3900 gtgccgccgc gatccgcgcc ggccaggtga tcgaccgcga ggcgcagatc cccacgacca 3960 acaaggagca ggtggacaag gcgctggacc gtttcgaccg catccgcaat gccgacggct 4020 cggtgtcgac tgccgatctg cggcttgaga tgcagcgcac catgcaggcc gacgccgccg 4080 tgttccgcac cgacaagacg ctggccgaag gcgtcgacaa gatgcgggtg atcgcgggca 4140 agctcagcga cctcaaggtc acggatcgca gcctgatctg gaacagcgac ctgatggaga 4200 cgctggaact gaccaacctg atgcccaacg ccctggcgac catcgtcgcg gccgaggcgc 4260 gcaaggaaag ccgcggcgcc catgcccatg aagactaccc cgagcgggat gatgccaact 4320 ggcgcaagca ctcgcttgcc tggatcgaag gcaacgatgt taaactggcc tatcggcccg 4380 tgcatctcga acctctgacc aggcaagacg aaggcgggat cgacctgaaa aagatcgcac 4440 ccaaagcgag ggtttattga tgcgtcttcc cctgatcctg accgccgccg cgctggccct 4500 ttcgggctgc gtggtccaga accccggcat ggcgccggtc gcgcctctgc cggtgccgca 4560 ggtgacgccg ccggatgcgg cgatccgctc ctcggcgcgt gtcgtcgtca accgcgagat 4620 ggcgcggcgc ctgcccggcg ccaatgttgc gccctatacc gattgcgtgt tgcagaacgc 4680 cacctcggcg gaactggcca gcatcgccgc tgccggtgcg gcaggggctg ggaatgcggt 4740 ggccgccatc gttggccgcc cggcgaccac gcaatgcatc gccggtgccg cggcggcggc 4800 caagcaggcc gcctgatggc cgggcgcggc gcgcttggcc ttggctttgc cccggcgctg 4860 ctggggctgg cggcctgcgc gcccgcgccc gtgcggattt cggtcgcaga ggccgaacgc 4920 ctctgcatgg tccaggcgtt ggacgcccgg gcaccgcgca ccgaggtcgg cttgggcatc 4980 ggctcgcacg gctatcgggg cggcttcgtg cgggtcgacc tgtcctcgga ccagatcctg 5040 ggccgcgatc cgtcccaggt cttcaacgaa tgcgtccgcc gccgctcggg gcaacagcct 5100 acgcggcctc tttaccaaca accgggctgg agggtgaatt gacgccctcc gccccagcca 5160 ccgcatgacg gcctagtcgc aagatgacgg tctgaccacc aggagttacc caatggtcca 5220 acttaccctt cccaagaaca gccgcatgcg ggtcggcaag acctggccga aacccgaagg 5280 cgccacgaat gtccgccgct tcaacatcta tcgctgggac cccgataccg gcgagaaccc 5340 gcgcatcgac acctatttcg tcgacatgga caaatgcggt cccatggtgc tggacgcgct 5400 gatcaagatc aagaacgaga tcgacccgac gctgaccttc cgccgttcct gccgagaggg 5460 catctgcggc tcctgcgcca tgaatatcga cggcggcaac catcttgcct gcatctatgg 5520 catggatgag atcaagggcg acgtgaacat ctacccgctg ccgcatatgc cggtggtcaa 5580 ggacctggtg ccggacctga cgcatttcta tgcccagcac gcctcggtcc agccctatct 5640 gatcaccgag acgccgaccc ccgacaagga atggcgccag tcgatcgaag accgcaagaa 5700 gctggacggc ctctacgaat gtgtgatgtg cgccagctgc tcgaccgcct gtcccagcta 5760 ttggtggaac ggcgatcgct atctgggtcc ggcggccttg ttgcacgcct atcgctggat 5820 catcgactcg cgcgacgaag ccacgggcga gcgtctggac tcgcttgagg atccgttcaa 5880 gctgtatcgc tgccacacga tcatgaactg caccaacacc tgccccaagg ggctgaaccc 5940 ggccaaggcg atcgcctcga tcaagcacat gatggtggac cggatcgtct gatttgcatg 6000 tcggtcatgg ccggtatgcc atgatatgcc gtttgacgcc gcgtcgcaga gctggatttt 6060 tctgcggtgc ggcgttatct tttctgacgg ggagagcaca cttcgacccg gagattttcg 6120 gatgaaaacc cttgccgaaa cgcaaaaaca gaccgccaag ctggccgtgc tgaagccggc 6180 caaggcagag agccacgcgg cgctggccgt gctggagcag atgtacggtt atttcagctt 6240 cgatccgatg cccttggaag ccgacatccg tcacgccgcc tgaacgcggt cttctcgctc 6300 gtcatcgcgg gccttcctgc gcggcttcgc ggccgcgctt ttgtcattcc cgcaaggcgt 6360 ttcgttcgcg ctttcctgag 6380 // |
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