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EBI DbfetchID U27585; SV 1; linear; genomic DNA; STD; PRO; 2319 BP. XX AC U27585; XX DT 10-AUG-1995 (Rel. 44, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 4) XX DE Cytophaga heparina heparinase II (HepB) gene, complete cds. XX KW . XX OS Pedobacter heparinus OC Bacteria; Bacteroidetes; Sphingobacteria; Sphingobacteriales; OC Sphingobacteriaceae; Pedobacter. XX RN [1] RP 1-2319 RX PUBMED; 8702264. RA Su H., Blain F., Musil R.A., Zimmermann J.J., Gu K., Bennett D.C.; RT "Isolation and expression in Escherichia coli of hepB and hepC, genes RT coding for the glycosaminoglycan-degrading enzymes heparinase II and RT heparinase III, respectively, from Flavobacterium heparinum"; RL Appl. Environ. Microbiol. 62(8):2723-2734(1996). XX RN [2] RP 1-2319 RA Tkalec A.L.; RT ; RL Submitted (24-MAY-1995) to the EMBL/GenBank/DDBJ databases. RL Ana L. Tkalec, IBEX Technologies, 5485 Pare, Montreal, Quebec, H4P 1P7, RL Canada XX FH Key Location/Qualifiers FH FT source 1..2319 FT /organism="Pedobacter heparinus" FT /mol_type="genomic DNA" FT /db_xref="taxon:984" FT sig_peptide 1..75 FT /gene="HepB" FT CDS 1..2319 FT /codon_start=1 FT /transl_table=11 FT /gene="HepB" FT /product="heparinase II protein" FT /db_xref="InterPro:IPR012480" FT /db_xref="PDB:2FUQ" FT /db_xref="PDB:2FUT" FT /db_xref="PDB:3E7J" FT /db_xref="PDB:3E80" FT /db_xref="UniProtKB/TrEMBL:Q46080" FT /protein_id="AAB18277.1" FT /translation="MKRQLYLYVIFVVVELMVFTTKGYSQTKADVVWKDVDGVSMPIPP FT KTHPRLYLREQQVPDLKNRMNDPKLKKVWADMIKMQEDWKPADIPEVKDFRFYFNQKGL FT TVRVELMALNYLMTKDPKVGREAITSIIDTLETATFKPAGDISRGIGLFMVTGAIVYDW FT CYDQLKPEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGHASEWMIMRDLLSVGIAIYDE FT FPEMYNLAAGRFFKEHLVARNWFYPSHNYHQGMSYLNVRFTNDLFALWILDRMGAGNVF FT NPGQQFILYDAIYKRRPDGQILAGGDVDYSRKKPKYYTMPALLAGSYYKDEYLNYEFLK FT DPNVEPHCKLFEFLWRDTQLGSRKPDDLPLSRYSGSPFGWMIARTGWGPESVIAEMKVN FT EYSFLNHQHQDAGAFQIYYKGPLAIDAGSYTGSSGGYNSPHNKNFFKRTIAHNSLLIYD FT PKETFSSSGYGGSDHTDFAANDGGQRLPGKGWIAPRDLKEMLAGDFRTGKILAQGFGPD FT NQTPDYTYLKGDITAAYSAKVKEVKRSFLFLNLKDAKVPAAMIVFDKVVASNPDFKKFW FT LLHSIEQPEIKGNQITIKRTKNGDSGMLVNTALLPDAANSNITSIGGKGKDFWVFGTNY FT TNDPKPGTDEALERGEWRVEITPKKAAAEDYYLNVIQIADNTQQKLHEVKRIDGDKVVG FT VQLADRIVTFSKTSETVDRPFGFSVVGKGTFKFVMTDLLPGTWQVLKDGKILYPALSAK FT GDDGPLYFEGTEGTYRFLR" XX SQ Sequence 2319 BP; 661 A; 470 C; 562 G; 626 T; 0 other; atgaaaagac aattatacct gtatgtgatt tttgttgtag ttgaacttat ggtttttaca 60 acaaagggct attcccaaac caaggccgat gtggtttgga aagacgtgga tggcgtatct 120 atgcccatac cccctaagac ccacccgcgt ttgtatctac gtgagcagca agttcctgac 180 ctgaaaaaca ggatgaacga ccctaaactg aaaaaagttt gggccgatat gatcaagatg 240 caggaagact ggaagccagc tgatattcct gaagttaaag actttcgttt ttattttaac 300 cagaaagggc ttactgtaag ggttgaacta atggccctga actatctgat gaccaaggat 360 ccaaaggtag gacgggaagc catcacttca attattgata cccttgaaac tgcaactttt 420 aaaccagcag gtgatatttc gagagggata ggcctgttta tggttacagg ggccattgtg 480 tatgactggt gctacgatca gctgaaacca gaagagaaaa cacgttttgt gaaggcattt 540 gtgaggctgg ccaaaatgct cgaatgtggt tatcctccgg taaaagacaa gtctattgtt 600 gggcatgctt ccgaatggat gatcatgcgg gacctgcttt ctgtagggat tgccatttac 660 gatgaattcc ctgagatgta taacctggct gcgggtcgtt ttttcaaaga acacctggtt 720 gcccgcaact ggttttatcc ctcgcataac taccatcagg gtatgtcata cctgaacgta 780 agatttacca acgacctttt tgccctctgg atattagacc ggatgggcgc tggtaatgtg 840 tttaatccag ggcagcagtt tatcctttat gacgcgatct ataaacgccg ccccgatgga 900 cagattttag caggtggaga tgtagattat tccaggaaaa aaccaaaata ttatacgatg 960 cctgcattgc ttgcaggtag ctattataaa gatgaatacc ttaattacga attcctgaaa 1020 gatcccaatg ttgagccaca ttgcaaattg ttcgaatttt tatggcgcga tacccagttg 1080 ggaagtcgta agcctgatga tttgccactt tccaggtact caggatcgcc ttttggatgg 1140 atgattgccc gtaccggatg gggtccggaa agtgtgattg cagagatgaa agtcaacgaa 1200 tattcctttc ttaaccatca gcatcaggat gcaggagcct tccagatcta ttacaaaggc 1260 ccgctggcca tagatgcagg ctcgtataca ggttcttcag gaggttataa cagtccgcac 1320 aacaagaact tttttaagcg gactattgca cacaatagct tgctgattta cgatcctaaa 1380 gaaactttca gttcgtcggg atatggtgga agtgaccata ccgattttgc tgccaacgat 1440 ggtggtcagc ggctgcccgg aaaaggttgg attgcacccc gcgaccttaa agaaatgctg 1500 gcaggcgatt tcaggaccgg caaaattctt gcccagggct ttggtccgga taaccaaacc 1560 cctgattata cttatctgaa aggagacatt acagcagctt attcggcaaa agtgaaggaa 1620 gtaaaacgtt catttctatt cctgaacctt aaggatgcca aagttccggc agcgatgatc 1680 gtttttgaca aggtagttgc ttccaatcct gattttaaga agttctggtt gttgcacagt 1740 attgagcagc ctgaaataaa ggggaatcag attaccataa aacgtacaaa aaacggtgat 1800 agtgggatgt tggtgaatac ggctttgctg ccggatgcgg ccaattcaaa cattacctcc 1860 attggcggca agggcaaaga cttctgggtg tttggtacca attataccaa tgatcctaaa 1920 ccgggcacgg atgaagcatt ggaacgtgga gaatggcgtg tggaaatcac tccaaaaaag 1980 gcagcagccg aagattacta cctgaatgtg atacagattg ccgacaatac acagcaaaaa 2040 ttacacgagg tgaagcgtat tgacggtgac aaggttgttg gtgtgcagct tgctgacagg 2100 atagttactt ttagcaaaac ttcagaaact gttgatcgtc cctttggctt ttccgttgtt 2160 ggtaaaggaa cattcaaatt tgtgatgacc gatcttttac ccggtacctg gcaggtgctg 2220 aaagacggaa aaatacttta tcctgcgctt tctgcaaaag gtgatgatgg acccctttat 2280 tttgaaggaa ctgaaggaac ctaccgtttt ttgagataa 2319 // |
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