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EBI DbfetchID U27183; SV 1; linear; genomic DNA; STD; PRO; 4400 BP. XX AC U27183; XX DT 18-MAR-1996 (Rel. 47, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Thermoanaerobacterium sp. endoxylanase precursor (xynA) gene, complete cds. XX KW . XX OS Thermoanaerobacterium OC Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; OC Thermoanaerobacterales Family III. Incertae Sedis. XX RN [1] RP 1-4400 RX PUBMED; 8626279. RA Liu S.Y., Gherardini F.C., Matuschek M., Bahl H., Wiegel J.; RT "Cloning, sequencing, and expression of the gene encoding a large RT S-layer-associated endoxylanase from Thermoanaerobacterium sp. strain RT JW/SL-YS 485 in Escherichia coli"; RL J. Bacteriol. 178(6):1539-1547(1996). XX RN [2] RP 1-4400 RA Liu S.Y.; RT ; RL Submitted (16-MAY-1995) to the EMBL/GenBank/DDBJ databases. RL Shu-Ying Liu, University of Georgia, Department of Microbiology, Athens, GA RL 30602, USA XX CC NCBI gi: 1222526 XX FH Key Location/Qualifiers FH FT source 1..4400 FT /organism="Thermoanaerobacterium" FT /strain="JW/SL-YS 485" FT /mol_type="genomic DNA" FT /db_xref="taxon:28895" FT -35_signal 185..189 FT /gene="xynA" FT -10_signal 210..215 FT /gene="xynA" FT RBS 235..240 FT /gene="xynA" FT sig_peptide 250..345 FT /gene="xynA" FT CDS 250..4296 FT /codon_start=1 FT /transl_table=11 FT /gene="xynA" FT /product="endoxylanase precursor" FT /EC_number="3.2.1.8" FT /db_xref="GOA:Q60043" FT /db_xref="HSSP:1I8A" FT /db_xref="InterPro:IPR001000" FT /db_xref="InterPro:IPR001119" FT /db_xref="InterPro:IPR003305" FT /db_xref="InterPro:IPR008960" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR010502" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR015922" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q60043" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAC43719.1" FT /translation="MKSIVNRVVSIVTALIMIFGTSLFSQHIRAFADDTNTNLVSNGDF FT ETGTIDGWIKQGNPTLEVTTEQAIGQYSMRVTGRTQTYEGPAYSFLGKMQKGESYNVSL FT KVRLVSEQNSSNPFITVTMFREDDDGKHYDTIVCQKQVSEDSWTTVSGTYTLDYTGTLK FT TLYMYVESPDPTLEYYIDDVVVTPQNPIQVGNVITNGTFENGNTSGWVGTGSSVVKAVY FT GVSHIGGYSLLTTGRTANWNGPSYDLTAKIVPGQQHNVDFWVKFVNGNDTEQIKATVKS FT TSDKGNYIRVNDFANVNRGEWTEIKGSFTLPVADYSGVSIYVESRNPTLEKNNDDFSVK FT GEISNKQITIQNDIPDLYSVLKDYFPIGVAVDPSRLNDAEAHAQLTARHFNMLAAANAM FT KPESLQPTEGNFAFDNADKIVDYAIAHNMKMRGHTLLWHNQVPDWVFQEPSDPSKPSSR FT DLLRQRLSTHITAVLEHIQTKCGSLDPIGGWDVVNEVLDESGNLRNPTWLQIIGPDYID FT KASEYAHEGDPSMTSFITYHNIENGVKTQAMYDLVKKLKNEGVPINGIGMQMHISINSN FT IDNIKASIEKLASLGVEIQVTELDMNMNGDVSNDALLKQARLYKQLFDLFKAEKHYITD FT VVFRGVSDDVSWLSKPNAPLLFDSKLQAKPAYWAIVDPGKAIPDIQSAKALEGSPTIGA FT NVDSSWKLVKPLDANTYVKGTIGATAAVKSMWDTKNLYLLVQISDNTPSNNDGIEISVD FT KNDNKSTTYESDDEHYIAKRDGTGSSNITKYVMSNADGYVAQIAIPIEDISPVLNDKLG FT FDIRINDDQGSGNVTAITAWNDYTNSQDTNTAYFGDLVLSKPAQIATAIYGTPVIDGKV FT DGVWNNPEAISTNTWVLGSNGATATAKMMWDDKYLYILADVTDNNLNKSSVNPYEQDSV FT EVFVDQNNDKTTYYENDDGQLRVNYDNEQSFGGSTNSNGFKSATSLTQNGYIVEEAIPW FT TSITPLNGTIIGFDLQVNDADENGKRTGIVTWCDPSGNSWQATSGFGNLMLTGKPSVIK FT SDNASIALTEDALNRNQIQCGVDVSIKDTWKANVTNYVTLANVVDMTISGSSGNVALPK FT PVEVTLNISIANDPRRVAVYYYNPATNQWEYVGGKVDASSGTMTFDATHFSQYAAFEYD FT ETFNDIKDNWPKDVIEVLASRHIVEGMTDTQYEPNKTVARAEFTAMILRLLNIEEEAYS FT GEFSDVKSGDWYADAIEAAYKAGIIEGDGKNARPYDSITREEMTAIPMRAYEMLTQYRE FT ENIGATTFSDDKSISDWARNVVANAAKLGIVNGEPNNVFAPKGNATRAEAAAIICGLLE FT KTNNL" FT terminator 4302..4326 FT /gene="xynA" XX SQ Sequence 4400 BP; 1548 A; 676 C; 971 G; 1205 T; 0 other; ccggaaagca taagacctgc tatgtcggta gtgtcagtgg ttcctattat gatggtttat 60 ccattcttgc agaagtattt tgtaaagggt ttaaccattg gcagtgttaa gggttagtac 120 atctttggtt ttttataaat gctgaaaggg gggaaaatta tgtatactta ttaggcgaaa 180 gtttttaatt gcgaggtgat aataaatcgt atattcaatt aagtaaatgt actgagggag 240 gaagtaagaa tgaagagtat tgtaaacaga gttgtatcta tcgttacagc tttaataatg 300 atttttggga catcactgtt ttcacaacac ataagggcat ttgctgatga cactaataca 360 aatctggttt ctaatgggga ctttgagaca ggcacaattg atggctggat taagcaaggt 420 aatcctacat tagaagtaac tactgaacaa gcaattgggc aatacagtat gagagttacg 480 ggtagaacac agacatatga aggacctgca tatagctttt taggaaaaat gcagaaaggt 540 gaatcatata atgtatcgct taaagttaga cttgtttctg aacaaaattc atctaatcct 600 tttattaccg tgactatgtt tagagaagat gacgatggca agcattatga tacgatagtt 660 tgtcaaaaac aagtttctga agattcatgg actactgtaa gcgggactta tacattagat 720 tatactggaa cactgaagac attatacatg tatgtagaat cacccgatcc aacgctggaa 780 tactatattg atgatgttgt agtgacacca caaaatccaa tacaagtagg aaatgtgatt 840 accaatggaa cttttgaaaa tggaaatact tcaggatggg ttgggacagg ctcatctgtt 900 gttaaggcag tgtatggagt gtctcatatc ggaggttata gtttattgac gacagggaga 960 acagctaatt ggaatggtcc tagctatgat ttgactgcca aaatagtacc aggtcaacaa 1020 cacaatgttg atttttgggt gaaatttgtt aatggcaatg atacagaaca aataaaggct 1080 actgttaaat cgacttctga caaaggcaat tatatacgag ttaatgattt tgcaaatgta 1140 aatagaggcg aatggacaga aataaaaggc agttttactt tacctgtggc agattacagc 1200 ggtgtcagca tctatgtaga atctcgaaat cctactttag agaaaaacaa tgatgatttt 1260 tctgtaaaag gtgaaatttc aaataaacag attacaatac aaaatgatat tccggattta 1320 tattcagtac tcaaagatta tttccccatc ggtgttgcag ttgatccgag tagattaaat 1380 gatgctgagg cccatgctca attgactgct agacatttta atatgcttgc tgcagcaaat 1440 gccatgaaac cggaaagctt gcagcctaca gagggaaact ttgcctttga taatgctgat 1500 aagattgttg attatgcaat agcacataat atgaagatga gaggtcatac attgctttgg 1560 cataatcagg ttccggattg ggttttccag gagccatctg atccgtctaa accatcatca 1620 agggatctgc tgcgtcaaag attaagcaca cacataacgg ctgtgttaga gcatattcaa 1680 actaaatgcg ggtctctcga tcctataggc ggatgggatg ttgtaaatga ggttcttgat 1740 gagagtggca atttaagaaa tcctacgtgg ttacaaatta taggacctga ttatatagac 1800 aaagcctccg aatatgcgca tgagggagat ccatctatga catcgtttat tacgtatcac 1860 aacatcgaaa atggcgttaa aacacaggca atgtatgatt tagtgaaaaa gttaaaaaat 1920 gaaggtgtgc ctataaacgg aataggcatg caaatgcaca taagcataaa ttcaaatata 1980 gacaatataa aagcttctat agaaaaactt gcatcattag gtgtggaaat acaggtaact 2040 gaattagata tgaacatgaa tggtgatgta tctaacgacg cattgcttaa gcaagcgaga 2100 ttgtataaac aattatttga cttgttcaaa gcagaaaaac actatataac tgatgtagtt 2160 tttcggggag tctcagatga tgtaagttgg cttagtaagc caaatgctcc gctacttttt 2220 gattcaaagt tacaggcaaa gccagcatac tgggcaattg tagatccagg caaagccata 2280 cctgacattc aatctgcaaa agctttagaa ggatcaccga cgattggtgc aaatgttgat 2340 agttcttgga aacttgtcaa accattggat gctaatactt atgtgaaagg aactattgga 2400 gcaactgctg ctgttaaatc tatgtgggat actaaaaact tatatttgtt agtacaaatt 2460 tcagacaata ctccatctaa taatgatggc atcgagattt ctgtggataa gaatgacaac 2520 aaatctacta cctatgaaag tgacgatgaa cattatatag ctaagaggga tggtacaggg 2580 agttcaaata ttacaaagta tgtaatgtct aatgctgatg gctatgtagc acagatagct 2640 attccaattg aagacattag ccctgtgctg aatgataaac tcggatttga tatcagaata 2700 aatgatgacc aaggcagtgg caatgtaact gcgataacag cttggaatga ttatacaaac 2760 agtcaagata ctaatacggc atatttcgga gatttagtat tatcaaaacc tgcacagatt 2820 gcaacagcta tatatggcac tcctgttatt gacgggaaag tagatggcgt ttggaataat 2880 cctgaagcta tttcgacaaa tacatgggtc ttgggttcaa atggtgctac tgcaacagca 2940 aaaatgatgt gggacgataa atatctttat atattggcag atgtaacaga taacaattta 3000 aataaatcca gtgtaaatcc ttatgaacag gattctgtgg aagtttttgt agatcagaat 3060 aatgataaga caacttatta tgaaaatgat gatgggcagc ttagagttaa ctatgataat 3120 gaacaaagtt ttggaggaag cactaattca aatggattta agtcggcaac aagtcttaca 3180 caaaatggat atattgtaga agaagctatt ccttggacga gtattactcc gttaaatggt 3240 actatcatag ggtttgactt gcaagttaac gatgcagatg aaaatggtaa gaggacaggt 3300 attgtcacat ggtgtgatcc aagcggaaat tcatggcaag ctacttctgg atttggaaac 3360 ttgatgctta caggtaagcc atctgtcata aaatcagaca atgcatcgat agcactcacg 3420 gaagatgcac ttaatcgaaa ccagatacaa tgcggtgtcg atgtatcaat aaaagacaca 3480 tggaaagcca atgtgacaaa ttatgtgacg cttgctaatg tagtagatat gacaataagc 3540 ggtagcagtg ggaatgtagc attgccaaaa ccagtagagg tgacattaaa tatatcaata 3600 gctaacgatc caaggagagt agcagtttac tactacaacc cagcaacaaa tcaatgggag 3660 tacgtagggg gtaaagtaga cgcatcatct ggaacaatga cattcgatgc gacgcacttt 3720 tcgcaatatg cagcatttga gtatgacgag acatttaatg acataaaaga caattggccg 3780 aaagacgtaa tagaagtatt agcatcaagg catatagtag aagggatgac agatacccag 3840 tatgaaccaa acaagacagt ggcgagagca gaatttacag caatgatact gaggcttcta 3900 aacatagaag aagaagcata cagtggagaa tttagcgatg taaaaagtgg agactggtat 3960 gcagacgcga tagaagcagc atacaaagca gggataatcg aaggtgacgg aaagaacgca 4020 aggccatatg acagcataac aagagaagag atgactgcaa tacccatgag ggcatacgag 4080 atgctgacac agtacagaga agagaatata ggtgcgacaa catttagcga cgacaaatcc 4140 ataagcgatt gggcaagaaa tgtagtggca aatgcagcga aattaggaat agtaaatggt 4200 gagccaaata acgtatttgc acctaaagga aatgccacga gagcagaagc agcagctatc 4260 atatgcggct tattagaaaa aacaaataat ctttaagtag agaggcaaga ggaataatct 4320 tgcctctgcc tttttacttt gtgataattt agactgttat ttctattgat atgtcgtttt 4380 tatctaaatt gaaatgaaat 4400 // |
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