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EBI DbfetchID U26552; SV 1; linear; genomic DNA; STD; VRL; 2166 BP. XX AC U26552; XX DT 08-JUN-1996 (Rel. 48, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Bovine rotavirus C VP3 gene, complete cds. XX KW . XX OS Bovine group C rotavirus OC Viruses; dsRNA viruses; Reoviridae; Rotavirus. XX RN [1] RP 1-2166 RA Jiang B., Gentsch J.R., Tsunemitsu H., Saif L.J., Glass R.I.; RT "Sequence analysis of VP3 and VP4 genes of a bovine group C rotavirus: RT molecular evidence for a new P type"; RL Unpublished. XX RN [2] RP 1-2166 RA Jiang B., Gentsch J.R., Tsunemitsu H., Saif L.J., Glass R.I.; RT ; RL Submitted (08-MAY-1995) to the EMBL/GenBank/DDBJ databases. RL Baoming Jiang, Lederle-Praxis Biologicals, American Home Product RL Cooperation, 211 Bailey Road, West Henrietta, NY 14486, USA XX FH Key Location/Qualifiers FH FT source 1..2166 FT /organism="Bovine group C rotavirus" FT /chromosome="segment 4" FT /strain="Shintoku" FT /mol_type="genomic DNA" FT /cell_line="MA104" FT /db_xref="taxon:31588" FT 5'UTR 1..54 FT CDS 55..2142 FT /codon_start=1 FT /product="VP3" FT /db_xref="GOA:Q65526" FT /db_xref="InterPro:IPR009697" FT /db_xref="UniProtKB/Swiss-Prot:Q65526" FT /protein_id="AAB01673.1" FT /translation="MRVLGLFERGNNLNFADTYVYTWNKQYSFHENAFLISNQVATTII FT IYLDKEIVNQVNEAFNLLNSNGIPALIIKSDHIGIFTSSNFTYDWQNKIIYFHEYTYYK FT NNEFIVSDEFWLNTSIQDLLPYKVLFFERGLRKLYEGEEYILYNTATDDDIIYKYIYEK FT DVIMSGNDYSKLYDTKSFKNFVHFMRLLRMRFAVPFDQLSNRVTRSRAFAKSKIHIGLR FT NESIPQALDNIHHYWINYSANGMRVSELKGSGSYSEKKISEFDIGQFKNYMNFLTLMFY FT IKNMKKKPSCTIIGAAPGYWIPSMKKYFNIVTYDDKHVDSTEHYNRYFTDDDIASVKTN FT GVYIDVRSDFKNYDWKKRRQLVEEETMRWLSITYKLLENRYVEAVLLKMTAMDIEIPDG FT YFVHFPTTYRKSEYYLLVDKQTVKRPKIKITKSLAYGAINTIFSDNVFISGKYSLKGKT FT EGVLALYCLSNTINPKEKVVQYANSFSGTCMTVRLNNTYILNKIIDFKTNADYTFLPSD FT FQCSIKTVLTSYRGYAGVFGYAITKDLKSDGNNHIYIIPNARDDDNFDTFASHLGLSRY FT SHSKRFSESATTMSGYLFRDMVSGKENMEDTDTENLASGHVFNAIAHYRFDYTYDIVGW FT LKLHKMRKFRVKSNIYGEHTDDEIRNAIEAAYVYYLLDGDEVGKEYAKRIMEIWDVQTW FT G" FT 3'UTR 2143..2166 XX SQ Sequence 2166 BP; 800 A; 288 C; 404 G; 674 T; 0 other; ggcaaaaaaa gcccaacacg caatgcgttc attgcaatcc agttcactga tgcaatgagg 60 gtattggggc tttttgaacg cgggaataat ctgaacttcg cagacacata tgtttataca 120 tggaataaac aatactcgtt tcatgaaaat gcgtttttaa tttctaatca agttgccacc 180 actataatta tatatctaga taaagaaatt gtaaaccaag tgaatgaagc atttaatctt 240 ttgaattcaa atggaatacc tgcgttaata attaaatctg atcatattgg gatatttaca 300 tcctcgaatt tcacatatga ttggcaaaac aaaattatat attttcatga atatacatat 360 tataaaaata atgaatttat tgtaagtgat gagttctggt taaatactag catacaagat 420 ttattgccgt acaaagtatt attttttgaa cgtggattga gaaagttata tgaaggtgaa 480 gagtatatat tatataatac tgcaactgac gatgacatta tatataaata catttatgaa 540 aaggatgtga taatgtctgg taatgattac tctaaattat atgacactaa aagttttaaa 600 aatttcgtac attttatgag actacttaga atgcggtttg ctgtaccatt cgatcagttg 660 tcaaatagag tcacacgatc tcgagctttt gctaaaagta aaatacacat tggactgaga 720 aatgaatcaa ttccacaagc gttagataat atacatcatt attggataaa ttattcagca 780 aacggaatga gggtatcaga attgaaagga tcaggaagtt actctgaaaa aaagattagt 840 gaatttgaca taggacaatt taagaattat atgaatttcc ttacactaat gttttatatt 900 aagaatatga aaaagaaacc gtcatgtacg ataattggag ccgctccagg atactggata 960 ccttcaatga aaaaatattt taacatagtc acttatgacg ataaacatgt tgatagcact 1020 gagcattata atcgatattt cacagatgat gatatagcca gtgttaaaac aaatggagtt 1080 tatatagatg tgaggtcaga ctttaaaaat tatgattgga agaaaagaag acaactggtt 1140 gaggaagaaa cgatgcgttg gttgagtata acatataaac tactggaaaa tagatatgtg 1200 gaagccgttt tactgaaaat gacggccatg gatattgaga taccagatgg atattttgtg 1260 cactttccaa ctacgtacag gaaaagtgag tattatctgt tagttgataa acaaactgta 1320 aaaagaccga aaattaaaat cactaaatca ttggcttatg gtgcgataaa tacgatattt 1380 tctgataatg tgttcatttc tggaaaatac tcattaaaag gaaaaactga aggagtatta 1440 gcattatatt gtttgtcaaa tacaataaat ccgaaggaga aagtagtgca atacgcaaat 1500 tcattctctg gtacatgtat gacagtaaga ctaaacaaca catatatttt aaataaaatt 1560 attgatttta agacaaatgc tgattataca ttcttgccat cagatttcca atgctcaatc 1620 aaaactgtat tgacatcata cagaggctat gctggcgttt ttggctatgc gataaccaaa 1680 gatttgaagt cggatgggaa taatcacatc tacatcattc caaatgcaag agatgatgac 1740 aattttgata ctttcgcatc acatttagga ctatctagat attcgcattc taagagattt 1800 tcagagtctg caactactat gtcaggatat ttatttagag atatggttag tgggaaagag 1860 aatatggaag acactgatac agaaaatttg gcttctggac atgtttttaa cgcaatagca 1920 cattatagat ttgattatac ttatgatatc gtaggatggc ttaaactgca taaaatgagg 1980 aaatttagag ttaaatcaaa tatatatggt gaacatactg atgatgaaat acgaaatgct 2040 attgaggctg cttacgtata ctatttactg gatggtgatg aagttggtaa agagtatgca 2100 aaaaggataa tggagatctg ggatgttcag acgtggggct aaatacctct accgtatgat 2160 gtggct 2166 // |
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