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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U20778; SV 1; linear; mRNA; STD; PLN; 1756 BP.
XX
AC   U20778;
XX
DT   13-MAR-1995 (Rel. 43, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Hordeum vulgare catalase (Cat2) mRNA, complete cds.
XX
KW   .
XX
OS   Hordeum vulgare
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Pooideae; Triticeae; Hordeum.
XX
RN   [1]
RP   1-1756
RX   DOI; 10.1007/BF00014973
RX   PUBMED; 8555444.
RA   Skadsen R.W., Schulze-Lefert P., Herbst J.M.;
RT   "Molecular cloning, characterization and expression analysis of two
RT   catalase isozyme genes in barley";
RL   Plant Mol. Biol. 29(5):1005-1014(1995).
XX
RN   [2]
RP   1-1756
RA   Skadsen R.W.;
RT   ;
RL   Submitted (07-FEB-1995) to the EMBL/GenBank/DDBJ databases.
RL   Ronald W. Skadsen, USDA-Agricultural Research Service, Cereal Crops
RL   Research Unit, 501 N. Walnut St., Madison, WI 53705, USA
XX
DR   GrainGenes; U20778; U20778.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1756
FT                   /organism="Hordeum vulgare"
FT                   /cultivar="Morex"
FT                   /mol_type="mRNA"
FT                   /haplotype="2n"
FT                   /dev_stage="2-4 day-old etiolated seedlings"
FT                   /tissue_type="aleurone, scutellum, shoot, coleoptile"
FT                   /db_xref="taxon:4513"
FT   5'UTR           1..58
FT   CDS             59..1543
FT                   /codon_start=1
FT                   /gene="Cat2"
FT                   /product="catalase"
FT                   /db_xref="GOA:P55308"
FT                   /db_xref="InterPro:IPR002226"
FT                   /db_xref="InterPro:IPR010582"
FT                   /db_xref="InterPro:IPR011614"
FT                   /db_xref="InterPro:IPR018028"
FT                   /db_xref="InterPro:IPR020835"
FT                   /db_xref="UniProtKB/Swiss-Prot:P55308"
FT                   /protein_id="AAA96948.1"
FT                   /translation="MDPCKFRPSSSFDTKTTTTNAGQPVWNDNEALTVGPRGPILLEDY
FT                   HLLEKIAHFARERIPERVVHARGASAKGFFECTHDVTGLTCADFLRAPGARTPVIVRFS
FT                   TVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPK
FT                   SHVQEYWRVFDFLSHHPESLHTFFFLFDDVGIPTDYRHMDGFGVNTYTFVSRAGKSHYV
FT                   KFHWRPTCGVSCLMDDEATLVGGKNHSHATQDLYDSIDAGNFPEWKLFVQVIDPDEEDR
FT                   FDFDPLDDTKTWPEDLVPLQPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKM
FT                   LQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKNNHYDGAMNFMHRDEEVDYYPSRHAP
FT                   LRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAH
FT                   PKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM"
FT   3'UTR           1544..1748
XX
SQ   Sequence 1756 BP; 361 A; 616 C; 478 G; 301 T; 0 other;
     cgcgagcgac actccccacc cccagcttag ctacgctact tcactcactc gaggaaggat        60
     ggatccctgc aagttccggc cgtcgagcag cttcgacacc aagacgacga cgacgaacgc       120
     cgggcagccg gtgtggaacg acaacgaggc gctcacggtg gggccgcgcg gcccgatcct       180
     gctggaggac tatcacctgc tggagaagat cgcccacttc gcgcgggagc gcatcccgga       240
     gcgcgtcgtg cacgcgcggg gcgcctccgc caagggcttc ttcgagtgca cccacgacgt       300
     caccggcctc acctgcgccg acttcctccg cgcgcccggg gcgcgcacgc cggtcatcgt       360
     ccgcttctcc accgtgatcc acgagcgcgg ctcgccggag accatccgtg acccgcgcgg       420
     gttcgccgtc aagttttaca cgcgcgaggg caactgggac ctgctcggca acaacttccc       480
     cgtcttcttc atccgcgacg gcatcaagtt ccccgacgtc atccacgcct tcaagcccaa       540
     cccaaagtcc cacgtgcagg agtactggcg cgtcttcgac ttcctctccc accacccgga       600
     gagcctccac accttcttct tcctcttcga cgacgtcggc atccccaccg actaccgcca       660
     catggacggc ttcggcgtca acacctacac cttcgtctcc cgcgccggca agtcccacta       720
     cgtcaagttc cactggcgcc ccacctgcgg cgtcagctgc ctcatggacg acgaggcaac       780
     cctcgttggc ggcaagaacc acagccacgc cacgcaggac ctctacgact ccatcgacgc       840
     cggcaacttc cccgagtgga agctcttcgt gcaggtcatc gaccccgacg aagaggaccg       900
     cttcgacttc gacccgctcg acgacaccaa gacatggcca gaggacctcg tccccctcca       960
     gcccgtgggc cgcctcgtgc tcgaccgcaa cgtcgacaac ttcttcaacg agaacgagca      1020
     gctcgcgttc ggccccggcc tcgtcgtgcc cgggatctac tactccgacg acaagatgct      1080
     gcagtgcagg gtgttcgcat acgccgacac gcagcgctac cgcctggggc caaactacct      1140
     gatgctcccc gtcaacgcgc ccaagtgcgg cttcaagaac aaccactacg acggcgccat      1200
     gaacttcatg caccgcgatg aggaggtgga ctactacccg tctcgccacg cgccgctccg      1260
     gcatgccgag ccggccagct tccccgtgcc gacgaggccc gtggttggaa agagggagaa      1320
     gacgaggatc aagaaggaga acgacttcgt gcagcccggg gagaggtacc gcagctgggc      1380
     gcccgaccgc caggacaggt tcgtgcgccg cttctccgac gcgctcgcgc accccaaggt      1440
     cagccacgag ctgcgtgtca tctggatcga cttcctctcc aagtgtgaca agtcgtgcgg      1500
     gatgaaggtg gcgaaccgcc tcaacgtgaa gccaagcatg tgatggatgg atctgccatg      1560
     gatgatggat ggaccattct gtgtaaactt tgtgctatat catgaaccag ccagcaataa      1620
     gggaccatgc atgccagcta ctgtggatca tgtggtcgaa tagataccat gctactaata      1680
     agttaccatc ttttgttaca gtaaactgca tgtactctag cttaaactaa agtgggtgct      1740
     tcgagcttaa aaaaaa                                                      1756
//
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