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EBI DbfetchID U20229; SV 1; linear; genomic DNA; STD; PRO; 4926 BP. XX AC U20229; XX DT 20-FEB-1995 (Rel. 42, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Haemophilus influenzae BOLA (bolA), glutathione reductase (gor), DE phosphatidylserine decarboxylase (psd), 30K protein (rpmF), genes, complete DE cds. XX KW . XX OS Haemophilus influenzae OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. XX RN [1] RP 1-4926 RA Barcak G.J., Heimer S.R.; RT ; RL Unpublished. XX RN [2] RP 1-4926 RA Barcak G.J.; RT ; RL Submitted (24-JAN-1995) to the EMBL/GenBank/DDBJ databases. RL Gerard J. Barcak, Biochemistry, University of Maryland at Baltimore, 108 RL North Greene Street, Baltimore, MD 21201, USA XX FH Key Location/Qualifiers FH FT source 1..4926 FT /organism="Haemophilus influenzae" FT /strain="Rd" FT /isolate="KW20" FT /mol_type="genomic DNA" FT /db_xref="taxon:727" FT CDS complement(27..224) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf65" FT /db_xref="GOA:P43955" FT /db_xref="InterPro:IPR008703" FT /db_xref="UniProtKB/Swiss-Prot:P43955" FT /protein_id="AAA62134.1" FT /translation="MITIKKGLDLPIAGKPAQVIHSGNAVNQVAILGEEYVGMRPSMKV FT REGDVVKKGQVLFEDKKILV" FT CDS complement(519..830) FT /codon_start=1 FT /transl_table=11 FT /gene="bolA" FT /product="BOLA" FT /function="stationary phase regulatory protein" FT /db_xref="GOA:P43780" FT /db_xref="InterPro:IPR002634" FT /db_xref="UniProtKB/Swiss-Prot:P43780" FT /protein_id="AAA62135.1" FT /translation="MSIQQIIEQKIQKEFQPHFLAIENESHLHHSNRGSESHFKCVIVS FT ADFKNIRKVQRHQRIYQLLNEELNHSIHALALHLFTPEEWKAQNETVPHSTKCAGIGR" FT misc_feature 775..785 FT /gene="bolA" FT /note="encodes DNA uptake recognition sequence" FT RBS complement(838..842) FT /gene="bolA" FT protein_bind 877..913 FT /bound_moiety="OxyR" FT /note="OxyR recongition sequence (Tartaglia, L.A., et al., FT J. Mol Biol. 210: 709-710, 1989)" FT RBS 915..919 FT /note="orf199" FT CDS 924..1523 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf199" FT /db_xref="GOA:P43782" FT /db_xref="InterPro:IPR005619" FT /db_xref="UniProtKB/Swiss-Prot:P43782" FT /protein_id="AAA62136.1" FT /translation="MALVNKIKTLSSVGILAATLFLAGCQAQSNILAFTPPAPSASMNV FT NRTAVVSVTTKDSRAIQEIASYTKHGELIKLNASPSVTQLFQQVMQQNLISKGFRVGQL FT NGSNAWVTVDVREFGTQVEQGNLRYKLNTKIQATVYVQGAKGSYNKSFNVTHSQEGVFN FT AGNDEIHKVLSQTFNDIVNNIYQDQEVAAAINQYSN" FT -35_signal 1343..1348 FT /gene="gor" FT /note="putative" FT -10_signal 1365..1370 FT /gene="gor" FT /note="putative" FT -35_signal 1585..1590 FT /gene="gor" FT /note="putative" FT -10_signal 1605..1610 FT /gene="gor" FT /note="putative" FT RBS 1728..1731 FT /gene="gor" FT CDS 1739..3109 FT /codon_start=1 FT /transl_table=11 FT /gene="gor" FT /product="glutathione reductase" FT /function="reduces oxidized glutathione using NADPH" FT /EC_number="1.6.4.2" FT /db_xref="GOA:P43783" FT /db_xref="InterPro:IPR000815" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR004099" FT /db_xref="InterPro:IPR006322" FT /db_xref="InterPro:IPR012999" FT /db_xref="InterPro:IPR013027" FT /db_xref="InterPro:IPR016156" FT /db_xref="UniProtKB/Swiss-Prot:P43783" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA62137.1" FT /translation="MTKHYDYIAIGGGSGGIASLNRAASYGKKCAIIEAKHLGGTCVNV FT GCVPKKVMFYGAHIAEAINNYAPDYGFDVEVKKFDFSKLIESRQAYISRIHTSYNNVLA FT KNNIDVINGFGKFVDAHTIEVTLADGTKEQVTADHILIATGGRPYRPNIKGQEYGIDSD FT GFFALTELPKRAAVIGAGYIAVELSGVLNSLGVETHLLVRRHAPMRNQDPLIVETLVEV FT LAQDGIQLHTNSTPSEIVKNADGSLTVRCDGQSDVTVDCVIWAAGRVPTTDKIGLENAG FT VETNEHGYVKVDKYQNTNVKGIYAVGDIIENGIELTPVAVAAGRRLSERLFNNKPTEYL FT DYSLVPTVVFSHPPIGTVGLTEPQAIEQYGAENVKVYKSSFTAMYTAVTQHRQPCKMKL FT VCVGKDEKVVGLHGIGFGVDEMIQGFAVAIKMGATKADFDNTVAIHPTGSEEFVTMR" FT CDS complement(3218..4090) FT /codon_start=1 FT /transl_table=11 FT /gene="psd" FT /product="phosphatidylserine decarboxylase" FT /function="lipid metabolism" FT /db_xref="GOA:P43789" FT /db_xref="InterPro:IPR003817" FT /db_xref="InterPro:IPR005221" FT /db_xref="UniProtKB/Swiss-Prot:P43789" FT /protein_id="AAA62138.1" FT /translation="MMTSNSYWQRLKVAFQYVMPQIYLTQIAGWFAKQKWGKITHFVIK FT AFAKKYNIDMSIAQKEQFSDYASFNEFFIRPLKENARPINQNPTALCLPADGRISECGH FT IDDNLLLQAKGHFFSLEDLLAEDKELVETFKNGEFVTTYLSPRDYHRVHMPCDATLRKM FT IYVPGDLFSVNPFLAQHVPNLFARNERVICVFDTEFGTMVQILVGATITASIGTTWAGV FT INPPRHNEVKTWTYEGESAVKLLKGQEMGWFQLGSTVINLFQANQVRLADHLSVNEPVR FT MGEILAYKK" FT misc_feature complement(3364..3374) FT /gene="psd" FT /note="encodes DNA uptake recognition sequence" FT misc_feature complement(3780..3790) FT /gene="psd" FT /note="encodes DNA uptake recognition sequence" FT misc_feature 3818..3825 FT /gene="psd" FT /note="encodes DNA uptake recognition sequence" FT RBS complement(4097..4100) FT /note="psd" FT protein_bind complement(4126..4152) FT /bound_moiety="OxyR" FT /note="OxyR recognition sequence (Toledano, M.B. et al., FT Cell 78:897-909.)" FT CDS 4247..4771 FT /codon_start=1 FT /transl_table=11 FT /gene="rpmF" FT /product="30K protein" FT /db_xref="InterPro:IPR003772" FT /db_xref="UniProtKB/Swiss-Prot:P43790" FT /protein_id="AAA62139.1" FT /translation="MQKVKLPLTVDPIKDAQRRLDYVGYYAANQLERLAESVVNVLSDA FT QVTLSFYVDPQKLVVMKGKVQIDVDLECQRCNEPYKQTLECEFTYSPVANWDQADDLPE FT IYEPIEFNEFGEIDLIGTVEDELILALPLVPMHSSEHCEVSAQEQVFGVLPEELAKKPN FT PFAVLANLKQK" FT CDS complement(4561..>4926) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf121" FT /db_xref="UniProtKB/TrEMBL:Q48047" FT /protein_id="AAA62140.1" FT /translation="LQLRGGVSEFHRLLYLLIQQQLLKHRVNDAYHDVNEIFCFVEQPL FT AILLNLIYFCFKLANTANGFGFFANSSGNTPKTCSCADTSQCSDECIGTSGKAKISSSS FT TVPIKSISPNSLNSIGS" XX SQ Sequence 4926 BP; 1598 A; 862 C; 938 G; 1528 T; 0 other; ggtaccgctt gcaggggctg taaaaattac accaggattt ttttgtcttc aaaaagtact 60 tgaccttttt tcacaacatc gccttcgcgc accttcattg aaggacgcat ccccacatac 120 tcctcaccta gaatcgcaac ttgattcaca gcgttgccgc tatggattac ttgtgctggt 180 tttcccgcaa ttgggagatc caaacctttc ttaattgtaa tcatactatt tgcactactt 240 ttcaaggtta aaaatacaat tgctaatata gtaaaaatac cctagaagca atctcacgtt 300 tgagtgtgac aaaccgctaa aaaaacatta atgtcacaaa ataaaaaact caaatggatt 360 gatttcacag cttaataatt tttacccgag caaatcgaat ttggactaaa ttaaacgcct 420 cattctagcg aaaatctctg tttttcgcta cttaaacaga gggtttttgg ttagaacttt 480 tggcgatata tcaaaaatgt tacattttta taacaaaatt aacgaccaat acctgcacat 540 ttggttgagt gcggtacagt ttcattttgt gctttccatt cttctggagt gaataaatgt 600 aatgctaatg cgtgaatact atgatttaat tcttcgttca ataattgata aatacgctga 660 tgacgttgta cttttcgaat atttttaaag tctgcgctga caataacgca tttaaaatgt 720 gattcagaac ctcgattaga gtgatgtaaa tggctttcat tttctattgc taaaaagtgc 780 ggttgaaatt ctttttgaat tttttgctca ataatttgtt gaattgacat tataagttct 840 ccacaaaaac taaaatgaca cgctatacat taataaggaa gtttgtaaga atagcacaat 900 tctaattgat ttatggggaa attatggcat tagtaaacaa aattaaaaca ttatcatcag 960 taggtattct agcggctaca ttatttcttg caggctgcca agcacaatca aatatattag 1020 catttacgcc gcctgcacca agtgcttcaa tgaatgttaa tcgaactgcc gttgtatctg 1080 tgacaacaaa agatagccgt gcaatacaag agattgcgag ttatacgaaa cacggggaac 1140 tgattaaatt aaatgcatcc ccaagtgtta cacaattatt tcagcaagtg atgcagcaaa 1200 atttaattag taaaggtttt agagttgggc aattaaatgg ttcaaatgcg tgggtaactg 1260 tggatgtgcg tgaatttggt acgcaagtag aacaaggtaa tcttcgttat aaacttaata 1320 ccaaaattca agcgacagtt tatgtacaag gtgcgaaagg ttcgtataat aaatcattta 1380 atgtcacgca ctcacaagag ggcgtattta atgcgggcaa tgatgaaatt cataaagtgc 1440 tatctcaaac ttttaatgat attgtgaaca atatttatca agatcaagaa gttgcggctg 1500 cgataaacca atattctaat taatcacata tctacagtga ggaagattga acaatcttcc 1560 tctttttcta tcacgctatt tcattctaca tactaggctt cacataaaat catttcaaac 1620 taatcatctg ttcaaaagag taaaaaatat tcataaaacc aattacatca atttatagca 1680 ttctttataa aaattaggca gaatacaaaa aaattttagt ttaaaaaagg atcaaactat 1740 gactaaacat tatgattata ttgctattgg cggtggcagt ggcggtattg cgtctctaaa 1800 tcgagcagca agctatggaa aaaaatgtgc aatcattgaa gcaaaacatc ttggcggaac 1860 ttgtgtaaat gtcggttgtg tacctaaaaa agtgatgttt tatggtgcgc atattgcaga 1920 agcaatcaac aattatgcgc cagattatgg ttttgatgtt gaagtgaaaa aatttgattt 1980 ttcaaaactg attgaaagtc gccaagccta tattagtcgt atccatacat cttataataa 2040 tgtattagcg aaaaataata ttgatgtaat taatggtttc ggaaaatttg tcgatgccca 2100 taccattgaa gtaacacttg ctgatggtac aaaagaacaa gtaaccgcag atcatatttt 2160 aatcgcaact ggtggtcgtc catatcgtcc aaatattaaa ggacaagaat acggcattga 2220 ttcagatggt ttctttgcat taaccgaatt accaaaacgt gctgctgtta ttggtgcagg 2280 ctatattgct gttgaacttt ctggcgtatt aaatagctta ggcgtggaaa cacatttatt 2340 agtgcgtcgc catgcgccaa tgcgtaatca ggatccatta atcgtagaaa cattagtgga 2400 agtgcttgcg caagatggaa ttcaattaca taccaattct accccatctg aaattgtaaa 2460 aaatgcagat ggttcactta ctgtaagatg tgatggtcaa tctgatgtta ccgtagattg 2520 cgttatttgg gctgcgggtc gtgttccaac gacagataaa attggcttag aaaatgctgg 2580 cgtagaaacg aacgaacatg gctatgtcaa agtagataaa tatcaaaata ctaatgtgaa 2640 aggcatttat gcggtaggcg atattatcga aaacggcatt gaattaacac cagttgcagt 2700 tgcagcaggt cgtcgccttt ctgagcgttt atttaataat aaaccgactg aatatttaga 2760 ttacagttta gttccaaccg ttgtatttag ccatccgcct atcggcactg taggtttaac 2820 tgaaccgcaa gcgattgagc agtacggcgc agaaaatgtt aaggtatata aatcttcttt 2880 cacagcgatg tacactgcgg taactcaaca tcgccaaccg tgcaaaatga aattagtttg 2940 tgtgggtaaa gatgaaaaag ttgtgggttt acatggtatt ggttttggtg tagatgaaat 3000 gattcaagga tttgctgtag caatcaaaat gggtgcaaca aaagctgatt ttgacaatac 3060 ggtggcaatt catccaacag gttcagagga atttgtaaca atgcgttaat tgttcaaatg 3120 aaagaagaaa aaggcagtaa ggttatactg cctttaaaga agtgagaaat atctactttc 3180 aggatttgtt tctgtcattt atggaaataa atcctgttta ttttttatat gccaagattt 3240 cgcccatgcg aacaggttca ttaacgctta aatgatcagc taaacgcact tgatttgctt 3300 ggaataaatt aattactgtc gaaccaagtt ggaaccaccc catttcttga cctttcaata 3360 atttgaccgc actttcgcct tcataagtcc aagttttcac ttcgttgtgg cgtggaggat 3420 taattacgcc tgcccaagtt gtgccaatac ttgcagtgat ggttgcaccc actaaaattt 3480 gtaccattgt gccaaattca gtatcaaata cacaaatcac acgttcatta cgtgcaaata 3540 aatttggtac atgttgggct aaaaatgggt tcacagagaa taaatcaccc ggcacataaa 3600 tcattttgcg tagcgtagca tcgcatggca tatgcactcg gtgataatca cgaggagaaa 3660 gataagtagt tacaaattcc ccatttttaa aggtttccac taattcttta tcttctgcca 3720 ataagtcttc taggctgaaa aaatgcccct tagcttgcaa taaaagatta tcgtcaatat 3780 gaccgcactc actaatgcga ccgtctgctg gtaaacaaag tgcggttgga ttttgattaa 3840 ttggacgtgc gttttctttt aacggacgaa taaaaaattc attaaaactt gcgtaatcag 3900 aaaattgttc tttttgcgca atgctcatat caatgttgta ttttttcgca aaagctttaa 3960 ttacaaaatg tgttattttg ccccattttt gtttagcaaa ccagccagca atttgagtta 4020 aataaatttg tggcatgaca tattgaaatg ccacttttaa gcgttgccaa taagaatttg 4080 aagtcatcat tatctttcct tgttaaaaaa agaggcgtga ttatagcaat ttttgttata 4140 gttccaacct ttttagttag cggataattt cctttattga gttatccaat aaaaaatgtg 4200 atttcccttt gactatcttc gcaacaacag gtaatattca cgccctatgc aaaaggtaaa 4260 actacccctc actgttgatc ccataaaaga tgctcaaaga cggcttgatt atgttggtta 4320 ttatgcggca aatcagcttg agcgtttggc ggaatcagtg gtaaacgtgc tcagcgatgc 4380 acaggtaaca ttatcgtttt atgttgatcc acaaaaatta gtggtgatga aaggtaaagt 4440 acagattgat gtcgatcttg aatgtcagcg ttgtaacgaa ccttacaaac aaacattgga 4500 atgtgagttt acttatagtc cagtggctaa ttgggatcag gctgatgact tgcccgaaat 4560 ttatgagcca atcgagttca atgagtttgg cgaaatagat ttaattggca cggtggaaga 4620 tgagctaatt ttagctttgc cgcttgtacc aatgcattca tctgaacact gtgaagtgtc 4680 cgcgcaggaa caggtttttg gcgtattgcc tgaagaattg gcaaaaaaac cgaacccgtt 4740 cgctgtatta gctaatttaa agcaaaagta aattaaattt aggagtatag ccaatggctg 4800 ttcaacaaaa caaaaaatct cgttcacgtc gtgatatgcg tcgttcacac gatgctttaa 4860 caactgctgc tgtatcagta gataaagcaa gcggtgaaac tcacttacgc caccacgtaa 4920 ctgcag 4926 // |
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