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EBI DbfetchID U19362; SV 1; linear; genomic DNA; STD; PRO; 5359 BP. XX AC U19362; XX DT 13-APR-1995 (Rel. 43, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 7) XX DE Methanobacterium thermoautotrophicum methylene-tetrahydromethanopterin DE dehydrogenase (mtd), imidazoleglycerol-phosphate dehydrogenase (hisB), and DE putative ferredoxin (fdxA) genes, complete cds, orf9 gene, partial cds, DE orfs 10, 11, 12, 13, and 14 genes, complete cds. XX KW . XX OS Methanothermobacter thermautotrophicus OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; OC Methanobacteriaceae; Methanothermobacter. XX RN [1] RP 1-5359 RX PUBMED; 7730278. RA Nolling J., Pihl T.D., Vriesema A., Reeve J.N.; RT "Organization and growth phase-dependent transcription of methane genes in RT two regions of the Methanobacterium thermoautotrophicum genome"; RL J. Bacteriol. 177(9):2460-2468(1995). XX RN [2] RP 1-5359 RA Noelling J.; RT ; RL Submitted (03-JAN-1995) to the EMBL/GenBank/DDBJ databases. RL Joerk Noelling, Microbiology, The Ohio State University, 484 West 12th RL Avenue, Columbus, OH 43210, USA XX FH Key Location/Qualifiers FH FT source 1..5359 FT /organism="Methanothermobacter thermautotrophicus" FT /strain="delta H" FT /mol_type="genomic DNA" FT /db_xref="taxon:145262" FT CDS <1..339 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf9" FT /db_xref="UniProtKB/TrEMBL:Q50498" FT /protein_id="AAA87409.1" FT /translation="DIYNPIEMIAFADIVTAPSGRYRDYLEDQYLLENVEVIGGYPHAL FT YVSRLQIVDPGIRDYTLLVLGGDLRRRDIPEVISGVEALDRRVLVVPFRFSPGLCQELC FT KIWQRGGT" FT CDS complement(295..831) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf10" FT /db_xref="UniProtKB/TrEMBL:Q50499" FT /protein_id="AAA87410.1" FT /translation="MLLINVGDLWNMEEPQGSPEKQSAENMRRGLPERRGAQTARTTYL FT KCLRASQIRFMDLKPPLGPANSLKSSTSSESLLKAASAFLTMSDAAGGLTSSTTSLRSP FT ASATGIPTSPARSTLACLPRKPLILMEGTPSTAASIVMPIPAPYTMRSAALMREGRSTK FT PSSTSTLPDFTKLLT" FT CDS 863..1291 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf11; similar to the N-terminal part of the E. coli FT cvaB product, Swiss-Prot Accession Number P22520" FT /db_xref="GOA:Q50500" FT /db_xref="InterPro:IPR005074" FT /db_xref="UniProtKB/Swiss-Prot:Q50500" FT /protein_id="AAA87411.1" FT /translation="MEVFVMSTSLGDEVIVMQSRSYSCGPAALATVLRNLGVNCTEAEL FT AELAGTDESGTTMYGLIVAATSKGLRARGVKMELNDLRKNHIVFVKYGDTCHYTVIMSM FT DERNVTLADPALGRITVKREIFSRIFTGNVLVVERPCD" FT CDS 1457..2287 FT /codon_start=1 FT /transl_table=11 FT /gene="mtd" FT /product="H2F420-dependent FT methylene-tetrahydromethanopterin dehydrogenase" FT /db_xref="GOA:Q50501" FT /db_xref="InterPro:IPR002844" FT /db_xref="UniProtKB/Swiss-Prot:Q50501" FT /protein_id="AAA87412.1" FT /translation="MVVKIGIIRCGNIGTSPVLDLLLDERADRPNIDVCVVGSGAKMNP FT DEIERAVPTMLEMDRDFVIFISPNPGAPGPAKARELLSEADVPAMIIGDAPGLRVKDEI FT EEQGLGYIIVKADPMIGARREFLDPTEMASFNSDVIKVLAFTGAYRVVQNTIDAMIADV FT EAGKAPELPQVVIDTDVAVEAAGYENPYAKAKAMAAYEIATKVADIDVKGCFMVQDPDK FT YIPIVASAHEMLAAAAKLAVEAREIEKANDTVLRTPHGKEGETLSKTDLLAKPE" FT CDS complement(2414..2785) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf12" FT /db_xref="UniProtKB/TrEMBL:Q50502" FT /protein_id="AAA87413.1" FT /translation="MNQISEKGVTFKDESEYRWLWDLLRDINQRGTFNCLLSDGRHLFC FT YHDHAGYNGLCQLHRRAPYDKVKLLDDDYEINLAHEKRPDQEGYIIASNPLTNEKWEEF FT QEGELRVYRDGKLVYISGE" FT CDS complement(2863..3249) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf13" FT /db_xref="InterPro:IPR017932" FT /db_xref="UniProtKB/TrEMBL:Q50503" FT /protein_id="AAA87414.1" FT /translation="MIISLKDCKSRLSTGMGVNVLCELLGMCFNQEVQPSFSLRGFRMR FT SERNPHGWGLAFYPDKSVQVYKEPVKSRKSIMAEIMEGYNLIRSSIIMSHVRTKSSGEI FT SHKDTHPSRGSGTVENMYSPTMAP" FT CDS complement(3551..4135) FT /codon_start=1 FT /transl_table=11 FT /gene="hisB" FT /product="imidazoleglycerol-phosphate dehydrogenase" FT /db_xref="GOA:Q50504" FT /db_xref="InterPro:IPR000807" FT /db_xref="UniProtKB/Swiss-Prot:Q50504" FT /protein_id="AAA87415.1" FT /translation="MITMRRSMKTRETLETHVKVDLEIDGSGKSSVNTGLGFLDHMLES FT VARHGLLDLEVEARGDLEVDDHHTVEDVALTLGEALREALGDKSGIRRMAHAMVPMDDA FT LATVALDLSGRPYTVLELEFDDAVIGDVKSQNIGHFIESLAVSAAMNIHASVRGRNDHH FT KAEALFKALALAIRDAVRVEHGEIPSTKGKL" FT CDS complement(4092..4343) FT /codon_start=1 FT /transl_table=11 FT /gene="fdxA" FT /product="putative ferredoxin" FT /db_xref="GOA:Q50505" FT /db_xref="HSSP:1DUR" FT /db_xref="InterPro:IPR017900" FT /db_xref="UniProtKB/TrEMBL:Q50505" FT /protein_id="AAA87416.1" FT /translation="MKMGVVHLKIIVDPDKCTACGECREACPKGGKIWTIQRGKPATPS FT NLEFCHQCMICASKCPEGAIRIIRDDNYEKKYEDEGNP" FT CDS 4431..5237 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="orf14" FT /db_xref="UniProtKB/TrEMBL:Q50506" FT /protein_id="AAA87417.1" FT /translation="MPSLSWRFLCEAGVIWVSISSPSPASTLTLTMSPFISRPVTLPLM FT MFLMLVTCLSLIRTTSSGSTRRMTLSPADTSYARAASMVKPPTTTLRPSAETSLTTPSS FT SFTVLCLSRALFSLRYSLMIIKACICEPAASTTSPSTTPGLHYVLAKDILDVPYVCKGA FT SVGNSSIPCCNCYGAHPVDEVEELEHSLINRNFKIVDRDSTGKSHCRTYGAGSLYLYAI FT NYLAHRSIRSAILATAPLRGPILAPNLRMSLTSLFSTPPTRRMLRP" XX SQ Sequence 5359 BP; 1356 A; 1319 C; 1274 G; 1410 T; 0 other; gatatctaca accccatcga gatgatagcc ttcgcagaca ttgtaacggc accttcagga 60 cgctacaggg attaccttga ggaccagtac ctccttgaga atgttgaggt catcggagga 120 tacccccacg ccctctatgt gagccgcctc cagatcgtag acccggggat aagggactac 180 accctccttg tacttggagg ggacctgagg agaagggaca taccggaggt gatctcaggg 240 gttgaagcac ttgacaggag agtcctggtt gtcccgttcc gtttcagccc gggattatgt 300 caggagcttt gtaaaatctg gcaacgtgga ggtacttgag ggcttcgttg accttccctc 360 cctcatgagc gccgctgacc tcatggtata cggtgccgga atgggcatca caatcgaggc 420 ggcggtactg ggtgtcccct ccatcaagat taagggcttc ctcgggaggc atgccagtgt 480 tgacctcgcc ggtgaggtgg ggataccggt tgctgatgct ggtgatctga gggatgtggt 540 ggatgatgtc agaccaccag cagcatcaga cattgtcaga aacgctgaag ctgctttaag 600 caagctttca gaacttgtag aagattttaa tgaatttgcc ggtcccagag gtggttttaa 660 gtccatgaaa cgaatctggg atgcccgcaa acatttcagg taggttgttc tggctgtctg 720 cgcacctctt ctttctggta gtcctcttct catattctca gctgattgtt tctctggaga 780 tccctgaggt tcttccatat tccacagatc accaacattt attaataaca tttaataatt 840 aattattaac atcagtatta aaatggaggt ttttgttatg agcacatctc tgggtgatga 900 ggttatagtc atgcagagca ggagctacag ctgtggaccg gcagcgcttg caacggtcct 960 cagaaacctt ggagtgaact gtaccgaggc agaacttgca gaacttgcag gtacagacga 1020 atcaggtacc acaatgtatg gactgatcgt tgcagcaact tcaaagggcc tgagagcaag 1080 gggagttaaa atggaactca atgatcttag aaaaaaccac atagtctttg ttaagtatgg 1140 agacacatgt cactacacag tcatcatgtc catggatgag agaaatgtca cacttgcaga 1200 ccctgcactt gggaggatca cagttaagag ggagatattt tcaaggatct tcacgggcaa 1260 tgtccttgtt gttgaaagac cctgtgatta ataaattcaa tattaaatta aatgattaaa 1320 atattattta taatttgaat tttaaccatc cgcatcccag caaccgtgaa aaatatactg 1380 atataaaagc ttaatcataa tctttaaatc ataaaatact taataaggtg caaaataata 1440 agattctggt gatctaatgg ttgtaaaaat tgggataata agatgcggta acatcgggac 1500 ctcaccggta cttgacctgt tactagatga gagggccgac aggccaaaca tagatgtatg 1560 tgtggttggt tctggtgcaa agatgaaccc tgatgaaatt gagagggcag tacccaccat 1620 gcttgaaatg gacagggact ttgttatatt tataagtcca aaccccggtg caccgggccc 1680 tgcaaaggca agggaactcc tatcagaggc tgacgtccct gccatgataa ttggtgacgc 1740 tccaggtctg agggtaaagg atgaaataga ggaacaggga ctcggttaca tcatagttaa 1800 ggcggaccca atgataggtg ccaggaggga gttcctggac ccaacagaga tggcatcctt 1860 caactccgac gttataaagg ttctggcgtt cacaggtgca tacagggtcg ttcagaacac 1920 aattgatgcc atgattgccg atgttgaggc tggaaaggct cctgaacttc cacaggttgt 1980 tatagatacc gacgtggctg ttgaggcagc aggatatgag aacccatatg caaaggccaa 2040 ggccatggca gcatatgaga tagccaccaa ggttgcagat atagacgtta agggctgctt 2100 catggtgcag gatccagaca agtacatacc aatagttgca tcagcacatg aaatgctggc 2160 cgcagcagcc aaacttgcag tagaagcaag ggagattgaa aaggccaacg acaccgtcct 2220 caggacacca cacggtaaag agggcgaaac attaagcaaa actgatcttc tggccaaacc 2280 agaatagatc agttctggtt ttactttttt tctcccttta atataatttt agaggtctca 2340 gctgaaaaga catccacaca agttttgaag ttccacagca aaatgaagtg gggatggaga 2400 ggttcagatt aacctattct ccggagatgt ataccagttt accatccctg tagaccctca 2460 gttcaccctc ctggaattct tcccattttt cattggtcag aggattgctt gcgatgatgt 2520 agccctcctg gtcgggtctt ttctcatggg caaggtttat ctcgtagtca tcgtccagga 2580 gtttcacttt atcatagggt gcccttcggt gcagctggca gagaccattg tatccggcat 2640 ggtcatggta acagaagaga tgcctgccat cggatagaag gcagttgaat gttccgcgct 2700 ggtttatatc ccgcaggagg tcccatagcc acctgtattc tgattcatcc ttgaatgtaa 2760 cccccttttc gctgatctgg ttcatgatat ggcaaaaggc tatctcagag tcagtttcac 2820 ctactggccg gtatcttccg tcttccaggt taaattctgc atttagggtg ccattgtggg 2880 cgaatacata ttctctaccg tcccactccc tctggaagga tgggtatcct tgtgggagat 2940 ctctccactg cttttagtcc ggacatggga cattatgatg ctggatctga taaggttata 3000 gccctccatg atctccgcca taatgctttt tctggatttt actggctcct tatacacctg 3060 gacggatttg tccggataga aggcaagccc ccatccgtgg gggttgcgct ctgatctcat 3120 cctgaaaccc ctcaaggaga aggatggctg cacctcctgg ttgaaacaca ttcctaaaag 3180 ttcacacaaa acgttcaccc ccattccagt tgataaccgc gatttgcagt ccttcaatga 3240 tatgatcatg gccggtgagc ctgatcctga tacaatatat gttaaaaaag gttaataaat 3300 gtttacaaat taagatttga tattatcagt gaatggatat acttgaagcg tgtctgatgt 3360 tttctgggtc cccatggtgg tctctggatg aacatggctg aggcacaatc caccatggag 3420 gtgactcatg ttaatcaatg aaaaaaaggg gcttacggtt gcgtggagag gtgctttact 3480 gtttcagtgg agccggaatg ccggctaaat tatctggaac tggagttttc atcccatatc 3540 ctgttccata ttacaatttg cccttcgtgc ttggaatttc cccgtgttca acccggacag 3600 cgtcccggat tgcaagggca agggccttaa atagagcctc ggccttgtga tggtcgttcc 3660 ttcccctcac ggaggcgtgg atgttcatgg ctgcagatac cgcaagggac tcaatgaagt 3720 gtcctatgtt ctgtgatttc acatcaccta tcacagcatc atcgaattcc agttcaagga 3780 ccgtataggg ccttccactg aggtccaggg caacggttgc aagggcatca tccattggga 3840 ccatggcatg ggccatcctc cttataccgc tcttatcacc cagggcctcc ctcagggcct 3900 cccccagtgt gagggcaaca tcctcaacgg tatgatggtc gtcaacctcc aggtcacccc 3960 tcgcctcaac ctccaggtca aggagtccat ggcgtgcaac tgattcaagc atgtggtcaa 4020 ggaatccgag accggtgttc acgcttgatt ttccactccc gtcgatttca agatccacct 4080 tcacatgggt ttcaagggtt tccctcgtct tcatacttct tctcatagtt atcatccctg 4140 ataattctta tggcgccctc aggacactta cttgcgcaga tcatgcactg gtggcagaat 4200 tcaagatttg atggggttgc aggcttccct ctctggatgg tccatatctt accacccttg 4260 gggcatgcct cccggcactc gccacatgct gtgcacttat ctggatcaac aattatcttc 4320 aagtgaacca ctcccatctt catgaaaggt taatgcgttt tgagattatg tgaacacctc 4380 atatcttcag gacggtaaca gcaactgcct taaaaccggc gtagatcatt gtgcccagtt 4440 taagctggag gttcctctgt gaagccggtg ttatatgggt ttcaatttca agtccatcac 4500 cggcgtccac tctgaccctt acgatgtccc ccttcatctc aagacctgtc accctccccc 4560 tgatgatgtt cctcatgctt gtgacctgcc tttccctcat caggacaaca tcgtcgggtt 4620 caacaaggag gatgaccctg tccccggcgg atacatccta tgcacgggcg gcatcaatgg 4680 tgaaaccccc taccacaacc ctgagaccat ccgctgaaac ctccttaacg acaccctcaa 4740 gttcattcac agttctctgt ctttcgaggg ccctctttag tttaaggtac tccttgatga 4800 tcatcaaggc ctgtatctgt gagcctgctg cctccaccac ctccccttcc accacgccgg 4860 gtctccacta tgttctcgcc aaggatatcc tcgacgttcc gtatgtatgc aagggcgctt 4920 ctgtagggaa ttccagcatc ccttgctgca actgttatgg agcccatcct gtggatgagg 4980 ttgaggagct tgaacattct ctcatcaacc ggaacttcaa gatcgttgat agggattcta 5040 caggcaaatc tcattgtaga acctatggcg ccggttcttt atatctttat gccatcaact 5100 atctcgccca ccggtccatc agatcagcca ttcttgcaac tgcaccactg aggggcccca 5160 tccttgcacc taaccttcga atgagcctca catccctctt ctcaacacca ccgacaagga 5220 gaatgctcag accataaacc aggggagcga agatgatggc tgcaaggagg cctgggatgt 5280 tctgggggag cagaatcatg aaaccaccca taaccccgga tgcagtggct atcctgatga 5340 acgccatccc tggaagctt 5359 // |
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