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EBI DbfetchID U17709; SV 1; linear; genomic DNA; STD; PLN; 3658 BP. XX AC U17709; XX DT 14-DEC-1994 (Rel. 42, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Gracilaria verrucosa aconitase gene, nuclear gene encoding mitochondrial DE protein, complete cds. XX KW . XX OS Gracilaria gracilis OC Eukaryota; Rhodophyta; Florideophyceae; Gracilariales; Gracilariaceae; OC Gracilaria. XX RN [1] RP 1-3658 RX DOI; 10.1007/BF00021189 RX PUBMED; 7647296. RA Zhou Y.H., Ragan M.A.; RT "Characterization of the nuclear gene encoding mitochondrial aconitase in RT the marine red alga Gracilaria verrucosa"; RL Plant Mol. Biol. 28(4):635-646(1995). XX RN [2] RP 1-3658 RA Ragan M.A.; RT ; RL Submitted (29-NOV-1994) to the EMBL/GenBank/DDBJ databases. RL Mark A. Ragan, NRC Institute for Marine Biosciences, 1411 Oxford St., RL Halifax, Nova Scotia, B3H 3Z1, Canada XX FH Key Location/Qualifiers FH FT source 1..3658 FT /organism="Gracilaria gracilis" FT /mol_type="genomic DNA" FT /db_xref="taxon:2777" FT misc_signal 174..179 FT /note="G box" FT misc_signal 350..353 FT /note="GATA box" FT GC_signal 390..395 FT CAAT_signal 411..415 FT GC_signal 416..421 FT GC_signal 431..436 FT misc_signal 515..518 FT /note="GATA box" FT misc_signal 531..534 FT /note="GATA box" FT GC_signal 535..543 FT misc_signal 565..587 FT /note="pyrimidine box" FT TATA_signal 611..617 FT misc_signal 653..656 FT /note="GATA box" FT exon <717..886 FT transit_peptide 717..800 FT CDS join(717..886,966..3135) FT /codon_start=1 FT /product="aconitase" FT /EC_number="4.2.1.3" FT /db_xref="GOA:P49609" FT /db_xref="HSSP:1AMJ" FT /db_xref="InterPro:IPR000573" FT /db_xref="UniProtKB/Swiss-Prot:P49609" FT /protein_id="AAA80494.1" FT /translation="MIAMDRIARIPIARWTSRAFRVSAAARQTPMSPLEAHNELEPVYA FT AIDDRLNTVRSKLNRPLTLAEKVLYGHLDDPERVPVRGETFLKLRPERVALQDATAQMA FT LIQFMASARPQVAVPSTIHCDHLIAAEVGAEEDMAKAKSQNKEVYDFLASAGAKYGLGF FT WKPGSGIIHQIVLENYAFPGLLMIGTDSHTPNAGGLGACAVGVGGADAVDVMVGLPWEL FT KAPKVIGVKLTGKLQEWASPKDVILKVAGILTVKGGTGAIVEYFGEGVDSLSCTGMGTI FT CNMGAEIGATTSMFPYNSRMGDYLKATGRDGIASLADSFSEQLRADENAVYDQLIEINL FT SELEPHINGPFTPDLAHPLSKFKEEVEKNGWPAELTVGLIGSCTNSSYEDMARSASVVK FT QALSHGVKSKSIFNITPGSEQVRATISRDGILDTFTEAGGTVLANACGPCIGQWNRSDV FT PKGTPNSIITSFNRNFSQRNDGNPQTHAFVASPEIVTAMSLAGSLKFNPATDSLQGADG FT AEFKLAAPSGDELPVMGFDPGEDTFQPPSDDSTSILVQIDPDSQRLSFLEPFPAWDGKD FT YTDMPVLIKARGKCTTDHISMAGPWLKFRGHLDNISNNMLIGAVNDENGEINNVKNAVT FT GEYGTVPDTARAYKAEGVKWVVIGDENYGEGSSREHAALEPRHLGGVAVIVKSFARIHE FT TNLKKQGMLPLTFNNPADYDKIDSSDKVSLVGLKNLTPGEPVTMTVTKADGTSMDILLN FT HTFNDEQLEWFRAGSALNKIKIDLGT" FT intron 887..965 FT exon 966..>3247 FT polyA_signal 3242..3247 XX SQ Sequence 3658 BP; 889 A; 909 C; 953 G; 907 T; 0 other; ctcgcagaga cgacaagtcg ggcgacgcct ggagtacaga tgcaggagga gggcgagatt 60 gacggatggg gttagacgag cgtctacttc catcatggga cgcgatgggg ccagaaccaa 120 aaagctattc tgccgatcgc gttcttggca cgctgttatt ggctctcatg gcgcacgtgt 180 ctcaatatcg aggttacatg tgtgcacgct ggatggctaa tcgaatcgcg ttcattgcac 240 tacggtatcc ctcttagccc cggtggctcg gtatagtttt actcgctact gtaagtgcca 300 tcaattggtg atgtgctggc tgatggccag gccgtgatgc tcttcatcag ataaggctat 360 caatggaagc aacttggtgc acttgggttg gccgctgcat ctcgcctggg ccaatggcgg 420 caaagtgtca cgcgcgagcg acggtccgac ccatttcgct tcccgctcgg ccatctgcgc 480 aaaaaacaag ctccagaaaa gcgccacgct cctagatacg agcttgcgta gataggggcg 540 ggcaacggta gacttcaaag ccaacttgtt ctctcccgtt ctgttccatc gtggcaatcg 600 cttgcagctc aatttaagga acacagcttg tgcacagcct cctgcttgaa gcgatactgg 660 ttgctcgcgc aagtctgaga ttcttccagc tcgcttgtca acctccctcg ttcactatga 720 tcgccatgga tcgcatcgcc agaataccca tcgcgcggtg gacgtcgcgt gcattccgcg 780 tctcagcagc agctcgacaa acgccaatgt cccctttgga ggctcacaat gagcttgagc 840 ccgtctatgc tgccatcgat gacagactca acacagtccg atccaagtgc gttgctaatt 900 ttctccgcgt gatccacaga gtttataacc cattgcgctg tactgacatt ctttcttgtc 960 atcaggctca accgccccct tacacttgca gagaaagttc tgtacggtca cctcgatgat 1020 ccggaacgag ttcctgttcg cggtgaaact ttcctcaagt tgcgacccga acgcgttgcg 1080 ctacaggatg caacggcaca gatggcccta attcaattca tggcctctgc aagaccccag 1140 gtcgctgttc catccactat tcactgtgat caccttattg cggcagaagt aggcgccgaa 1200 gaagacatgg ctaaagcaaa gagccagaac aaagaggtat atgatttctt agcgtctgcc 1260 ggcgccaaat acggtctggg cttctggaaa cctggttctg gtattatcca tcagatcgtc 1320 ctcgaaaact atgcgttccc tggtttgctt atgatcggta ctgactccca tacacctaat 1380 gcgggtggtt tgggtgcgtg cgctgttggt gttggaggag cagatgctgt tgatgtcatg 1440 gttggactcc cttgggagtt gaaggcgcca aaggttattg gagtgaaact aactggtaaa 1500 ttacaggaat gggcctcccc gaaggacgtc atcctcaagg ttgctggtat tcttaccgtg 1560 aagggtggaa ccggcgcaat tgttgaatac tttggagaag gtgtcgattc tttgagttgc 1620 actggaatgg gtacaatttg caacatgggg gctgagatcg gtgccaccac gtccatgttc 1680 ccttataaca gtcgcatggg cgactatttg aaggcaactg gtcgcgatgg tattgccagc 1740 ctagcggatt ccttctctga acagcttaga gccgatgaaa acgctgtata cgaccagctg 1800 attgagatca acctatccga actagagcca cacatcaacg gtcccttcac tccggatctt 1860 gctcatccgc tgtccaaatt caaggaagag gtcgagaaga acggctggcc agcagagctt 1920 accgttggtc ttattggctc ctgcaccaat tcatcatatg aagacatggc tcgatcagca 1980 tctgttgtca agcaagctct ctcccatggg gtcaagagca aatccatctt taacattacc 2040 cctggatctg agcaagtacg agctaccata tcaagagatg ggattctcga cacttttact 2100 gaagctggcg gaacagtact tgcaaatgca tgcggtcctt gcattgggca gtggaaccgt 2160 agtgatgtac cgaaaggaac acccaactct attatcacgt cgttcaatcg taacttctct 2220 caaagaaatg acggaaatcc tcagactcat gctttcgttg cctctcccga aattgtcaca 2280 gcgatgtctt tggctggatc gctcaagttc aacccagcaa ccgattcgct tcaaggcgcg 2340 gatggggcgg agtttaaact tgcagcgccg tcaggggatg aactgccggt catgggcttc 2400 gaccctggag aggatacatt ccaaccccct tctgatgaca gtacatctat tctcgtacag 2460 atcgatcccg actcccaaag actgtcattc cttgaaccgt ttccggcatg ggacggaaag 2520 gactatactg acatgccagt tttgattaag gctcgtggaa agtgcactac ggatcatatc 2580 tctatggctg gtccgtggtt gaagttccgt ggtcatcttg acaatatctc caacaacatg 2640 ctcatcggtg ccgtcaatga tgaaaatggg gaaatcaata acgtcaagaa tgctgtaaca 2700 ggagagtatg gaactgttcc ggacactgcg cgggcgtaca aggcggaggg agtgaagtgg 2760 gtggtaattg gtgacgaaaa ctacggtgag ggatctagcc gcgagcacgc tgctttggag 2820 cctcgacacc tgggtggcgt agcggtaatt gtcaaatcgt ttgcccgtat tcatgaaaca 2880 aacttgaaga aacagggaat gcttcctctg actttcaaca acccagccga ttacgataag 2940 attgactcaa gtgacaaagt gtcgcttgtt ggactgaaga acttgacgcc aggtgagcca 3000 gtcacaatga cggtgacgaa ggcagatggc acatcaatgg atattttatt gaaccatacg 3060 ttcaacgacg agcaactaga gtggttcaga gctggttctg ccttgaacaa gatcaagata 3120 gacctgggga cataggacaa atccgcaagg tttaagagcg gaatagagtt ggcgaaacaa 3180 ttatcttatt acaagcactt tttctttgtt cgaatcgtgg tgatagttca gaggttagta 3240 ccgtaaaaca aaatgctgcc cctgagagaa gcagaccttt gttcataccg ctgtacaagg 3300 gtactagata gagatcatct cgtcatcatg aatggcctcg ccgttatttt tctctcgaca 3360 cgcgacaaac aaaattccga gtgtggtacg gtagtaacgt agtaatacca cgggtacacg 3420 atttctcttg ttgaaactgg caacatgccg cggatcagca ggttggttgc ttcgcacggc 3480 acagggtgaa atgggttgtt cttacttgcc atcgttacaa ctaaggacgg ggtcttgggt 3540 gattggtccc aggaacgcca gccctccact tggaattggg gtcaaggttg ggcttcttgg 3600 ccaatggcag ggctgtcttc ctgacaaggg tcccctttgg ttggccccaa cttccgtt 3658 // |
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