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EBI DbfetchID U11687; SV 1; linear; genomic DNA; STD; PRO; 4000 BP. XX AC U11687; XX DT 08-SEP-1994 (Rel. 40, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 6) XX DE Bacillus subtilis 168 jofA, jofB, MssA homolog (jofC) and ribosomal protein DE S1 homolog (jofD) genes, complete cds, and joeB gene, partial cds. XX KW . XX OS Bacillus subtilis OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RP 1-4000 RA Sorokin A., Azevedo V., Zumstein E., Galleron N., Ehrlich D., Serror P.; RT "Bacillus subtilis chromosome between spoIIA and kdg loci"; RL Unpublished. XX RN [2] RP 1601-4000 RX PUBMED; 7704259. RA Sorokin A., Serror P., Pujic P., Azevedo V., Ehrlich S.D.; RT "The Bacillus subtilis chromosome region encoding homologues of the RT Escherichia coli mssA and rpsA gene products"; RL Microbiology (Reading, Engl.) 141(Pt 2):311-319(1995). XX RN [3] RP 1-4000 RA Sorokin A.; RT ; RL Submitted (29-JUN-1994) to the EMBL/GenBank/DDBJ databases. RL Alexei Sorokin, Institut de Biotechnologie, Laboratoire de Genetique RL Microbienne, INRA - Domain de Vilvert, Jouy-en-Josas 78352, France XX FH Key Location/Qualifiers FH FT source 1..4000 FT /organism="Bacillus subtilis" FT /map="210 degrees" FT /strain="168" FT /mol_type="genomic DNA" FT /db_xref="taxon:1423" FT CDS <1..698 FT /codon_start=3 FT /transl_table=11 FT /gene="joeB" FT /product="unknown" FT /label=joeB FT /db_xref="GOA:P38490" FT /db_xref="InterPro:IPR014239" FT /db_xref="UniProtKB/Swiss-Prot:P38490" FT /citation=[1] FT /protein_id="AAA85146.1" FT /translation="ISEQEAKQIAERFAPDDNYSIKVVKSGKKTNRDVYSISMKDPDHK FT AVIYMDITKKGGHPVYLIQNREVKDQKISLNDGSNRALAFLKKNGFETDDLEIDESAQY FT DKIGVFSYVPVENKVRMYPEAIRMKVALDDGEVVGFSARDFLTSHRKRTIPKPAITEAE FT AKSKLNKNVQVRETRLALITNELGQEVLCYEMLGTIENDTFRMYINAKDGSEEKVEKLK FT NAEPIYKDL" FT terminator 706..730 FT /standard_name="transcription terminator" FT /citation=[2] FT /citation=[1] FT CDS 791..1444 FT /codon_start=1 FT /transl_table=11 FT /gene="jofA" FT /product="unknown" FT /label=jofA FT /db_xref="InterPro:IPR009875" FT /db_xref="UniProtKB/Swiss-Prot:P38491" FT /citation=[1] FT /protein_id="AAA85147.1" FT /translation="MIEIGENVLLEYIEENELKKAKSKAVSIENNELLIAYPVDVVTGR FT TVILHNDMEVTVEFVGKDEVPYRFISRIKGKVKDKLQMICLEMPPREKMKRIQRRQYVR FT TDAVLDVQIQPGNEEEIRTLSYNISAGGIAVVLADGLSFQSGESLRLIIRLPEEEHTRQ FT IETEAVVRRIFNDPKSEKRKMTLEYSEIAAGDQQALLQYCIRRQLNKRRKARME" FT CDS 1489..1665 FT /codon_start=1 FT /transl_table=11 FT /gene="jofB" FT /product="unknown" FT /label=jofB FT /db_xref="UniProtKB/Swiss-Prot:P38492" FT /citation=[1] FT /protein_id="AAA85148.1" FT /translation="MKTFERLLIKLLFIQAIILLGVQFLFHYQHIEPYVSKVIQYEGVD FT KMEENNRIETFKH" FT CDS 1744..2418 FT /codon_start=1 FT /transl_table=11 FT /gene="jofC" FT /product="unknown" FT /label=jofC FT /note="similar to the Escherichia coli mssA gene product FT (smbA suppressor), Swiss-Prot Accession Number P23863" FT /db_xref="GOA:P38493" FT /db_xref="HSSP:1CKE" FT /db_xref="InterPro:IPR011994" FT /db_xref="UniProtKB/Swiss-Prot:P38493" FT /citation=[2] FT /citation=[1] FT /protein_id="AAA85149.1" FT /translation="MEKKLSIAIDGPAAAGKSTVAKIVAEKKSYIYIDTGAMYRAITYA FT ALQENVDLTDEEKLAELLKRTDIELITTKDGQKVFVNGTDVTEAIRTDEISNQVSIAAK FT HRSVREEMVKRQQQLGEKGGVVMDGRDIGTHVLPNAEVKIFLLASVEERAKRRYEENVK FT KGFDVNYETLIEEIARRDKLDSEREVSPLRKAEDALEIDTTSLSIQEVADKILEAVEQK FT SR" FT terminator 2417..2437 FT /standard_name="transcription terminator" FT /citation=[2] FT /citation=[1] FT -35_signal 2473..2478 FT /citation=[2] FT /citation=[1] FT -10_signal 2497..2502 FT /citation=[2] FT /citation=[1] FT CDS 2651..3799 FT /codon_start=1 FT /transl_table=11 FT /gene="jofD" FT /product="unknown" FT /label=jofD FT /note="similar to the Escherichia coli S1 ribosomal FT protein, Swiss-Prot Accession Number P02349" FT /db_xref="GOA:P38494" FT /db_xref="HSSP:1SRO" FT /db_xref="InterPro:IPR000110" FT /db_xref="UniProtKB/Swiss-Prot:P38494" FT /citation=[2] FT /citation=[1] FT /protein_id="AAA85150.1" FT /translation="MTEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIP FT ISELSSLHVEKASDVVKVDDELDLKVTKVEDDALILSKRAVDADRAWEDLEKKFETKEV FT FEAEVKDVVKGGLVVDIGVRGFIPASLVEAHFVEDFTDYKGKTLSLLVVELDRDKNRVI FT LSHRAVVESEQANKKQELLQSLEVGSVLDGKVQRLTDFGAFVDIGGIDGLVHISQLSHS FT HVEKPSDVVEEGQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQ FT RLVSFGAFVEILPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLS FT MRELEETPKADQEDYRQYQAKEETSTGFQLGDLIGDKLNKLK" FT misc_feature 3212..3421 FT /gene="jofD" FT /standard_name="S1 motif" FT /function="RNA binding" FT /note="S1 motif encoding region" FT /citation=[2] FT /citation=[1] FT misc_feature 3467..3676 FT /gene="jofD" FT /standard_name="S1 motif" FT /function="RNA binding" FT /note="S1 motif encoding region" FT /citation=[2] FT /citation=[1] FT terminator 3952..3988 FT /standard_name="transcription terminator" FT /citation=[2] FT /citation=[1] XX SQ Sequence 4000 BP; 1371 A; 695 C; 922 G; 1012 T; 0 other; aaatttccga acaggaagca aaacaaattg ctgagcgctt tgccccagat gacaattatt 60 caattaaagt ggtaaagagc ggaaaaaaaa caaatcgcga tgtatatagc atcagcatga 120 aagacccaga ccataaagca gtgatttata tggatattac gaagaagggc gggcatccgg 180 tatacttgat ccaaaacaga gaagtgaaag atcagaaaat cagtttaaat gacggatcga 240 accgagcgct tgcattttta aagaaaaacg gatttgaaac agatgatttg gaaattgatg 300 aaagtgccca atatgataaa atcggtgtat tttcatatgt tcctgttgaa aataaagtcc 360 ggatgtaccc cgaggcaatt cgtatgaaag tggccttgga tgacggtgag gttgtcggct 420 tttcagcaag agacttcctc acatctcaca gaaaaagaac catacctaag cctgcaatta 480 ctgaagcaga ggcaaagtct aaattaaata aaaatgtaca agtgagagaa acaaggctcg 540 ctttgattac aaatgaacta ggtcaagaag tgttatgcta cgaaatgctt gggacaattg 600 aaaatgacac attcagaatg tatatcaatg ccaaagacgg atcggaagaa aaggttgaaa 660 aactaaaaaa tgcagaacct atatataaag acctataaaa acaggaggaa aggactaaat 720 gtcttttcct ttttttcatt acgtgcttta ataaaaacgt gagtatattg aatgcgaaag 780 agtgaagtca atgatagaga ttggagaaaa tgtactttta gaatatatag aagaaaatga 840 attgaaaaag gcaaaaagca aggcggtcag catcgaaaac aatgaacttt tgatcgcgta 900 tcctgttgat gtagttacag ggcgaactgt gattttacat aacgatatgg aagtaacggt 960 agagtttgtg ggaaaagacg aagttcctta tcgctttata agccgtataa aaggtaaagt 1020 gaaggacaaa cttcaaatga tctgtcttga aatgcctccc cgtgaaaaaa tgaaaagaat 1080 ccagcgccgc caatatgtaa gaactgatgc ggtattagat gtgcaaattc agccgggaaa 1140 tgaagaagag atccgcacac tatcctataa catcagtgca ggcggcatcg ccgtggtttt 1200 agctgatggc ctttcttttc aatcggggga atcattgcgc ctgatcatcc gtcttcctga 1260 agaggagcac acacgtcaaa tagaaacaga agcagttgtc agacgaatct ttaatgaccc 1320 caagtcagaa aaacgaaaaa tgactttaga gtattcagaa attgcagcag gtgaccagca 1380 ggctttgctt caatactgca tcaggcgcca gttaaataag agaagaaagg cccgaatgga 1440 ataaacatcg gcaaacactt ccatactatt tgtaatggag gtgctccaat gaaaacattt 1500 gaacggctgc tgatcaaatt attgttcatt caggccatca ttttacttgg tgtccaattt 1560 ctttttcact atcagcatat tgaaccatac gtatcaaaag tgattcaata tgaaggggtg 1620 gataaaatgg aggaaaacaa taggattgaa accttcaaac attaattatt catcaatttt 1680 tcaccctttt tcataaagtt cgtgatacaa tccttagagg agaaaagagc aaggagagga 1740 attatggaaa agaaattatc gattgcaatc gacggcccgg cagctgcggg gaaaagcacc 1800 gttgccaaaa ttgtggctga gaaaaaatcg tacatatata ttgatacagg agcgatgtat 1860 cgggcgatta cgtacgcggc tttacaggaa aacgttgatc tgacagatga agaaaaactg 1920 gctgagctgc taaagcggac agacattgag ctgattacaa caaaagatgg acaaaaagtg 1980 tttgtaaacg gcaccgatgt aactgaggcg atcagaacag atgaaatcag caaccaagtt 2040 tcaattgcgg ccaagcacag aagtgtcaga gaagaaatgg tgaaacgcca gcagcagctt 2100 ggggaaaaag gcggcgtcgt catggatggt cgtgacatcg ggacgcatgt gctgccaaat 2160 gcagaagtaa aaatctttct tttggcatct gtggaagaga gagcgaaacg ccgttatgaa 2220 gaaaatgtga aaaaaggctt tgatgtcaac tacgaaacat taattgagga aattgcaaga 2280 agagacaagc ttgattcaga gcgcgaagta tctccgctgc gtaaagcaga agacgctctt 2340 gaaatcgaca cgacatcgct ttccattcaa gaggtagctg ataaaatcct cgaggctgtg 2400 gagcaaaagt cccgctgagg atggcaaatg ccactttttt tgaatttttc aacgaagata 2460 gaatgttatt gcttgacaaa cctgtccttt tattagaagt taatactaat aaaacttttt 2520 attgatcatt caaaaaactt ttttggatga ttctttaata catattcggc taaaagcggg 2580 catgttatat gttcagcttt caaaccgttt taattaagct gtgtaggttt ggaccaagga 2640 ggttattcaa atgacagagg aaatgaatca aattgatgtt caagtgccag aggttggaga 2700 tgtagttaaa gggattgtga caaaggtaga agacaaacat gtagatgtag aaattatcaa 2760 tgtcaaacaa tccggtatta ttccaatcag tgaattatca agtcttcatg tagagaaagc 2820 atcggatgtt gttaaagtag acgacgagct tgacctgaaa gtaacaaaag tggaagacga 2880 tgctttgatt ttatctaaac gtgctgttga tgcagaccgc gcttgggaag accttgagaa 2940 aaaatttgaa acaaaagaag tgtttgaagc tgaagtgaaa gatgtcgtga aaggcggcct 3000 tgtcgttgat atcggcgttc gcggttttat tccggcatca cttgttgaag cacatttcgt 3060 tgaagacttc actgactata aaggaaaaac actgtcactg ctcgttgtag agcttgaccg 3120 tgataaaaac cgcgtgatcc tttcacaccg tgctgttgtt gaaagtgaac aagcgaataa 3180 aaaacaagaa cttcttcagt ctcttgaagt tggaagtgta cttgatggca aagtacagcg 3240 cctgactgac tttggcgcgt ttgttgatat tggcggcatc gacggacttg tacacatttc 3300 acagctttcc cactctcatg tagagaagcc gtctgacgtt gttgaagagg gacaagaagt 3360 aaaagtgaaa gtgttatcgg ttgaccgtga taatgaacgt atttctttat cgatcaaaga 3420 tacactgcct ggaccttgga accaaatcgg cgaaaaagtg aagcctggcg atgtgcttga 3480 aggaactgta cagcgtcttg taagcttcgg tgcctttgtt gaaatccttc caggtgttga 3540 aggtctcgtt catatttctc aaatttccaa taaacacatc ggcacgccgc atgaagtcct 3600 tgaagaagga cagactgtaa aagtgaaggt tcttgatgtg aatgaaaatg aggagcgcat 3660 ttcattaagc atgcgtgaac ttgaagaaac gcctaaagct gaccaggaag attaccgtca 3720 atatcaagcg aaggaagaaa caagcactgg cttccagctt ggagatctga tcggagataa 3780 gctgaataaa ctaaaataat tggtgataaa cgtgactcga gcagaacgaa aaagacaaca 3840 catcaatcat gccttgtcca tcggccagaa gcgggaaaca ggtcttgatg atattacgtt 3900 tgttcacgtc agtctgcccg atcttgcatt agaacaagta gatatttcca caaaaatcgg 3960 cgaactttca agcagttcgc cgatttttat caatgcaatg 4000 // |
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