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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U10496; SV 1; linear; genomic DNA; STD; PRO; 658 BP.
XX
AC   U10496;
XX
DT   10-JUN-1995 (Rel. 44, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 7)
XX
DE   Buchnera aphidicola from Acyrthosiphon pisum shikimate dehydrogenase (aroE)
DE   gene, partial cds, tRNA-glu gene, complete sequence, and 23S rRNA gene,
DE   partial sequence.
XX
KW   .
XX
OS   Buchnera aphidicola
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Buchnera.
XX
RN   [1]
RP   1-658
RX   DOI; 10.1016/0378-1119(94)00910-K
RX   PUBMED; 7535281.
RA   Rouhbakhsh D., Baumann P.;
RT   "Characterization of a putative 23S-5S rRNA operon of Buchnera aphidicola
RT   (endosymbiont of aphids) unlinked to the 16S rRNA-encoding gene";
RL   Gene 155(1):107-112(1995).
XX
RN   [2]
RP   1-658
RA   Rouhbakhsh D.;
RT   ;
RL   Submitted (09-JUN-1994) to the EMBL/GenBank/DDBJ databases.
RL   Dadbeh Rouhbakhsh, Microbiology, University of California at Davis, Davis,
RL   CA 95616, USA
XX
DR   RFAM; RF00005; tRNA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..658
FT                   /organism="Buchnera aphidicola"
FT                   /host="Acyrthosiphon pisum"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9"
FT   CDS             <1..57
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="aroE"
FT                   /product="shikimate dehydrogenase"
FT                   /db_xref="GOA:Q44607"
FT                   /db_xref="InterPro:IPR006151"
FT                   /db_xref="InterPro:IPR011342"
FT                   /db_xref="InterPro:IPR013708"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q44607"
FT                   /protein_id="AAA79125.1"
FT                   /translation="SFFLWHNVLPEIVILLTF"
FT   -35_signal      151..156
FT   -10_signal      169..174
FT   tRNA            215..287
FT                   /product="tRNA-Glu"
FT                   /anticodon=(pos:249..251,aa:Glu)
FT                   /note="codon recognized: GAA"
FT   rRNA            451..>658
FT                   /product="23S ribosomal RNA"
XX
SQ   Sequence 658 BP; 250 A; 98 C; 95 G; 215 T; 0 other;
     tctttttttc tatggcataa tgtgcttcca gaaatagtta tattattgac cttttaaata        60
     aataattttt ttaaaaaaat aaacaataaa acttaattta ctaatttttt catatttttt       120
     taatatttta actaataata cagaaatcac ttgactcttt tttttgatct gttatttatt       180
     atatcgttaa attaaaaaat aattttattc aatagtcccc ttcgtctaga ggtctaggac       240
     atcgcccttt cacggcggca acaggggttc aaatccccta ggggacgata aataaaaaat       300
     atttataaaa atattatata ctaatttaaa ttattgtgtt atcctcaaaa taactttaaa       360
     agaaaagtta acatttaaca caaaaagctc tttaaaaatt cggaaaaaca agcatataat       420
     ttattttttt aaaaaaacac ctgtgggttg taaggttaag caaataagcg tacatggtga       480
     atgccttggc agtcagagcc gaagaaggac gtgctaatct gcgaaaagcg tcggcaagct       540
     gatatgaagc gcaataaccg tcgatatccg aatggggaaa cccgatgcaa tattgcatct       600
     tattaactga atcaaataag ttaataaagc aaaccaaggg aactgaaaca tctaagta         658
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