 |
|
EBI DbfetchID U10036; SV 1; linear; genomic DNA; STD; PRO; 5539 BP. XX AC U10036; XX DT 05-AUG-1994 (Rel. 40, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Methanobacterium thermoautotrophicum delta H methyl coenzyme M reductase I DE beta subunit (mcrB), methyl coenzyme M reductase I D protein (mcrD), methyl DE coenzyme M reductase I C protein (mcrC), methyl coenzme M reductase I DE gamma subunit (mcrG) and methyl coenzyme M reductase I alpha subunit DE (mcrA) genes, complete cds, and N5-methtetrahydromethanopterin: coenzyme M DE methyltransferase 28 kDa protein (mtrE) gene, partial cds. XX KW . XX OS Methanothermobacter thermautotrophicus OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; OC Methanobacteriaceae; Methanothermobacter. XX RN [1] RP 1-5539 RX PUBMED; 7929010. RA Pihl T.D., Sharma S., Reeve J.N.; RT "Growth phase-dependent transcription of the genes that encode the two RT methyl coenzyme M reductase isoenzymes and RT N5-methyltetrahydromethanopterin:coenzyme M methyltransferase in RT Methanobacterium thermoautotrophicum delta H"; RL J. Bacteriol. 176(20):6384-6391(1994). XX RN [2] RP 1-5539 RA Pihl T.; RT ; RL Submitted (25-MAY-1994) to the EMBL/GenBank/DDBJ databases. RL Todd Pihl, Microbiology, Ohio State University, 484 W. 12th Avenue, RL Columbus, OH 43210-1292, USA XX FH Key Location/Qualifiers FH FT source 1..5539 FT /organism="Methanothermobacter thermautotrophicus" FT /strain="delta H" FT /mol_type="genomic DNA" FT /db_xref="taxon:145262" FT CDS 538..1869 FT /codon_start=1 FT /transl_table=11 FT /gene="mcrB" FT /product="methyl coenzyme M reductase I beta subunit" FT /db_xref="GOA:O27236" FT /db_xref="HSSP:1HBN" FT /db_xref="InterPro:IPR003179" FT /db_xref="UniProtKB/Swiss-Prot:O27236" FT /protein_id="AAA73441.1" FT /translation="MAKFEDKVDLYDDRGNLVEEQVPLEALSPLRNPAIKSIVQGIKRT FT VAVNLEGIENALKTAKVGGPACKIMGRELDLDIVGNCESIAAAAKEMIQVTEDDDTKVE FT LLGGGKRALVQVPSARFDVAAEYSAAPLVTATAFVQAIINEFDVSMYDANMVKAAVLGR FT YPQSVEYMGANIATMLDIPQKLEGPGYALRNIMVNHVVAATLKNTLQAAALSTILEQTA FT MFEMGDAVGAFERMHLLGLAYQGMNADNLVFDLVKANGKEGTVGSVIADLVERALEDGV FT IKVEKELTDYKVYGTDDLAMWNAYAAAGLMAATMVNQGAARAAQGVSSTLLYYNDLIEF FT ETGLPGVDFGKVEGTAVGFSFFSHSIYGGGGPGIFNGNHIVTRHSKGFAIPCVAAAMAL FT DAGTQMFSPEATSGLIKEVFSQVDEFREPLKYVVEAAAEIKNEI" FT CDS 1901..2266 FT /codon_start=1 FT /transl_table=11 FT /gene="mcrD" FT /product="methyl coenzyme M reductase I D protein" FT /db_xref="GOA:Q50490" FT /db_xref="InterPro:IPR003901" FT /db_xref="UniProtKB/TrEMBL:Q50490" FT /protein_id="AAA73442.1" FT /translation="MDVQIFPHRLLGADTTEKLLNRLEDISGVKRMVIHGQRLPPEDHP FT DRRIISVKGHEFELQVKTGRVLLHIEDEDTIADYKRVCEDLLPFGYDLTPGKYIRTQKT FT VTDEIKYGEDLDKVPEN" FT CDS 2338..2934 FT /codon_start=1 FT /transl_table=11 FT /gene="mcrC" FT /product="methyl coenzyme M reductase I C protein" FT /db_xref="GOA:O27234" FT /db_xref="InterPro:IPR007687" FT /db_xref="UniProtKB/Swiss-Prot:O27234" FT /protein_id="AAA73443.1" FT /translation="MIGKCTHVVDCRETMGMGEGGGIAQRGTFAQCGSEVLAVAMSPGR FT RHITKPVCEITFALREANIMTSTIVLNAGAGVPQDAPSAGAGSLFGLTPAEVEQMKRHK FT LLVVHLGGVKNHITYKARLILRNVDRPCIIICEYPVDFEDFAKIGVRTRAVMPDEGKTK FT GTIVDIVSGVIRGETCPQEKLDEIIRKVKLALGGA" FT CDS 2936..3685 FT /codon_start=1 FT /transl_table=11 FT /gene="mcrG" FT /product="methyl coenzme M reductase I gamma subunit" FT /db_xref="GOA:O27233" FT /db_xref="HSSP:1HBN" FT /db_xref="InterPro:IPR003178" FT /db_xref="UniProtKB/Swiss-Prot:O27233" FT /protein_id="AAA73444.1" FT /translation="MAQYYPGTSKVAQNRRNFCNPEYELEKLREISDEDVVKILGHRAP FT GEEYPSVHPPLEEMDEPEDAIREMVEPIDGAKAGDRVRYIQFTDSMYFAPAQPYVRSRA FT YLCRYRGADAGTLSGRQIIETRERDLEKISKELLETEFFDPARSGVRGKSVHGHSLRLD FT EDGMMFDMLRRQIYNKDTGRVEMVKNQIGDELDEPVDLGEPLDEETLMNKTTIYRVDGE FT AYRDDTDAVEIMQRIHVLRSQGGYNPE" FT CDS 3705..5357 FT /codon_start=1 FT /transl_table=11 FT /gene="mcrA" FT /product="methyl coenzyme M reductase I alpha subunit" FT /db_xref="GOA:O27232" FT /db_xref="HSSP:1HBN" FT /db_xref="InterPro:IPR015823" FT /db_xref="UniProtKB/Swiss-Prot:O27232" FT /protein_id="AAA73445.1" FT /translation="MADKLFINALKKKFEESPEEKKTTFYTLGGWKQSERKTEFVNAGK FT EVAAKRGIPQYNPDIGTPLGQRVLMPYQVSTTDTFVEGDDLHFVNNAAMQQMWDDIRRT FT VIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAVVQEHMVETHPALVADSYV FT KVFTGNDEIADEIDPAFVIDINKQFPEDQAETLKAEVGDGIWQVVRIPTIVSRTCDGAT FT TSRWSAMQIGMSMISAYKQAAGEAATGDFAYAAKHAEVIHMGTYLPVRRARGENEPGGV FT PFGYLAEICQSSRVNYEDPVRVSLDVVATGAMLYDQIWLGSYMSGGVGFTQYATAAYTD FT NILDDFTYFGKEYVEDKYGLCEAPNTMDTVLDVASEVTFYGLEQYEEYPALLEDQFGGS FT QRAAVVAAAAGCSTAFATANAQTGLSGWYLSMYLHKEQHSRLGFYGYDLQDQCGASNVF FT SIRGDEGLPLELRGPNYPNYAMNVGHQGEYAGISQAPHAARGDAFVFNPLVKIAFADDN FT LVFDFTNVRGEFAKGALREFEPAGERALITPAK" FT CDS 5441..>5539 FT /codon_start=1 FT /transl_table=11 FT /gene="mtrE" FT /product="N5-methtetrahydromethanopterin: coenzyme M FT methyltransferase 28 kDa protein" FT /db_xref="GOA:O27231" FT /db_xref="InterPro:IPR005780" FT /db_xref="UniProtKB/Swiss-Prot:O27231" FT /protein_id="AAA73446.1" FT /translation="MDPMITGLGVVALMGAAATIAGAAEDLESDVGS" XX SQ Sequence 5539 BP; 1687 A; 1315 C; 1414 G; 1123 T; 0 other; gaattcatta ccaatctctg caacaccctt tccacaagtt tcacatccaa ccctacctgg 60 tgaacagttt ttacacccaa atgcttcaaa ttcaccaact ttacggaagt agcagtacct 120 gcagaatccc ctgcagtcct ttccaggtat accacctaaa tcagctatta tctgcatgtc 180 actctctctg tggagagctc taaatataat ttattaccgg ctctggaccc atggggcagt 240 gactgtgaat gaccagagga tgattattat tactccctgc tgatgatact ctgctttggg 300 atgatcacaa aaatcaacgc caccatataa aaaatccaga aaacccaaaa aaaggtgttt 360 ttacatataa agctttcgac ttgattcaga aagaaatctt aattaattat aatcaagtta 420 aatatgcatc gtatactaag acgggtgttt taacaccctc caagggcctt attgcctttt 480 ccaaaaaggg gggtcctgga tgtttagtat acggaaatga ttgttaggag ggaaaaaatg 540 gcgaagtttg aggataaggt cgacttgtac gacgacagag gcaacctcgt cgaagaacag 600 gtgccattag aagctctgag cccacttaga aaccccgcca ttaaaagcat tgtgcagggg 660 attaagagga cagtggctgt gaaccttgaa ggtatagaaa acgccctgaa gacagctaag 720 gtcggcggac ctgcctgtaa gataatgggc cgtgaactcg acctcgacat agtcgggaac 780 tgcgagtcaa tagcagccgc tgcaaaggaa atgatacagg tgaccgagga cgacgacaca 840 aaggtcgagc tccttggcgg aggtaaaagg gcactcgtac aggtcccaag tgcaaggttc 900 gatgttgcag cagaatactc tgcagcacca ctcgtaaccg ccacagcatt tgtccaggcc 960 ataatcaacg aatttgatgt tagcatgtac gatgctaaca tggttaaagc agccgttctg 1020 ggaagatacc cacagtctgt ggagtacatg ggggcaaaca tagcaacaat gctggacatt 1080 ccacagaaac tggaaggccc aggatacgca ctgaggaaca tcatggtgaa ccatgttgtt 1140 gcagccacac tcaaaaacac actccaggca gcagcactat caaccatact cgaacagaca 1200 gcaatgtttg agatgggtga cgctgtagga gcatttgaga ggatgcacct ccttggactt 1260 gcataccagg gaatgaacgc agacaacctg gtctttgacc ttgttaaggc caacggtaag 1320 gaaggtaccg tgggttcagt catagcagac ctggttgaaa gggccctgga agatggtgtc 1380 ataaaggttg agaaggaact cacagactac aaggtctacg gcacagacga ccttgcaatg 1440 tggaacgcct atgcagcagc cgggctcatg gcagccacaa tggttaacca gggtgcagca 1500 agggcagcac agggtgtatc atcaaccctg ctctactaca acgacctcat agaattcgaa 1560 acaggactac caggtgttga cttcggtaaa gtggaaggta ccgctgtagg attttcattc 1620 ttcagccact ccatctacgg tggaggtgga ccaggtatct tcaacggaaa ccacatcgtt 1680 acaaggcaca gtaagggatt cgccatacca tgtgtggcag ctgcaatggc acttgacgca 1740 ggaacccaga tgttctcccc agaagcaacc tctggactca taaaagaagt attcagccag 1800 gttgacgagt tccgagaacc actcaaatat gttgtggagg cagcagctga gattaaaaac 1860 gaaatttaaa taatctctca gaactggggg caaaaaacca atggacgttc agatatttcc 1920 acaccggcta ctaggggctg acaccaccga gaaactcctt aaccgccttg aggacatcag 1980 cggcgttaag agaatggtga tacatggaca gcgcctgcca ccagaggacc accctgacag 2040 acgcataatc agcgttaaag gtcatgaatt cgagcttcag gtgaaaacag gccgagtact 2100 ccttcacata gaggacgagg acacaatagc tgactacaaa agggtctgtg aggatctcct 2160 gccctttgga tacgatctta ctcctggaaa atatataagg acgcagaaga cagtgacgga 2220 tgagataaag tatggtgagg accttgataa ggtgccggag aactaatagg tctcacagac 2280 cagaacgccc ggctcagtga aagggccacc ataataaaaa ggaaaaagga gcattagatg 2340 atcggaaagt gcactcacgt tgttgactgc agagaaacaa tgggaatggg tgaaggggga 2400 ggaatagccc agaggggcac cttcgcccag tgtggaagtg aagtccttgc agtggcaatg 2460 tcacctggca gacgccacat cacaaagcct gtctgcgaga taacattcgc cctcagggaa 2520 gccaacataa tgaccagcac catagtcctg aatgcaggtg caggagtacc gcaggacgct 2580 ccaagcgctg gagcaggaag tctcttcggt ctgacaccgg ctgaagtcga gcagatgaag 2640 aggcacaaac tcctggtcgt acaccttgga ggagtcaaaa atcacattac ctacaaggcg 2700 cgcctcatac tcaggaacgt cgacagacca tgcataatca tctgcgaata ccccgtggac 2760 ttcgaggact ttgcaaagat aggtgtaagg acaagggctg tcatgccaga tgaaggaaaa 2820 acaaagggca ccatcgttga cattgtgagt ggagtcataa gaggagaaac ctgtccccag 2880 gaaaaacttg atgagattat aagaaaggtt aagttagcat taggaggtgc atgatatggc 2940 acaatactat cccggaacaa gtaaggttgc tcagaacaga aggaatttct gtaaccctga 3000 atacgaactc gaaaagctga gagaaatctc agatgaagat gtagtaaaga ttctgggtca 3060 cagggcccca ggggaagaat atccaagtgt tcacccacca ctggaagaga tggatgaacc 3120 agaggacgca ataagagaaa tggttgaacc aatagacggt gcaaaggccg gtgacagggt 3180 ccgatacata cagttcacag actcaatgta ctttgctcca gcacagccat acgtacgatc 3240 aagggcatac ctctgcaggt acaggggtgc agacgcaggt acactctcag gacgtcagat 3300 catcgagacc agggagaggg accttgaaaa gatatccaag gaactccttg aaacagaatt 3360 ctttgaccct gcaagatcag gtgtcagagg taaatctgtc cacggacact cactccgtct 3420 cgacgaagac ggtatgatgt tcgacatgct gagaaggcag atctacaaca aggacaccgg 3480 cagagtcgaa atggtcaaga accagatcgg tgacgaactc gacgaacccg tggaccttgg 3540 tgaaccactg gatgaggaaa ccctcatgaa caaaacaacc atctaccgtg tggatggtga 3600 agcctaccgt gatgatacag acgccgtgga gatcatgcag aggatccacg ttttaagatc 3660 acagggaggg tacaacccag aataatccgg gggaggtgta gattatggct gacaaattgt 3720 tcataaatgc tttaaagaaa aaatttgaag aatcccctga agagaagaaa accacatttt 3780 acacacttgg tggctggaaa cagtccgagc gaaaaaccga gtttgtgaac gctggtaaag 3840 aagtggcagc aaagaggggc ataccccagt acaaccctga cataggtact ccgctgggtc 3900 agagggtact catgccctac caggtctcaa caacagacac cttcgttgaa ggtgacgacc 3960 tccacttcgt aaacaacgct gccatgcagc agatgtggga cgacataaga agaaccgtta 4020 tagttggttt aaaccatgcc cacgccgtta tagaaaagag gctgggtaag gaggtcacac 4080 cagagaccat aacccactac ctggaaacag tgaaccacgc aatgcccggt gcagctgtcg 4140 tccaggaaca catggtggaa acccacccag cactggtggc agacagctac gtcaaggtct 4200 tcacaggtaa cgatgaaatc gcagatgaaa ttgaccctgc attcgtcata gacatcaaca 4260 aacagttccc agaggaccag gcagaaaccc tcaaggcaga ggttggagac ggaatctggc 4320 aggtcgtcag gatcccaacc atagtctcaa ggacctgtga cggtgcaaca acctcacgat 4380 ggtccgccat gcagataggt atgtccatga tctcagccta caaacaggca gcaggtgaag 4440 ccgcaacagg ggacttcgca tacgctgcaa aacacgctga agttatacac atgggtacat 4500 acctgcctgt gagacgtgca aggggtgaaa acgaacctgg tggtgtgcca ttcggttacc 4560 ttgctgagat ctgtcagagc tcaagggtca actacgagga ccctgtcagg gtgtcacttg 4620 acgttgtggc aaccggtgca atgctctacg accagatctg gcttggctca tacatgtcag 4680 gtggtgtagg attcacccag tacgcaacag cagcctacac agacaacatc ctcgacgact 4740 tcacctactt cggtaaggag tacgtggagg acaaatatgg actctgtgag gcaccaaaca 4800 ccatggacac agtcctggac gttgcgagtg aggtcacatt ctacggactt gaacagtacg 4860 aggaataccc tgcactcctc gaagaccagt ttggtggatc ccagagggcg gcagtcgttg 4920 cagctgcagc tggatgttcc acagccttcg caacagcaaa tgcccagaca ggtctcagcg 4980 gatggtacct ctcaatgtac ctgcacaagg agcagcactc caggctcgga ttctacggtt 5040 acgacctcca ggaccagtgt ggtgcatcca acgtcttctc aataaggggc gacgagggac 5100 tgccactgga gcttcgtgga cctaactatc caaactacgc catgaacgtg ggtcaccagg 5160 gtgaatacgc cggtatatca caggcaccac acgctgcccg tggagacgcc ttcgtgttca 5220 acccactggt gaaaatagca tttgcagacg acaacctcgt cttcgacttc accaacgtac 5280 gtggcgagtt cgccaaaggt gctctgcgag agttcgaacc agccggtgaa agagcactca 5340 taacacctgc aaaatagatt aacgaaggtg cattgcacaa actttttaag tgtaatgcac 5400 ctaatttttt ttattcaaaa aaataaaagg aggaagaaat atggacccta tgataacagg 5460 tttaggtgtt gtagctctca tgggtgcagc tgcaaccata gcaggagccg cagaggactt 5520 agagtctgac gtaggatcc 5539 // |
|