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EBI DbfetchID U09990; SV 1; linear; genomic DNA; STD; PRO; 6630 BP. XX AC U09990; XX DT 05-AUG-1994 (Rel. 40, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Methanobacterium thermoautotrophicum delta H methyl coenzyme M reductase II DE beta subunit (mrtB) gene, methyl coenzyme M reductase II D (mrtD) gene, DE methyl coenzyme M reductase II gamma subunit (mrtG) gene, methyl coenzyme M DE reductase II alpha subunit (mrtA) gene, complete cds, dihydro-orotase DE (pyrC) gene, partial cds. XX KW . XX OS Methanothermobacter thermautotrophicus OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; OC Methanobacteriaceae; Methanothermobacter. XX RN [1] RP 1-6630 RX PUBMED; 7929010. RA Pihl T.D., Sharma S., Reeve J.N.; RT "Growth phase-dependent transcription of the genes that encode the two RT methyl coenzyme M reductase isoenzymes and RT N5-methyltetrahydromethanopterin:coenzyme M methyltransferase in RT Methanobacterium thermoautotrophicum delta H"; RL J. Bacteriol. 176(20):6384-6391(1994). XX RN [2] RP 1-6630 RA Sharma S.; RT ; RL Submitted (24-MAY-1994) to the EMBL/GenBank/DDBJ databases. RL Susmita Sharma, Microbiology, The Ohio State University, 484 West 12th RL Avenue, Columbus, OH 43210-1292, USA XX FH Key Location/Qualifiers FH FT source 1..6630 FT /organism="Methanothermobacter thermautotrophicus" FT /strain="delta H" FT /mol_type="genomic DNA" FT /db_xref="taxon:145262" FT CDS 452..1783 FT /codon_start=1 FT /transl_table=11 FT /gene="mrtB" FT /product="methyl coenzyme M reductase II beta subunit" FT /db_xref="GOA:P21111" FT /db_xref="HSSP:1HBN" FT /db_xref="InterPro:IPR003179" FT /db_xref="UniProtKB/Swiss-Prot:P21111" FT /protein_id="AAA73436.1" FT /translation="MPMYEDRIDLYGADGKLLEEDVPLEAVSPLKNPTIANLVSDVKRS FT VAVNLAGIEGSLKKAALGGKSNFIPGREVELPIVENAEAIAEKVKRLVQTSEDDDTNIR FT LINNGQQILVQVPTTRMGVAADYTVSALVTGAAVVQAIIDEFDVDMFDANAVKTAVMGR FT YPQTVDFTGANLSTLLGPPVLLEGLGYGLRNIMANHVVAITRKNTLNASALSSILEQTA FT MFETGDAVGAFERMHLLGLAYQGLNANNLLFDLVKENSKGTVGTVIASLVERAIEDRVI FT KVASEMKSGYKMIEPADWALWNAYAATGLLAATIVNVGAARAAQGVASTVLYYNDILEY FT ETGLPGVDFGRAMGTAVGFSFFSHSIYGGGGPGIFHGNHVVTRHSKGFALPCVAAAMCL FT DAGTQMFSVEKTSGLIGSVYSEIDYFREPIVNVAKGAAEIKDQL" FT CDS 1800..2285 FT /codon_start=1 FT /transl_table=11 FT /gene="mrtD" FT /product="methyl coenzyme M reductase II D protein" FT /db_xref="GOA:Q50485" FT /db_xref="InterPro:IPR003901" FT /db_xref="UniProtKB/Swiss-Prot:Q50485" FT /protein_id="AAA73437.1" FT /translation="MMSETGFIDVKIFPQRLLKPETAEKLLNRIYELEGIVRVLVHGHQ FT YPTVTTGPARGQRVNHSDRRKITVRGEEFELRVKVGEIIVGMLPETLEEKMETIEEILD FT EVLPCSYKVFIGAFTKKDITISDYLKYGLKFEEKIDPRVIGMVDPSSRMKDTVVNIK" FT CDS 2301..3101 FT /codon_start=1 FT /transl_table=11 FT /gene="mrtG" FT /product="methyl coenzyme M reductase II gamma subunit" FT /db_xref="GOA:P21112" FT /db_xref="HSSP:1HBN" FT /db_xref="InterPro:IPR003178" FT /db_xref="UniProtKB/Swiss-Prot:P21112" FT /protein_id="AAA73438.1" FT /translation="MSYKAQYTPGETQIAENRRKHMDPDYEFRKLREVSDEDLVKVLGH FT RNPGESYKSVHPPLDEMDFEEDIVRDMVEPIQGAKEGVRVRYIQFADSMYNAPAQPYDR FT ARTYMWRYRGVDTGTLSGRQVIEMRELVLEGVSKELVETELFDPATTGIRGATVHGHSL FT RLDENGLMFDALQRYVFDEEKGHVVYVKDQVGRPLDEPVDMGQPLGEDELKKITTIYRK FT DNIAMRDDDKEAIEVVENIHTGRTMGGFGMDVFKDDLRKRLGDD" FT CDS 3101..4774 FT /codon_start=1 FT /transl_table=11 FT /gene="mrtA" FT /product="methyl coenzyme M reductase II alpha subunit" FT /db_xref="GOA:P21110" FT /db_xref="HSSP:1E6V" FT /db_xref="InterPro:IPR015823" FT /db_xref="UniProtKB/Swiss-Prot:P21110" FT /protein_id="AAA73439.1" FT /translation="MDEKKHFLTALKKKFEVEDPDEKITNFYCFGGWEQSARKKEFTEY FT AKKAAEKRGGIPFYNPDIGVPLGQRKLMAYRVSGTDAYVEGDDLHFVNNAAIQQMVDDI FT KRTVIVGMDTAHAVLEKRLGVEVTPETINEYMEAINHALPGGAVVQEHMVEVHPGLVED FT CYAKVFTGDDNLADELDKRILIDINKEFPEEQAEQLKEQLKSYIGNRTYQVNRVPTIVV FT RTCDGGTVSRWSAMQIGMSFISAYKLCAGEAAIADFSYAAKHADVIEMGTIMPARRARG FT PNEPGGVAFGTFADIVQASRVSDDPAKISLEVIAGAAALYDQVWLGSYMSGGVGFTQYA FT TAAYTDDILDDFVYYGMEYVDDKYGICGTKPTMDVVRDISTEVTLYSLEQYEEYPTLLE FT DHFGGSQRAAVAAAAAGCSTAFATGNSNAGINGWYLSQILHKEAHSRLGFYGYDLQDQC FT GASNSLSIRSDEGLIHELRGPNYPNYAMNVGHQPEYAGIAQAPHAARGDAFCTNPLIKV FT AFADKDLSFDFTSPRKSIAAGALREFMPEGERDLIIPAGK" FT CDS complement(5336..>6630) FT /codon_start=2 FT /transl_table=11 FT /gene="pyrC" FT /product="dihydro-orotase" FT /db_xref="GOA:O27199" FT /db_xref="HSSP:1GKR" FT /db_xref="InterPro:IPR002195" FT /db_xref="UniProtKB/Swiss-Prot:O27199" FT /protein_id="AAA73440.1" FT /translation="SLDLSLENCRVDRDLTVNIGVDDGKIVQISRGRIDASEKIDLKAY FT FVLPGLIDAHVHFRDPGLEYKEDFRTGSMAAAHGGFSTVLDMPNTVPPADNAAEFERKI FT RIGERKSVVDFGLHAGFRSVSDVKGILRNMPASFKVFMDLTGISTVDGLFRELKDLSAP FT VPVTVHCENRDVVMKSMKELKDRSDPSAYALCKTSPRREVSVAEVLALSIHHEHPVHIC FT HLSTVKALQLVEPFREYVTSQVTPHHLLLDSGAFRRFGTMVKTNPPLRPPESRIYPEFL FT DRINIIGTDHAPHGIEEKRKGIWDAPPGIPNLEVVLKLLLTLVSKGRMSLSTIRRMLAE FT EPPRIFGLRSKGRIAEGMDADFTVIDLKETGRIRSDEFYSKAHYTPFEGFSYTGARHDH FT CQGQAVMRDGEVLEGNGRYIPAEHDGKHGSA" XX SQ Sequence 6630 BP; 1901 A; 1586 C; 1636 G; 1507 T; 0 other; aaataacccc cctccttttt tgttttcaga tgcaggattc cagttatcac agaccatgtt 60 attatcactg ttaatatttt tatgaaaaat gatttttcat atttaaaatt tttctttttt 120 tccttttgaa aacatttata ttatcctttt ttcttattca atagagtcat agatgtcaaa 180 aaactgaagc ataagcggtt atattcagat taatactgga taataacgag atgtacagta 240 tggcttgttc tataatgagc tgtgctctgg aggttggagg atgaacttcg gtataacctg 300 aaggtccatt tcgagacatt ggtgatggat acgtccttca tgaggtgacc atttccatgg 360 attatcgctg gcaatcccat aaccccatca gttttattaa taaaatagta aattttatta 420 ataaataaat aaaacaagag gtgtgaatac catgccaatg tatgaagaca gaatagatct 480 ctacggggca gatggtaagc tcctcgagga agatgttcct cttgaagccg taagccccct 540 taaaaacccg acaatagcaa acttggtaag cgacgtgaaa aggtcagttg cagtgaacct 600 ggccgggata gagggaagcc tcaagaaggc agccctgggt ggaaagtcca acttcatccc 660 gggaagggaa gttgaactgc caatagttga aaacgcagag gcaatagctg aaaaggtcaa 720 aagacttgtt cagacatctg aagacgacga cacaaacatc cgcctcataa acaacggcca 780 gcagatcctc gtacaggtcc caacaacaag gatgggcgtg gctgcagact acacagtctc 840 agccctggtc acaggagctg cagttgtaca ggcaataatc gacgaattcg acgtggacat 900 gttcgatgca aacgcagtca aaaccgctgt catgggaaga tacccacaga cagttgactt 960 cacaggagcc aacctctcaa cactcctcgg accaccagta ctcctcgaag gtcttggata 1020 cggtctcagg aacataatgg caaaccacgt cgtggccatc acaaggaaga acacactcaa 1080 cgcatccgca ctatcatcca tactcgaaca gacagcaatg ttcgaaacag gtgacgcagt 1140 cggagcattc gaaaggatgc acctgcttgg actcgcctac cagggactca acgccaacaa 1200 cctcctcttt gaccttgtta aggagaacag caagggaaca gtgggtacag tcatagcatc 1260 cctcgttgaa agggcaatag aggacagggt catcaaagtg gccagtgaaa tgaaatcagg 1320 ctacaagatg atcgaaccag ccgactgggc tctatggaac gcatacgcag caacaggtct 1380 ccttgcagca acaatagtca acgtgggagc agcaagggca gcccagggtg tggcatcaac 1440 agtgctctac tacaacgaca tactcgaata cgagacaggt ctgccaggtg tggacttcgg 1500 aagggcaatg ggtaccgcag taggattctc attcttcagc cactccatct acggtggagg 1560 tggaccaggt atattccatg gaaaccacgt cgttacaagg cacagtaaag gatttgctct 1620 accatgtgtg gccgcagcta tgtgccttga cgcagggaca cagatgttct cagtggagaa 1680 gacatcagga ctcataggat ctgtttacag cgaaatagac tacttcagag aaccaatagt 1740 taacgttgca aaaggtgctg cagagataaa ggaccagtta taggttaaaa tggggagtca 1800 tgatgtcaga aacaggattc atcgatgtta agatcttccc ccagcggctg ctgaaaccag 1860 agaccgctga gaagcttctt aacaggatat atgaacttga ggggatagtc agggtactgg 1920 tccatggaca tcaatacccg acagttacta caggccctgc aaggggacag agggtcaacc 1980 acagcgatcg gcggaagata acagtccgcg gagaggagtt tgaactccgg gtgaaggtcg 2040 gagagatcat tgtggggatg ctccctgaga ccctggagga gaagatggaa acaatcgagg 2100 aaatcctgga tgaagtgctc ccctgctcct ataaggtatt cataggtgcc ttcacaaaga 2160 aggacatcac catatcagat taccttaaat acggacttaa atttgaggaa aagattgatc 2220 caagggtaat cggcatggtt gatcccagtt caaggatgaa ggacaccgtt gttaacataa 2280 aataattgtg aggttatgaa atgtcttaca aagcccagta cactcctgga gaaacccaga 2340 tagctgaaaa cagaagaaaa cacatggacc ctgattacga attccgtaaa ttaagggaag 2400 tatcagatga ggaccttgtc aaggtcctgg ggcacaggaa ccccggtgag agctacaaat 2460 ccgtgcaccc accactcgat gagatggact tcgaggagga catagtgagg gacatggttg 2520 aacccatcca gggtgcaaag gaaggtgtca gggtaaggta catccagttc gcagactcca 2580 tgtacaacgc cccggcccag ccctacgaca gggcaaggac ctacatgtgg aggtaccgcg 2640 gtgtcgacac aggtacactc tcaggaagac aggtcatcga gatgagggaa ctggtcctcg 2700 agggcgtatc caaggaactc gtggaaaccg aactcttcga tcctgcaaca acaggtataa 2760 ggggtgcaac agtccacgga cactccctga ggctcgatga aaacggtctc atgttcgacg 2820 ccctccagag gtatgtcttc gatgaagaga aggggcacgt ggtatacgtt aaggaccagg 2880 tcggaaggcc cctcgatgaa cctgtggaca tgggtcagcc cctcggcgaa gatgaactaa 2940 aaaagatcac cacaatctac aggaaggaca atatcgccat gagggatgat gataaagagg 3000 caattgaagt tgttgagaac atacacaccg gccgtaccat gggcggtttt ggtatggacg 3060 tattcaagga tgacctaaga aaaaggctag gtgatgatta atggatgaaa agaaacattt 3120 ccttacagct ttaaagaaga agtttgaggt ggaagacccc gacgagaaaa tcacaaactt 3180 ctactgcttc ggcggatggg aacagtccgc acgtaaaaag gaattcacag agtacgccaa 3240 gaaggcagca gagaagaggg gaggaatacc cttctacaac cctgacatcg gtgtgccgct 3300 gggtcagagg aaactcatgg cctaccgtgt atcaggcaca gacgcctacg ttgagggtga 3360 cgacctccac ttcgtcaaca acgcagccat ccagcagatg gtggacgaca taaagaggac 3420 agtcatcgtg ggtatggaca cagcacacgc cgtccttgag aagaggctcg gtgtggaggt 3480 gacccctgag acaataaacg agtacatgga ggcaatcaac cacgccctcc ctggtggtgc 3540 cgttgtccag gagcacatgg tcgaggtaca ccctggactg gttgaggact gttacgccaa 3600 ggtcttcaca ggtgacgaca acctggcaga tgaactggac aagaggatac tcatagacat 3660 aaacaaggag ttccctgagg aacaggctga acagctcaag gaacagctca agagctacat 3720 cggtaacagg acctaccagg tcaacagggt cccgacaata gtcgtgagga cctgtgacgg 3780 tggtacagtc tcaagatggt ctgcaatgca gatcggtatg agcttcatat cagcatacaa 3840 actctgtgca ggtgaagcag caatcgctga cttctcatac gctgcaaaac acgccgacgt 3900 tatagagatg ggtacaataa tgcctgcaag gagggcaagg ggaccaaacg agcccggtgg 3960 agttgccttc ggaacattcg cagacatagt acaggcttca agggtttcag atgaccctgc 4020 gaagatatca cttgaggtca tcgcaggtgc agcagcactc tacgaccagg tctggctcgg 4080 ctcatacatg tcaggtggtg tgggtttcac ccagtacgca acagcagcct acaccgacga 4140 catcctcgac gacttcgtat actacggtat ggagtacgtt gatgacaagt acggaatctg 4200 cggaacaaaa cctacaatgg atgttgtgcg cgacatatcc acagaggtca cactgtactc 4260 acttgaacag tatgaggaat accccaccct cctggaggac cacttcggag gatcacagag 4320 ggcagctgtt gcagctgcag cagcaggatg ttccacagcc ttcgcaacag gaaactcaaa 4380 tgcaggtatc aacggatggt acctcagcca gatactccac aaggaggccc acagcaggct 4440 cggattctac ggatacgacc tgcaggacca gtgcggtgca tccaactccc tctcaatcag 4500 gagcgacgag ggtctcatac acgaactccg tggacctaac tatccaaact acgccatgaa 4560 cgtgggtcac cagccagagt acgcaggtat agctcaggca ccacacgctg caaggggcga 4620 tgccttctgt acaaacccac tcataaaggt tgcatttgca gataaggacc tctcctttga 4680 cttcacatca ccaaggaagt caattgcagc aggtgcactc agggagttca tgccagaggg 4740 agaaagggac ctcatcatac cagctggaaa ataattccag caaatatttt cttttttatg 4800 acttcaaaag gctgatagag ccagtttctc attttcaggt ttcaattcaa aaaaagaatt 4860 ttagagtcag tttatcattc attcagtctt ctgtttcaat gtagatcctg tgtttatcaa 4920 ggtctattct tgttagtttt ccagggaatt ccttctggga gtcaagtatg tctgttgccc 4980 tgatcccatc ttcaaggacc tcaatgaata taacgtcctc catgaggagg tctccacctt 5040 ctgagtagag gtttgattca cacatatgtt tcaccacgca ttacattgag ttcaagaata 5100 tgttcttatt caatataaat tttttcatta ttaatcatgt tctttttgcg gttagaatcc 5160 atcatcgtct ctcctgatag atggtattca gcacagcagg tgcttcgaac acagagttaa 5220 aggctaatca tagaagaggc aggaagtcca ttcgaacaca tggttaagag gaagcaggag 5280 acgaaagaaa gttgaataaa gtcgtgtttc tctaatcaag ataggtcaaa gtcacttcat 5340 gcactcccat gtttaccatc atgctctgca gggatgtacc tgccattacc ctcaagcacc 5400 tccccatctc tcatgacagc ctgcccctga caatggtcat gacgggctcc ggtgtaactg 5460 aaaccctcaa agggggtgta gtgggcctta ctgtagaatt catctgacct gatcctgcca 5520 gtctctttaa gatcgatgac ggtaaaatca gcgtccatgc cctcagctat acgtcccttg 5580 gacctcagac caaatatcct tggcggctcc tctgcaagca tcctccgtat ggtggaaagg 5640 gacatcctcc cctttgagac cagtgtaagt aacagtttaa gtacaacctc aaggttgggg 5700 atccctggtg gcgcgtccca gatacccttc ctcttttcct cgataccgtg gggtgcatga 5760 tcggttccaa tgatattgat cctatcaaga aactctggat aaatccggct ctcagggggc 5820 ctcagaggag gatttgtttt caccattgtc ccgaatcttc taaaggcccc tgaatcaagc 5880 agaaggtggt gtggtgtgac ctgagatgtc acgtactccc tgaagggttc aacaagctga 5940 agggccttca ctgtgctcag atgacagatg tgcacggggt gttcatggtg aatggatagt 6000 gccaggacct cggccacaga gacctctctg cgaggggagg tcttgcaaag ggcataggct 6060 gagggatcac ttctatcctt taattccttc atggatttca tgaccacatc cctgttctcg 6120 cagtgcacgg tgaccggcac cggcgctgat agatccttaa gctctctgaa tagcccatca 6180 actgtactga tccccgtgag atccatgaat accttgaagg aggctggcat gttcctgaga 6240 atacctttaa cgtctgaaac acttctgaaa ccagcgtgga gcccaaaatc aacaacactc 6300 tttctttcac ctatcctgat cttcctttca aattccgctg cgttatctgc tggggggacc 6360 gtgtttggca tgtcaaggac tgtggaaaaa cccccatggg cagctgccat tgaccctgtc 6420 ctgaagtcct ccttgtactc cagcccgggg tccctgaaat gcacgtgggc gtcgatcagt 6480 cctggcagga cgaaataggc cttcaggtca atcttctctg aagcatcaat ccttccacgg 6540 gatatctgca ctatcttccc atcatccaca cctatattca cggtgaggtc cctgtcaacc 6600 ctgcagtttt caagtgaaag atccaagctt 6630 // |
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