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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   U09273; SV 1; linear; genomic DNA; STD; PRO; 1993 BP.
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AC   U09273;
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DT   28-JUL-1994 (Rel. 40, Created)
DT   05-JAN-2007 (Rel. 90, Last updated, Version 7)
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DE   Shigella sonnei dihydrofolate reductase (dhfrIIIc) gene, complete cds, and
DE   flanking partial IS176 insertion sequences.
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KW   .
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OS   Shigella sonnei
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Shigella.
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RN   [1]
RP   1-1993
RX   PUBMED; 7695291.
RA   Barg N.L., Register S., Thomson C., Amyes S.;
RT   "Sequence identity with type VIII and association with IS176 of type IIIc
RT   dihydrofolate reductase from Shigella sonnei";
RL   Antimicrob. Agents Chemother. 39(1):112-116(1995).
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RN   [2]
RP   1-1993
RA   Barg N.;
RT   ;
RL   Submitted (29-APR-1994) to the EMBL/GenBank/DDBJ databases.
RL   Neil Barg, Internal Medicine, Div of Infect Dis, Vanderbilt University
RL   School of Medicine, St Thomas Hospital, PO Box 380, Nashville, TN 37202,
RL   USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..1993
FT                   /organism="Shigella sonnei"
FT                   /mol_type="genomic DNA"
FT                   /clone="pKS7001a"
FT                   /db_xref="taxon:624"
FT   repeat_region   <1..660
FT                   /mobile_element="insertion sequence:IS176"
FT                   /note="3' end of IS176"
FT   gene            704..1213
FT                   /gene="dhfrIIIc"
FT   CDS             704..1213
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="dhfrIIIc"
FT                   /product="dihydrofolate reductase"
FT                   /db_xref="GOA:P0ABQ8"
FT                   /db_xref="InterPro:IPR001796"
FT                   /db_xref="InterPro:IPR012259"
FT                   /db_xref="InterPro:IPR017925"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0ABQ8"
FT                   /protein_id="AAA79232.1"
FT                   /translation="MIELHAILAATANGCIGKDNALPWPPLKGDLARFKKLTMGKVVIM
FT                   GRKTYESLPVKLEGRTCIVMTRQALELPGVRDANGAIFVNNVSDAMRFAQEESVGDVAY
FT                   VIGGAEIFKRLALMITQIELTFVKRLYEGDTYVDLAEMVKDYEQNGMEEHDLHTYFTYR
FT                   KKELTE"
FT   repeat_region   1840..>1993
FT                   /mobile_element="insertion sequence:IS176"
FT                   /note="5' end of IS176"
XX
SQ   Sequence 1993 BP; 487 A; 524 C; 520 G; 462 T; 0 other;
     agatgctggc tgaacgcgga gtgaatgtcg atcactccac gatttaccgc tgggttcagc        60
     gttatgcgcc tgaaatggaa aaacggctgc gctggtactg gcgtaaccct tccgatcttt       120
     gcccgtggca catggatgaa acctacgtga aggtcaatgg ccgctgggcg tatctgtacc       180
     gggccgtcga cagccggggc cgcactgtcg atttttatct ctcctcccgt cgtaacagca       240
     aagctgcata ccggtttctg ggtaaaatcc tcaacaacgt gaagaagtgg cagatcccgc       300
     gattcatcaa cacggataaa gcgcccgcct atggtcgcgc gcttgctctg ctcaaacgcg       360
     aaggccggtg cccgtctgac gttgaacacc gacagattaa gtaccggaac aacgtgattg       420
     aatgcgatca tggcaaactg aaacggataa tcggcgccac gctgggattt aaatccatga       480
     agacggctta cgccaccatc aaaggtattg aggtgatgcg tgcactacgc aaaggccagg       540
     cctcagcatt ttattatggt gatcccctgg gcgaaatgcg cctggtaagc agagtttttg       600
     aaatgtaagg cctttgaata agacaaaagg ctgcctcatc gctaactttg caacagtgcc       660
     cgacgcaata atcaccaatt cctcttttga taggtaaaca acaatgatcg agcttcatgc       720
     cattttagct gccaccgcca atggttgcat tgggaaggac aacgcacttc cctggccacc       780
     actaaaaggc gatctggcca gattcaaaaa attgaccatg gggaaggtgg tcattatggg       840
     gcgcaagacc tatgagagct tgcccgtcaa attagaaggt cgcacctgca tcgttatgac       900
     gcgccaagcg ctggagcttc cgggtgttcg tgacgctaac ggcgctatct tcgtgaacaa       960
     cgtcagcgac gccatgcggt tcgctcaaga agagagcgtg ggcgatgtgg cctacgtcat      1020
     tggtggcgct gagatattca agcgacttgc cttgatgatc acgcagattg aattgacctt      1080
     tgttaagcga ctgtacgaag gcgacaccta cgttgatctg gccgaaatgg tcaaagacta      1140
     cgagcagaat ggcatggaag aacatgacct tcacacttac ttcacttacc gtaaaaagga      1200
     gcttacagaa tgaccttcgt tgccatttca gatacgcacc tgcacaactg gtcgcagttc      1260
     gcgataccaa cagagtcggg cattaactcc aggctgttgc agattcttaa agccattgaa      1320
     gaagcggctt gcgccgccga ttaccacgcc ccagcgggcg tggttccaac cgtctatcac      1380
     ggcggcgatc tcttccatgt gcgaggttct ttgacccctt ctgtgctaaa cgcggtgctc      1440
     gactttttta agaccatcca ccgtgactac ggcgttccgt ttcgcatgat cgccggcaat      1500
     cacgatctgg aaaccaaaga ctcatgtcct atgggcaatg cagctgcggc gcttaattcg      1560
     ttgccgtttg tggaggttgt atccgaaaaa acgctgttcg aggaccacaa agtcgctctg      1620
     ctgccatggc gcgattccat ggacgatctg cgtgcggatc ttgcgcacgt taaagacgcg      1680
     atcggcgcta gtgttgcctc taagtggaca gcaatcatcc acgcaccggt taacggggtt      1740
     gttcttggca ttccagacca tgggttcgac ggaaaagagc tcgcctccta tggcttcggg      1800
     ttagtgctcg ccggtcacta ccacaaccac aaaaaaatcg gcactgttgc aaatagtcgg      1860
     tggtgataaa cttatcatcc ccttttgctg atggagctgc acatgaaccc attcaaaggc      1920
     cggcattttc agcgtgacat cattctgtgg gccgtacgct ggtactgcaa atacggcatc      1980
     agttaccgtg agc                                                         1993
//
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