EBI Dbfetch

ID   U06424; SV 1; linear; genomic DNA; STD; PRO; 1950 BP.
XX
AC   U06424;
XX
DT   08-MAR-1994 (Rel. 38, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 7)
XX
DE   Xanthomonas oryzae pv. oryzae JW89011 very short patch  repair endonuclease
DE   homolog (vsr) gene and XorII methyltransferase (xorII) gene, complete cds.
XX
KW   .
XX
OS   Xanthomonas oryzae
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xanthomonas.
XX
RN   [1]
RP   1-1950
RX   DOI; 10.1007/BF00286690
RX   PUBMED; 8078464.
RA   Choi S., Leach J.E.;
RT   "Identification of the XorII methyltransferase gene and a vsr homolog from
RT   Xanthomonas oryzae pv. oryzae";
RL   Mol. Gen. Genet. 244(4):383-390(1994).
XX
RN   [2]
RP   1-1950
RA   Leach J.E.;
RT   ;
RL   Submitted (08-FEB-1994) to the EMBL/GenBank/DDBJ databases.
RL   Jan E. Leach, Plant Pathology, Kansas State University, Throckmorton Hall,
RL   Manhattan, KS 66506-5502, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1950
FT                   /organism="Xanthomonas oryzae"
FT                   /strain="pv. oryzae; JW89011"
FT                   /mol_type="genomic DNA"
FT                   /clone="pE7.0"
FT                   /db_xref="taxon:347"
FT   RBS             57..61
FT                   /gene="vsr"
FT   CDS             71..481
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="vsr"
FT                   /note="very short patch repair endonuclease homolog,
FT                   function presumed by similarity to vsr-dcm of E. coli,
FT                   Swiss-Prot Accession Number P09184"
FT                   /db_xref="GOA:Q56829"
FT                   /db_xref="HSSP:1VSR"
FT                   /db_xref="InterPro:IPR004603"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q56829"
FT                   /protein_id="AAA50431.1"
FT                   /translation="MTDRLSPERRRYLMQQVRSKNTRPEKAVRSLLHSIAYRFRLHRKD
FT                   LPGTPDIVFPSRRLVLFVHGCFWHGHGCRIGQLPKSRLDYWSPKIEANRARDQRKEAAL
FT                   AAEGWRVAVVWQCELSDLGALEARLRNILDPS"
FT   -35_signal      488..491
FT                   /gene="xorII"
FT   -10_signal      511..516
FT                   /gene="xorII"
FT   RBS             539..543
FT                   /gene="xorII"
FT   CDS             553..1827
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xorII"
FT                   /product="M-XorII"
FT                   /function="XorII methyltransferase"
FT                   /db_xref="GOA:P52311"
FT                   /db_xref="HSSP:1DCT"
FT                   /db_xref="InterPro:IPR018117"
FT                   /db_xref="UniProtKB/Swiss-Prot:P52311"
FT                   /protein_id="AAA50432.1"
FT                   /translation="MTRPIGIDLFAGAGGLSLGFEQAGFDLVAAVDIDPIHCAAHKFNF
FT                   PKCATVCKSVVDVTRSELRRIAGIGKRDIDIVIGGAPCQGFSLIGKRALDDSRNQLVHH
FT                   YVRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVVTDYRVLNAADYGVP
FT                   QDRRRLILMGARKGLPLPAYPEPTGRTTVGDAIGDIPDAESFPELWERDWVKAKYGKPS
FT                   TYAAYLRGKKDDPTDFGYRRQFDPMLLTGSLLTDHTELSRQRFAAIAPDDVEPVSRFKK
FT                   LALNGICNTLRAGTASDRGAFTSPRPIHPTVPRVITVREAARLHSYPDWFRFHATKWHG
FT                   FRQIGNSVPPLLARAVGGQIMKALRKKPEKPSEMLALGDQSLIGISMTDAAAMFGVSST
FT                   VIARRSRPVDRPAPRRHEERELVTA"
XX
SQ   Sequence 1950 BP; 436 A; 572 C; 544 G; 398 T; 0 other;
     ccccctctgc ccgcttccaa cgggcggaaa gcgcacaaac cttcatcaat acagacacgc        60
     aaccagggcc atgactgacc gattgtcccc cgagcgtcgt cgctatctga tgcagcaggt       120
     aagaagtaag aacacgcggc ccgagaaggc ggtgcgctct ctactgcata gcattgcgta       180
     ccgcttccga ctgcaccgca aagacttgcc tggaactccc gatatcgtgt ttccgagccg       240
     gcgcttagtg ttgttcgtgc atggctgctt ctggcacggt catgggtgtc ggatcggaca       300
     actaccgaaa tcgcgcctcg actactggag tccgaagatc gaggccaatc gagctcgcga       360
     tcagcgaaag gaagccgctt tggccgcaga aggctggcgc gttgccgttg tgtggcagtg       420
     cgagctgagc gatctcggcg ctttggaggc acggcttagg aacatccttg acccgagcta       480
     aaaacgatcg acaaagcgat cgtttctttg tatgatccca gtgcactcaa cgaacgacaa       540
     ggacattcag ctatgacacg ccccatcggg atcgacctgt tcgctggggc cggggggctc       600
     agcctcggtt tcgagcaagc tggattcgac ctcgtcgcag cggtggatat cgacccaatc       660
     cactgcgctg cgcacaagtt caacttcccc aagtgcgcca ctgtctgcaa gagcgttgtc       720
     gatgtaacgc ggagcgaact gcgtcgcatc gccggcatcg gaaagcgcga tatcgacatc       780
     gtgattggtg gtgcgccctg tcaaggcttc tctctcatcg ggaagcgcgc gctcgacgac       840
     tcgcgcaatc agctcgtgca tcactatgtg cgcgtggtga tggaattgaa gcccaaatac       900
     tttgtgttcg agaacgtcaa gggcctcacc gtcggtaagc atcgccagtt tctaaaggag       960
     gttatcgagg cctttcagaa tggtggctac gatgtagtaa cggattacag agtgctcaac      1020
     gcagccgact atggagtgcc gcaagataga cgccgtttga tcctcatggg cgctcgcaaa      1080
     ggtcttcctc ttccggccta cccggagcct actggacgca cgaccgtagg cgatgctata      1140
     ggcgacatac ccgatgcgga gagcttccct gagctatggg agcgcgactg ggtgaaggcg      1200
     aaatacggta agccatcaac gtatgcggct tatcttcgtg gcaagaaaga cgatccgacc      1260
     gacttcggct atcgccgaca attcgacccc atgctactca ctggctcatt gttgacagac      1320
     cacaccgagt tatcgcgtca acgctttgct gccatagctc ccgacgatgt ggagcctgtc      1380
     agtcggttca agaaactggc tctaaacggc atctgcaaca cactacgcgc aggtactgcg      1440
     agcgatcgag gtgcattcac gtcgcctcgc ccaattcatc cgacggttcc gcgcgtcatc      1500
     actgttcgtg aagctgctcg cctgcactcc tatccggatt ggttccgatt ccatgcgacc      1560
     aagtggcacg ggttccgcca gatcggcaac agcgtccctc cgctgctagc tcgtgccgtc      1620
     ggaggacaga tcatgaaagc tctgcgcaaa aagccagaaa agccgtccga gatgttggcg      1680
     cttggagacc agagcctgat tggcatttct atgaccgatg ccgcagcgat gtttggcgtt      1740
     tctagcacgg tcattgcacg acgtagccgc cctgttgatc ggcccgcacc tcgacgtcac      1800
     gaagaaagag agctggtaac agcatgaacg acaccaccaa ggcaccgagc cgctatcacc      1860
     agcttatcga gaaaattttc ttcgacgggt actccgaggg cataaccgaa attccgttcg      1920
     agcgcaaagc actcaaggaa gctgcccagg                                       1950
//