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EBI DbfetchID U01037; SV 1; linear; genomic DNA; STD; PRO; 3141 BP. XX AC U01037; XX DT 20-NOV-1993 (Rel. 37, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Fibrobacter succinogenes endo-1,4-beta-xylanase precursor (xynC) gene, DE complete cds and DNA gyrase subunit A (gyrA) gene, partial cds. XX KW . XX OS Fibrobacter succinogenes OC Bacteria; Fibrobacteres; Fibrobacterales; Fibrobacteraceae; Fibrobacter. XX RN [1] RX PUBMED; 8244936. RA Paradis F.W., Zhu H., Krell P.J., Phillips J.P., Forsberg C.W.; RT "The xynC gene from Fibrobacter succinogenes S85 codes for a xylanase with RT two similar catalytic domains"; RL J. Bacteriol. 175(23):7666-7672(1993). XX RN [2] RP 1-3141 RA Paradis F.W.; RT ; RL Submitted (24-AUG-1993) to the EMBL/GenBank/DDBJ databases. RL Francois W. Paradis, Dept. of Microbiology, U. of Guelph, Guelph, ON, N1G RL 2W1, Canada XX CC NCBI gi: 402870 XX FH Key Location/Qualifiers FH FT source 1..3141 FT /organism="Fibrobacter succinogenes" FT /strain="S85" FT /mol_type="genomic DNA" FT /clone_lib="pBR322" FT /clone="x14" FT /db_xref="taxon:833" FT CDS <1..588 FT /codon_start=1 FT /transl_table=11 FT /gene="gyrA" FT /product="DNA gyrase subunit A" FT /EC_number="5.99.1.3" FT /note="carboxy end; NCBI gi: 402872" FT /db_xref="GOA:P35810" FT /db_xref="InterPro:IPR006691" FT /db_xref="UniProtKB/Swiss-Prot:P35810" FT /protein_id="AAA21849.1" FT /translation="DLLMIATKNGQAVTFPISCFRAMGRGTHGVKGITLAEGDEVISLL FT WLKAGNKILTITEKGYGKRSEPGSYRVTRRGSKGVRNLNVTDKIGAAVFVESVADDYDL FT IITSKDGQVIRIKAADIRLTGRNAQGVKAITLRDGDVVKDATALPSVEDIEQDSADAKE FT TFDKVKGVEVDDDSVVKDDAEKQEIGPTETEE" FT attenuator 634..664 FT -35_signal 775..780 FT -10_signal 805..810 FT RBS 833..838 FT CDS 845..2671 FT /codon_start=1 FT /transl_table=11 FT /gene="xynC" FT /standard_name="XynC" FT /product="endo-1,4-beta-xylanase precursor" FT /function="hydrolase" FT /EC_number="3.2.1.8" FT /note="NCBI gi: 402871" FT /db_xref="GOA:P35811" FT /db_xref="HSSP:1XYN" FT /db_xref="InterPro:IPR018208" FT /db_xref="UniProtKB/Swiss-Prot:P35811" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA21848.1" FT /translation="MKTFSVTKSSVVFAMALGMASTAFAQDFCSNAQHSGQKVTITSNQ FT TGKIGDIGYELWDENGHGGSATFYSDGSMDCNITGAKDYLCRAGLSLGSNKTYKELGGD FT MIAEFKLVKSGAQNVGYSYIGIYGWMEGVSGTPSQLVEYYVIDNTLANDMPGSWIGNER FT KGTITVDGGTYIVYRNTRTGPAIKNSGNVTFYQYFSVRTSPRDCGTINISEHMRQWEKM FT GLTMGKLYEAKVLGEAGNVNGEVRGGHMDFPHAKVYVKNGSDPVSSSSVKSSSSTDAPK FT SSSSKGNGNVSGKIDACKDVMGHEGKETRTQGQNNSSVTGNVGSSPYHYEIWYQGGNNS FT MTFYDNGTYKASWNGTNDFLARVGFKYDEKHTYEELGPIDAYYKWSKQGSAGGYNYIGI FT YGWTVDPLVEYYIVDDWFNKPGANLLGQRKGEFTVDGDTYEIWQNTRVQQPSIKGTQTF FT PQYFSVRKSARSCGHIDITAHMKKWEELGMKMGKMYEAKVLVEAGGGSGSFDVTYFKMT FT DKAHPLAQPEPESSSSEAKVESSSSTVALHAAPKMELKSGNFQVFDMQGRFLGTVKLDA FT GASVAQVLKANFKNAGIYMVKQGNFMQRVAVK" FT sig_peptide 845..919 FT mat_peptide 920..2668 FT /gene="xynC" FT /standard_name="XynC" FT /product="endo-1,4-beta-xylanase" FT /function="cleaves internal linkages of beta-1,4-xylan FT /polymers" FT /EC_number="3.2.1.8" FT /experiment="experimental evidence, no additional details FT recorded" FT terminator 2755..2781 XX SQ Sequence 3141 BP; 775 A; 744 C; 826 G; 796 T; 0 other; gatcttttga tgattgcaac caagaacggt caggccgtca cgttcccgat tagctgcttc 60 cgcgctatgg gtcgtggcac gcacggcgtg aagggcatta cgctcgccga aggcgacgaa 120 gtcatttcgc tcttgtggct caaggccggc aacaagatct tgaccatcac cgaaaagggt 180 tatggcaagc gttctgaacc gggttcttac cgtgtgaccc gccgtggtag caagggtgtc 240 cgcaacttga acgttacaga caagatcggt gccgccgtgt tcgttgaaag cgttgctgac 300 gattacgatt tgatcatcac aagtaaggac ggtcaggtca tccgcatcaa ggctgccgat 360 atccgcctca cgggccgcaa tgcccagggc gtcaaggcaa tcacgctgcg cgatggcgat 420 gtcgtgaagg atgcaactgc actcccgagc gtcgaagata tcgaacaaga tagcgccgat 480 gccaaggaaa ctttcgacaa ggttaagggc gttgaagtcg atgacgattc cgttgtcaag 540 gacgatgctg aaaagcagga aatcggcccg acggaaaccg aagaataatc gtgaaccttg 600 cgaagtggaa cgatagttcc caaaagtcgt tttagcctct tcctggagtt cccgggaaga 660 ggctttttta tgctttgctg ttggcggata atcgagcggt tgccttcaaa ggaggcgagc 720 ggtcttataa tgtaaaaata ttgtcgttgt tttttacaac aacaaacatt tgtttaatgt 780 cggtcttttt tcatctgtca ctcatatatt atgttcagca taactaaaat gtgaggagta 840 tcatatgaaa acatttagtg tgaccaagtc tagcgttgtt ttcgcaatgg ctttgggtat 900 ggcttcgaca gcttttgctc aggatttctg cagcaatgcg caacattccg gccaaaaggt 960 aacgattact tcgaaccaaa ctggtaaaat cggcgatatc ggttacgaac tttgggatga 1020 aaacggccat ggtggtagcg ctacattcta tagtgacggt tccatggact gcaatatcac 1080 tggtgctaag gactatctct gccgtgcggg cctttccctt ggcagtaaca agacctacaa 1140 ggaacttggt ggtgatatga ttgccgagtt caagcttgtg aagagcggtg cccagaatgt 1200 gggttactct tatatcggta tctatggctg gatggaaggt gtttctggaa cgcctagcca 1260 gttggtcgaa tactacgtga ttgataacac cctcgccaat gacatgccgg gtagctggat 1320 tggtaacgaa agaaagggta ccattacggt tgacggcggt acctatatcg tttatcgcaa 1380 tacccgtacc ggtccggcta ttaagaacag cggtaacgtc acgttctatc agtatttcag 1440 cgtgcgtacc tctccgcgcg attgcggtac catcaatatt tctgaacaca tgagacagtg 1500 ggaaaagatg ggcctcacca tgggtaagct ttacgaagcc aaggtgcttg gcgaagctgg 1560 taacgtgaat ggcgaagttc gcggcggtca tatggacttc ccgcatgcca aggtctatgt 1620 gaaaaacggc tctgatccgg tttcttcctc ttctgtgaag tctagctctt ctacggatgc 1680 accgaaatcc agttcctcta agggtaacgg caacgtttct ggtaaaattg acgcctgcaa 1740 ggacgttatg ggccatgaag gcaaagaaac gagaactcag ggtcagaaca actctagcgt 1800 gacgggtaac gtcggcagct ctccgtacca ctatgaaatt tggtatcagg gtggtaacaa 1860 ctccatgacg ttctacgaca acggtactta taaggcaagc tggaatggta ccaacgactt 1920 ccttgctcgt gtcggtttca agtatgatga aaagcacact tacgaagaac ttggccctat 1980 cgatgcctac tacaagtgga gcaagcaggg tagtgctggt ggctacaact acatcggtat 2040 ctatggctgg acggtggatc cgctcgtaga atactacatt gttgatgact ggttcaataa 2100 gccgggtgca aacctcctcg gccagagaaa gggtgaattt acggttgatg gtgacaccta 2160 cgaaatctgg cagaataccc gtgtccagca gccctccatt aagggtacgc agaccttccc 2220 gcaatacttc agcgttcgta agagtgctcg ttcttgcggc catatcgaca tcactgccca 2280 tatgaagaag tgggaagaac tcggcatgaa gatggggaag atgtacgaag ccaaggtgct 2340 cgtggaagcc ggtggtggct cgggttcctt cgatgtcacc tacttcaaga tgacggataa 2400 ggctcatccg cttgctcagc cggaaccgga atccagctct tccgaagcaa aggtagaatc 2460 ttctagctcc acggttgccc tccatgcagc tccgaagatg gaactcaaga gcggcaactt 2520 ccaggtgttc gacatgcagg gccgtttcct cggcactgtg aagctcgacg ctggcgcctc 2580 tgtcgcccag gttctgaagg ctaacttcaa gaacgctggc atctacatgg tgaagcaggg 2640 caactttatg cagcgcgtcg ccgtgaagta ataagtctct cttcctaaag actgtaaaaa 2700 cgctccccgt cgggtttgca tattgtgcaa tgctgcgcat cttacgcaaa aaaaacgcga 2760 gtcccgcaac ggaactcgcg taaatacttt gtctaaagtc gaagattact tcttagattt 2820 ccgtgagcaa aaaggccccg tattaacggg tcgtgattgc tttcagcgtc cgcggcttta 2880 ctcggtcatg aaattatgca agcataattt cgcgacgctc gttttgcacg cttttgcgag 2940 agaagcgctc tgaatgattt acttcttagc tttagcgctt gcggtctttt tcgggggatg 3000 tgccgaaatc ttcttcacgc tcttgtcttc ttccttagca gccttttctg cttccttgaa 3060 catggcttcg acctgttcga gagcgccgtt cggatgttgt tcgatgattt cagaagcttc 3120 gtccacgagt tcagcgaatt c 3141 // |
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