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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   S83275; SV 1; linear; mRNA; STD; HUM; 390 BP.
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AC   S83275;
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DT   13-MAR-1997 (Rel. 51, Created)
DT   19-DEC-2002 (Rel. 74, Last updated, Version 6)
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DE   Homo sapiens beta 1,4 N-acetylgalactosaminyltransferase/betal,4
DE   GalNAcT/Sda-GalNAcT mRNA, partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 179846] from the original journal article.
RP   1-390
RX   DOI; 10.1002/(SICI)1097-0215(19960904)67:5<626::AID-IJC6>3.0.CO;2-W
RX   PUBMED; 8782649.
RA   Dohi T., Yuyama Y., Natori Y., Smith P.L., Lowe J.B., Oshima M.;
RT   "Detection of N-acetylgalactosaminyltransferase mRNA which determines
RT   expression of Sda blood group carbohydrate structure in human
RT   gastrointestinal mucosa and cancer";
RL   Int. J. Cancer 67(5):626-631(1996).
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DR   H-InvDB; HIT000217198.
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FH   Key             Location/Qualifiers
FH
FT   source          1..390
FT                   /organism="Homo sapiens"
FT                   /mol_type="mRNA"
FT                   /tissue_type="gastric mucosa"
FT                   /db_xref="taxon:9606"
FT   CDS             <1..>390
FT                   /codon_start=1
FT                   /product="beta 1,4
FT                   N-acetylgalactosaminyltransferase/betal,4
FT                   GalNAcT/Sda-GalNAcT"
FT                   /db_xref="GOA:Q8IVI2"
FT                   /db_xref="HGNC:24136"
FT                   /db_xref="InterPro:IPR001173"
FT                   /db_xref="UniProtKB/TrEMBL:Q8IVI2"
FT                   /protein_id="AAN86706.1"
FT                   /translation="SVAKFPVTIRHPVIPKLYDPGPERKLRNLVTIATKTFLRPHKLMI
FT                   MLRSIREYYPDLTVIVADDSQKPLEIKDNHVEYYTMPFGKGWFAGRNLAISQVTTKYVL
FT                   WVDDDFLFNEETKIEVLVDVLEKTEL"
XX
SQ   Sequence 390 BP; 103 A; 102 C; 95 G; 90 T; 0 other;
     tcagtggcca agtttccagt gaccatccgc catcctgtca tacccaagct atacgaccct        60
     ggaccagaga ggaagctcag aaacctggtt accattgcta ccaagacttt cctccgcccc       120
     cacaagctca tgatcatgct ccggagtatt cgagagtatt acccagactt gaccgtaata       180
     gtggctgatg acagccagaa gcccctggaa attaaagaca accacgtgga gtattacact       240
     atgccctttg ggaagggttg gtttgctggt aggaacctgg ccatatctca ggtcaccacc       300
     aaatacgttc tctgggtgga cgatgatttt ctcttcaacg aggagaccaa gattgaggtg       360
     ctggtggatg tcctggagaa aaccgaactg                                        390
//
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