spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   S78423; SV 1; linear; mRNA; STD; FUN; 1497 BP.
XX
AC   S78423;
XX
DT   27-SEP-1995 (Rel. 45, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   chit42=endochitinase [Trichoderma harzianum, mRNA, 1497 nt].
XX
KW   .
XX
OS   Hypocrea lixii
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC   Hypocreomycetidae; Hypocreales; Hypocreaceae; Hypocrea.
XX
RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 167852] from the original journal article.
RP   1-1497
RX   DOI; 10.1007/BF00326583
RX   PUBMED; 7750151.
RA   Garcia I., Lora J.M., de la Cruz J., Benitez T., Llobell A.,
RA   Pintor-Toro J.A.;
RT   "Cloning and characterization of a chitinase (chit42) cDNA from the
RT   mycoparasitic fungus Trichoderma harzianum";
RL   Curr. Genet. 27(1):83-89(1994).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1497
FT                   /organism="Hypocrea lixii"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:5544"
FT   gene            1..1497
FT                   /gene="chit42"
FT                   /note="endochitinase, CHIT42"
FT   CDS             49..1320
FT                   /codon_start=1
FT                   /gene="chit42"
FT                   /product="endochitinase"
FT                   /note="Method: conceptual translation with partial peptide
FT                   sequencing; CHIT42"
FT                   /db_xref="GOA:P48827"
FT                   /db_xref="InterPro:IPR001223"
FT                   /db_xref="InterPro:IPR001579"
FT                   /db_xref="InterPro:IPR011583"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/Swiss-Prot:P48827"
FT                   /protein_id="AAB34355.1"
FT                   /translation="MLSFLGKSVALLAALQATLSSPKPGHRRASVEKRANGYANSVYFT
FT                   NWGIYDRNFQPADLVASDVTHVIYSFMNLQADGTVISGDTYADYEKHYADDSWNDVGTN
FT                   AYGCVKQLFKVKKANRGLKVLLSIGGWTWSTNFPSAASTDANRKNFAKTAITFMKDWGF
FT                   DGIDIDWEYPADATQASNMILLLKEVRSQRDAYAAQYAPGYHFLLTIAAPAGKDNYSKL
FT                   RLADLGQVLDYINLMAYDYAGSFSPLTGHDANLFNNPSNPNATPFNTDSAVKDYINGGV
FT                   PANKIVLGMPIYGRSFQNTAGIGQTYNGVGSGSWEAGIWDYKALPKAGATVQYDSVAKG
FT                   YYSYNSATKELISFDTPDMINTKVAYLKSLGLGGSMFWEASADKKGADSVIGTSHRALG
FT                   GLDTTQNLLSYPNSKYDNIKNGLN"
XX
SQ   Sequence 1497 BP; 390 A; 424 C; 343 G; 340 T; 0 other;
     cgttgctgtc gagcttgaac aatctaccaa catcacaagc aattcaccat gttgagcttc        60
     ctcggaaaat ccgtagcctt gctggctgcg ctgcaggcta ctctcagctc tccgaagcct       120
     ggccacagaa gagcgtctgt tgagaagaga gccaacggat acgcaaactc cgtctatttc       180
     accaactggg gcatctacga ccgcaacttc cagcctgccg atttggtggc atcagatgtc       240
     actcatgtca tctactcctt catgaacctc caggcagacg gcacagttat ctctggcgat       300
     acctacgctg attacgagaa gcactatgcc gatgattctt ggaatgatgt cggcaccaat       360
     gcctacggct gtgtcaagca gctgttcaag gtcaagaagg ccaaccgagg cctcaaggtt       420
     ctgctctcca tcggtggctg gacttggtcc accaacttcc cttctgcagc aagcacggat       480
     gccaaccgaa agaactttgc gaaaactgcc attaccttta tgaaggattg gggtttcgat       540
     ggtattgata tcgactggga gtaccctgca gacgccaccc aggcctccaa catgattctt       600
     ctgctgaagg aagtccgatc tcagcgtgat gcttatgctg cccagtatgc ccctggctac       660
     cacttcctcc tcaccattgc cgccccagct ggcaaggaca actactccaa gctgcgcctg       720
     gctgatcttg gccaagtcct cgactacatc aacctcatgg cctacgacta cgccggatcc       780
     ttcagccccc tcaccggtca cgacgccaac ctgtttaaca acccgtccaa ccccaatgcc       840
     acccccttca acaccgattc cgctgtcaag gattatatca atggaggtgt tcccgccaac       900
     aagattgttc tcggcatgcc catctacgga agatcattcc agaacaccgc tggtattggc       960
     cagacttaca atggtgttgg aagtggaagc tgggaggccg gtatctggga ttacaaggct      1020
     cttcccaagg ctggcgccac cgtccagtac gattctgtcg caaagggcta ctacagctac      1080
     aactccgcca ccaaggagct catctctttc gatacccccg acatgatcaa caccaaggtt      1140
     gcctatctca agtctctcgg cctgggaggt agcatgttct gggaggcctc agccgacaag      1200
     aagggagctg actctgtgat tggaacaagc cacagagctc ttggaggcct ggacacaact      1260
     caaaacctgc tgagctaccc caactccaag tatgataaca tcaagaatgg tctgaactag      1320
     gctgcctgtt ttgaggcgcc ttatggacat tgaagtcgtc gcggggaaat cgtcttggag      1380
     gagcagggtc atgaagtaaa tatttgttta aatacctgta catagccaca ttagcatata      1440
     gatgcatgaa tagtatctga gtttattata aaaaaaaaaa aaaaaaaaaa aaaaaaa         1497
//
spacer
spacer