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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   S75695; SV 1; linear; genomic DNA; STD; PRO; 1380 BP.
XX
AC   S75695;
XX
DT   29-JUL-1995 (Rel. 44, Created)
DT   01-SEP-2004 (Rel. 81, Last updated, Version 4)
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DE   idsA=bifunctional short chain isoprenyl diphosphate synthase
DE   [Methanobacterium thermoautotrophicum, Marburg, Genomic, 1380 nt].
XX
KW   .
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OS   Methanothermobacter thermautotrophicus
OC   Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
OC   Methanobacteriaceae; Methanothermobacter.
XX
RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 161161] from the original journal article.
RP   1-1380
RX   DOI; 10.1006/abbi.1994.1459
RX   PUBMED; 7979381.
RA   Chen A., Poulter C.D.;
RT   "Isolation and characterization of idsA: the gene for the short chain
RT   isoprenyl diphosphate synthase from Methanobacterium thermoautotrophicum";
RL   Arch. Biochem. Biophys. 314(2):399-404(1994).
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FH   Key             Location/Qualifiers
FH
FT   source          1..1380
FT                   /organism="Methanothermobacter thermautotrophicus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:145262"
FT   gene            206..1183
FT                   /gene="idsA"
FT                   /note="bifunctional short chain isoprenyl diphosphate
FT                   synthase, IDSase, FPP/GGPPSase"
FT   CDS             206..1183
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="idsA"
FT                   /product="bifunctional short chain isoprenyl diphosphate
FT                   synthase"
FT                   /note="farnesyl diphosphate and geranylgeranyl diphosphate
FT                   synthase; Method: conceptual translation with partial
FT                   peptide sequencing; IDSase; FPP/GGPPSase"
FT                   /db_xref="GOA:Q53479"
FT                   /db_xref="InterPro:IPR000092"
FT                   /db_xref="InterPro:IPR008949"
FT                   /db_xref="InterPro:IPR017446"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q53479"
FT                   /protein_id="AAB32421.1"
FT                   /translation="MTEVLDILRKYSEVADKRIMECISDITPDTLLKASEHLITAGGKK
FT                   IRPSLALLSCEAVGGNPEDAAGVAAAIELIHTFSLIHDDIMDDDEMRRGEPSVHVIWGE
FT                   PMAILAGDVLFSKAFEAVIRNGDSERVKDALAVVVDSCVKICEGQALDMGFEERLDVTE
FT                   DEYMEMIYKKTAALIAAATKAGAIMGGASEREVEALEDYGKFIGLAFQIHDDYLDVVSD
FT                   EESLGKPVGSDIAEGKMTLMVVKALEEASEEDRERLISILGSGDEGSVAEAIEIFERYG
FT                   ATQYAHEVALDYVRMAKERLEILEDSDARDALMRIADFVLEREH"
XX
SQ   Sequence 1380 BP; 385 A; 303 C; 421 G; 271 T; 0 other;
     atgcacacgt atcagggcat gcaggtaggg aggaccacag ggacttcata aggatgctca        60
     accccatgca cataatacca gcccacggag acctcagcat gctctcggcc tacgccgaga       120
     tagcagagga ggagggctac aagctgggta acgacataca catcttgagg aatggacagg       180
     cacaggtatt taatggaggt atccgatgac ggaagtatta gatattctca gaaagtactc       240
     tgaagtggcc gataagagga taatggagtg catcagcgac ataacacctg atacgctcct       300
     taaggcatca gaacacctca taacagcagg tggtaagaag ataagacctt cacttgcact       360
     ccttagctgt gaggctgtag gcggaaaccc tgaggacgct gcaggggtgg ctgcggccat       420
     agaactgata cacacattct cactcattca cgatgatata atggatgatg atgagatgag       480
     gcgaggggaa ccctcagtcc atgtcatatg gggtgaaccc atggccatac ttgcagggga       540
     cgtcctcttc tccaaggcct tcgaggccgt catcaggaac ggggactcag aaagggtgaa       600
     ggatgccctt gcagtggtgg ttgattcatg cgttaagata tgtgagggcc aggcccttga       660
     catgggcttt gaggagaggc tggatgtcac agaggatgag tacatggaga tgatctacaa       720
     gaagaccgca gccctcattg cagcagcaac aaaggcaggt gccataatgg ggggcgcatc       780
     agagagagag gttgaggccc tggaggacta cggcaaattc atcggcctcg cattccagat       840
     acacgacgac tacctggatg tggtgagtga tgaggaatct ctgggcaaac ctgtgggcag       900
     tgacatagca gagggcaaga tgaccctcat ggttgtaaag gcccttgagg aggcatcaga       960
     ggaggacagg gagaggctca tatcgatcct cggatcaggt gatgagggca gtgtcgctga      1020
     ggccatagag atctttgaac gctacggtgc aacccagtat gcccatgagg tggcccttga      1080
     ctatgtgagg atggccaagg agcgccttga gatacttgaa gactcagatg caagggacgc      1140
     actcatgagg atagctgact ttgtacttga aagggaacac taggtgatga tggtggagga      1200
     cctcgtctac cgctacgcac tcatgaatgc tgttaagcat aagggaaagg caaacccggg      1260
     cgccgtcatg ggggccgtta tgagcaatga acctgaactc agaaagaggg cccctgaggt      1320
     caaggaggct gttcaggctg ctgttgagaa ggttaacagt ttaaaacccg aagaacagca      1380
//
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