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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   S66038; SV 1; linear; mRNA; STD; PLN; 1106 BP.
XX
AC   S66038;
XX
DT   06-DEC-1993 (Rel. 38, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Beta vulgaris acidic class III chitinase SE2 mRNA, complete cds.
XX
KW   .
XX
OS   Beta vulgaris
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   Caryophyllales; Amaranthaceae; Beta.
XX
RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 138412] from the original journal article. This sequence comes from
RC   Fig. 5.
RP   1-1106
RX   PUBMED; 8400378.
RA   Nielsen K.K., Mikkelsen J.D., Kragh K.M., Bojsen K.;
RT   "An acidic class III chitinase in sugar beet: induction by Cercospora
RT   beticola, characterization, and expression in transgenic tobacco plants";
RL   Mol. Plant Microbe Interact. 6(4):495-506(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1106
FT                   /organism="Beta vulgaris"
FT                   /cultivar="Monova"
FT                   /mol_type="mRNA"
FT                   /tissue_type="leaves"
FT                   /db_xref="taxon:161934"
FT   CDS             18..899
FT                   /codon_start=1
FT                   /product="acidic class III chitinase SE2"
FT                   /note="pathogenesis-related protein"
FT                   /db_xref="GOA:P36910"
FT                   /db_xref="InterPro:IPR001223"
FT                   /db_xref="InterPro:IPR001579"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/Swiss-Prot:P36910"
FT                   /protein_id="AAB28479.1"
FT                   /translation="MAAKIVSVLFLISLLIFASFESSHGSQIVIYWGQNGDEGSLADTC
FT                   NSGNYGTVILAFVATFGNGQTPALNLAGHCDPATNCNSLSSDIKTCQQAGIKVLLSIGG
FT                   GAGGYSLSSTDDANTFADYLWNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLAR
FT                   ALAGHNNGQKTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQYDTSADNLL
FT                   SSWNQWTTVQANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAY
FT                   DSGYSSAIKSSV"
XX
SQ   Sequence 1106 BP; 313 A; 251 C; 226 G; 316 T; 0 other;
     acgtacccaa aacaagcatg gcagccaaaa tagtgtcagt tctattcctg atttctctct        60
     taatctttgc ttcattcgag tcctctcatg gctcccaaat tgtcatatac tggggccaaa       120
     atggtgatga aggaagtctt gctgacactt gtaactccgg aaactacggt accgtgatcc       180
     tagctttcgt agctaccttt ggtaacgggc aaaccccggc gctgaactta gctgggcact       240
     gtgaccctgc tacaaattgt aacagtctga gcagtgacat caaaacatgc caacaggcag       300
     gcattaaggt actcctctct ataggaggtg gtgccggagg ctattctctt tcctcaaccg       360
     atgatgcaaa cacatttgct gattacctct ggaacactta tcttgggggt cagtccagca       420
     cccgacccct tggagatgca gttttggatg gtattgattt cgatatcgag agtggtgatg       480
     gcagattttg ggatgaccta gctagagcat tggcaggtca taacaatggt cagaaaacag       540
     tgtacttatc agcagctcct caatgtccct tgccagatgc cagcttaagc actgccatag       600
     ccacaggcct attcgactat gtatgggttc agttctacaa taacccccct tgtcaatatg       660
     ataccagcgc tgataatctc ttgagctcgt ggaaccagtg gaccacagta caagctaacc       720
     agatcttcct cggactacca gcatcaactg atgctgccgg cagtggtttt attccagcag       780
     atgctcttac atctcaagtc cttcccacta tcaagggttc tgctaaatat ggaggagtca       840
     tgctatggtc aaaggcatat gacagtgggt acagcagtgc tattaaaagc agtgtttaat       900
     ttaaattact agtgtatcca aagatataga tacaaaataa gttatagaga tacatcaaaa       960
     aaccatctta gttttaaatt ttttatgcac cacaaaagct tgtaatacta atatactatt      1020
     atcataaatg gcttattgcc tcgctatatt ttggtgatta ttatatacac agttacaact      1080
     tcgcaattat gcgagtcttt ctaaaa                                           1106
//
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