 |
|
EBI DbfetchID S65042; SV 1; linear; genomic DNA; STD; PRO; 1858 BP. XX AC S65042; XX DT 22-JAN-1994 (Rel. 38, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE pel=pectate lyase [Pseudomonas marginalis, N6301, Genomic, 1858 nt]. XX KW . XX OS Pseudomonas marginalis OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RC GenBank staff at the National Library of Medicine created this entry [NCBI RC gibbsq 136829] from the original journal article. RP 1-1858 RX PUBMED; 7763884. RA Nikaidou N., Kamio Y., Izaki K.; RT "Molecular cloning and nucleotide sequence of the pectate lyase gene from RT Pseudomonas marginalis N6301"; RL Biosci. Biotechnol. Biochem. 57(6):957-960(1993). XX FH Key Location/Qualifiers FH FT source 1..1858 FT /organism="Pseudomonas marginalis" FT /mol_type="genomic DNA" FT /db_xref="taxon:298" FT gene 517..1659 FT /gene="pel" FT /note="pectate lyase, PL" FT CDS 517..1659 FT /codon_start=1 FT /transl_table=11 FT /gene="pel" FT /product="pectate lyase" FT /note="Method: conceptual translation with partial peptide FT sequencing; PL" FT /db_xref="GOA:Q51915" FT /db_xref="InterPro:IPR002022" FT /db_xref="InterPro:IPR006626" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/Swiss-Prot:Q51915" FT /protein_id="AAC60448.1" FT /translation="MTKPSTFTACKLASAVFGALLFSSVPAHAADIWLDVATTGWATQN FT GGTKGGSRAAANDIYTVKNAAELKKALSASAGSNGRIIKITGIIDVSEGKVYTKTADMK FT VRGRLDIPGKTTIVGIGSNAEIREGFFYAKENDVIIRNITVENPWDPEPIFDKDDGADG FT NWNSEYDGLTVEGANNVWVDHVTFTDGRRTDDQNGTEHERPKQHHDGALDVKNGANFVT FT ISYSVFKSHEKNNLIGSSDSRTTDDGKLKVTIHNTLFENISARAPRVRYGQVHLYNNYH FT VGSTSHKVYPFSYAHGVGKNSKIFSERNAFEIAGISGCDKIAGDYGGSVYRDTGSTLNG FT SALSCSWSSSIGWTPPYSYTPLAADKVAADVKAKAGAGKL" XX SQ Sequence 1858 BP; 466 A; 565 C; 479 G; 348 T; 0 other; tcgacgaaca gcagttggct atcttcatga ggcgctttcc cgagcatatc aaggcggtcg 60 ccatcgatac ttttgctctg gaaaaggacc gtttcagctc gccgttgacg ggcatagcca 120 atgctcaact gacgccgcat atcgccggca atactacgaa ggcaatcagg atggcctcac 180 ggcaaatcgt agataaaatt tccgcattca gacttgatcg agaaattcac ggttttgagc 240 agtagccccc aatcggctgt agccgtttag aaatcacttt gatgcccttc catccacgaa 300 gggctcattg ccgtccagtc cggccggcgg ctgtagtctt gcgaaagaga gcaaatcata 360 acgcaatcag ttgtacgaca tcgcaagaga cacatgatag tatttctaat gcagcggacg 420 ttcgattcgc tgcaccggtg gcaaggacgt ccgctcgaga aacgcgcaaa ccctgtgcgc 480 gtttaaaact caagttaatc aaggatctga ttactcatga caaaaccctc aactttcacc 540 gcctgcaaac tggccagtgc cgtattcggc gccctgctgt tttccagcgt tcccgcacat 600 gcggcggata tttggctgga cgtcgccacg accggctggg ccacgcagaa tggcgggacc 660 aagggcggct cccgggctgc cgcgaacgac atctacaccg ttaaaaacgc agccgaactg 720 aaaaaagccc tcagtgcttc ggcaggcagc aacggtcgca tcatcaagat caccggcatt 780 atcgacgtca gcgaaggcaa ggtttacacc aaaacggctg acatgaaggt tcgcgggcgc 840 ctggatattc ccggtaagac cacaatcgtg ggcatcggca gcaatgcgga gatccgcgaa 900 ggtttctttt acgcgaaaga aaatgacgta atcatccgca acatcaccgt cgaaaatccc 960 tgggaccccg agccaatctt tgataaggac gatggtgccg acggcaactg gaactccgag 1020 tacgacggcc tgaccgtcga aggcgccaac aacgtgtggg tcgatcacgt gaccttcacc 1080 gacggccgcc gtaccgatga ccagaacggc accgaacacg agcgtcccaa gcaacatcac 1140 gacggcgcgc tggacgtcaa gaacggcgcc aacttcgtaa ccatctctta ctcggtgttc 1200 aagtcccacg aaaaaaacaa cctgatcggt tccagcgact cgcgcaccac cgacgatggc 1260 aagctcaagg tcaccatcca caacaccctg ttcgagaaca tctccgcccg tgcgccccgc 1320 gtgcgctacg gccaagtgca tctgtacaac aactaccacg tgggcagcac cagccataag 1380 gtgtacccgt tctcatatgc ccatggcgtg ggcaagaact cgaaaatctt ctccgaacgt 1440 aacgccttcg agatcgccgg tatcagcggt tgcgacaaga tcgccggcga ttacggcggc 1500 agcgtctacc gtgacaccgg ctcgacactc aatggcagcg cactgagctg ctcgtggagt 1560 tcgagcatcg gctggacccc accctacagc tacacgccgc tggctgccga caaggtcgct 1620 gcggacgtca aagcgaaagc tggagccggt aagctctaag cgatagtgca acgtcagtga 1680 tataaaaaag ccctcggtga cgagggcttt ttcgtgcctg tgcctactgc accaactggt 1740 tgatctcgat gatcggcaac agtactgcca gcacgatcag cagcaccacc gcgcccatca 1800 ccacgatcat caaaggctca agcagtgccg tcatgcccat cgcccggcgt tcgatatc 1858 // |
|