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EBI DbfetchID S56898; SV 1; linear; genomic DNA; STD; PRO; 3240 BP. XX AC S56898; XX DT 30-NOV-1993 (Rel. 37, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 5) XX DE hupS=hydrogenase small subunit, hupL=hydrogenase large subunit [Alcaligenes DE hydrogenophilus, Genomic, 3240 nt]. XX KW . XX OS Alcaligenes hydrogenophilus OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; OC Alcaligenaceae; Alcaligenes. XX RN [1] RC GenBank staff at the National Library of Medicine created this entry [NCBI RC gibbsq 127349] from the original journal article. RP 1-3240 RX PUBMED; 1294332. RA Yagi K., Seto T., Terakado M., Umeda F., Doi T., Imanishi T., Miura Y.; RT "Nucleotide sequences of membrane-bound hydrogenase gene in Alcaligenes RT hydrogenophilus"; RL Chem. Pharm. Bull. 40(12):3292-3296(1992). XX FH Key Location/Qualifiers FH FT source 1..3240 FT /organism="Alcaligenes hydrogenophilus" FT /mol_type="genomic DNA" FT /db_xref="taxon:516" FT gene 121..1212 FT /gene="hupS" FT /note="hydrogenase small subunit, HupS" FT CDS 121..1212 FT /codon_start=1 FT /transl_table=11 FT /gene="hupS" FT /product="hydrogenase small subunit" FT /note="HupS" FT /db_xref="GOA:P33375" FT /db_xref="InterPro:IPR001821" FT /db_xref="InterPro:IPR006137" FT /db_xref="InterPro:IPR006311" FT /db_xref="InterPro:IPR017909" FT /db_xref="UniProtKB/Swiss-Prot:P33375" FT /protein_id="AAB25779.1" FT /translation="MIETFYEVMRRQGISRRSFLKYCSLTATSLGLSPVFVPKIVHAME FT TKPRTPVLWLHGLECTCCSESFIRSAHPLAKDVVLSMISLDYDDTLMAAAGHQAEAILG FT EVMTKYKGNYILAVEGNPPLNQDGMSCIIGGKPFIDQLRHVAKDAKAIISWGSCASWGC FT VQAAKANPTQATPIHKVITDKPIIKVPGCPPIAEVMTGVITYMLTFDRFPELDRQGRPK FT MFYSQRIHDKCYRRPHFDAGQFVESWDDESARKGYCLYKVGCKGPTTYNACSTTRWNGG FT TSFPIQSGHGCIGCSEDGFWDKGSFYSRLTNIHQFGIEANADSVGVTAVGVVGAATAAH FT AAVSAIKRARHKDAAQDTAATQK" FT gene 1248..3107 FT /gene="hupL" FT /note="hydrogenase large subunit, HupL" FT CDS 1248..3107 FT /codon_start=1 FT /transl_table=11 FT /gene="hupL" FT /product="hydrogenase large subunit" FT /note="HupL" FT /db_xref="GOA:P33374" FT /db_xref="InterPro:IPR001501" FT /db_xref="InterPro:IPR018194" FT /db_xref="UniProtKB/Swiss-Prot:P33374" FT /protein_id="AAB25780.1" FT /translation="MATYETQGFKLNDSGRRIIVDPVTRIEGHMRCEVNLDANNVIRNA FT VSTGTMWRGLEVILKRADPADAWAFVERICRVCTGCHALASVRAVEDALGIKIPKNAHL FT IREMMAKTLQVHDHVVHFYHLHALDWVDVVSALNADPKRTSALQQTVSPAHPLSSPGYF FT RDVQIRLKKFVESGQLGPFMNGYWGNPAYKLPPEANLMAVTHYLEALDLQKEWVKIHTI FT FGGKNPHPNYLVGGMPCVDSNLDGSGAAGAPLNMERLNFVRARIEEAIEFVKNVYLPDV FT LAIGTIYKDAGWLYGGGLSALNVMDYGTYPRVNYDPTTDQLPGGAILNGNWDEIFPVDP FT RDPEQVQEFVAHSWYKYADETKGLHPWDGVTEPNFVLGPKAVGTPTDIKQLDEDAKYSW FT IKVAALAGHAMEVGPLVALHPRIRARAEDPKSYRAHYLREQVENSARAINTGIPQALGL FT KQTDYTVKQLLPTTIGRTLARALEAQYCGNMMLDDWHEMMANIKAGDLTTANVDKWEPS FT AWPKEAKGVGHVAAPRGACGHWIRIKDGKIENYQCVVPTTWNGSPRDSKGQIGAFEASL FT MNTPMAKPEEPVEILRTVHSFDPLPGCPPTCTADARARCGQVR" XX SQ Sequence 3240 BP; 704 A; 941 C; 981 G; 614 T; 0 other; gatggcgcgg aagttgcggt ttgtggttgt cgtcgcgcgc tctgtacgcg cttgcagcat 60 tgcccgccgg tggcaggcag gggcagtgat acagaaggta gaaattagag gagactaagg 120 atgatcgaaa cgttctacga agtaatgcgg cgccaaggca tatcgcggcg cagcttcctc 180 aaatactgtt cgctcacggc gacctctctc ggactcagtc ccgtctttgt gcctaagatt 240 gtccatgcga tggaaaccaa gcctcgcacg cccgtgcttt ggctccacgg cctcgaatgc 300 acttgctgtt ccgagtcgtt catccgttcg gcccatcctc ttgccaagga tgtggtgttg 360 tcgatgattt cgctggatta cgacgacacg ctgatggcag cggccggtca tcaggcggag 420 gcgatccttg gcgaggtgat gacgaaatac aaagggaact acatcctcgc cgttgagggc 480 aatccgcccc tcaatcagga cggcatgagt tgcatcatcg gcggcaagcc ctttattgat 540 caactgcgcc acgttgccaa ggatgcaaag gcgatcatct cttggggttc ctgcgcgtcc 600 tgggggtgcg tgcaggctgc caaagcgaat cccacgcagg cgactcccat tcacaaggtc 660 attaccgaca agcccatcat caaggtgcct ggctgcccgc caatcgcgga agtcatgacc 720 ggggtgatca cttatatgct gacctttgac cgttttcctg aactggaccg ccaggggcgg 780 ccgaaaatgt tctatagcca gcgaatccac gacaagtgct accgtcggcc gcatttcgac 840 gccggtcagt tcgtggagtc ctgggacgac gagtcggcgc gcaagggcta ttgcctatac 900 aaggtcggct gcaaggggcc gaccacctac aacgcctgtt ctaccacccg ctggaacggc 960 ggtaccagct tcccgatcca gtcgggccac ggctgtatcg gctgctccga ggacggcttt 1020 tgggataagg gctcgttcta cagtcggctg accaatattc atcagttcgg cattgaagcc 1080 aatgccgatt cagtcggcgt aactgcagtc ggtgtcgtcg gcgccgcgac cgctgcgcat 1140 gccgctgttt ctgcgatcaa gcgcgcaagg cataaggatg cggcacagga tacggccgcc 1200 acgcagaaat aggcagggcg cagcgacaga aaacgcgagg ataagacatg gcaacatacg 1260 aaacgcaagg cttcaagctg aacgactcgg ggcgacgcat catcgtcgac ccagttaccc 1320 gaatcgaagg ccacatgcgc tgcgaggtga atcttgacgc caacaacgtg atccgcaatg 1380 cggtttccac tggaacgatg tggcgcgggc ttgaagtcat cctcaaaagg gccgatccgg 1440 ccgatgcgtg ggcgttcgtt gagcgcatct gtcgggtatg cacaggttgc catgcgctgg 1500 catcggtgcg tgcagtggag gatgcgctcg ggatcaagat cccaaagaat gcgcatctga 1560 ttcgcgagat gatggcgaaa acgctgcagg tccacgacca cgtggtgcac ttctaccatc 1620 tacatgcgct cgactgggtc gatgtcgttt cggcgctcaa tgcggacccc aagcgcacct 1680 cagcgctgca acagacagta tcgccggcgc acccgctctc gtcgccaggc tatttccgcg 1740 atgtccagat ccggttaaag aagtttgtcg agagcggaca actcggtccc ttcatgaatg 1800 gttactgggg taaccccgcg tacaagctgc cgccggaagc caatctgatg gcggtgaccc 1860 attatctgga agcactcgac ctgcaaaaag aatgggtaaa aatccatacc atcttcggag 1920 gcaagaatcc gcatccgaac tatcttgttg gtggcatgcc atgcgtcgat tcaaatctcg 1980 atggcagtgg ggcggccggc gccccgctca acatggagcg cctgaatttc gtccgagcgc 2040 gtatcgaaga agcgatcgaa ttcgtcaaga acgtctacct tccggacgtg ctcgcgatcg 2100 gcaccattta taaggatgcc ggctggttgt acggcggcgg tctttccgcg cttaatgtga 2160 tggactatgg aacctacccg agggtcaatt acgatcccac caccgaccag ctccccggcg 2220 gcgccattct aaatggcaac tgggacgaaa tcttcccggt ggacccgcga gatcccgagc 2280 aggtgcagga gtttgttgcg cactcctggt acaagtatgc cgacgaaaca aagggactgc 2340 atccctggga cggcgtgacg gaaccgaact tcgtgcttgg ccccaaggcc gttggcacgc 2400 cgaccgacat caagcagctc gatgaagacg cgaagtattc atggatcaaa gtcgccgcgc 2460 tggcgggaca cgcgatggag gtcggccccc ttgtcgcgct acatcctcgg atacgtgcac 2520 gcgctgaaga ccccaaatcg tatcgggcgc attatctacg cgagcaggtc gagaattcgg 2580 cgcgagcgat caacaccgga atcccgcagg cgttgggcct caagcaaacg gactatacgg 2640 tgaagcaact gcttccgacc accattggcc ggacgcttgc acgcgcgcta gaggcccagt 2700 attgcggcaa catgatgctc gacgactggc acgagatgat ggccaacatc aaggcggggg 2760 atctcacgac ggccaatgtc gacaagtggg agccgagcgc ctggccaaag gaggccaagg 2820 gggtcggcca tgtcgcggcg ccccgcgggg cgtgtgggca ctggatccgc atcaaggacg 2880 gcaagatcga gaactatcag tgcgtcgttc ccaccacatg gaatggcagt ccgcgcgaca 2940 gcaaggggca gattggcgcc ttcgaggcat cgctgatgaa taccccgatg gccaagccag 3000 aggagccggt cgagattttg cgaaccgtgc attccttcga tccgttgcct ggctgtccac 3060 ccacgtgtac agccgatgca agagcgcgtt gtggtcaggt gcgctaaccc cggggttcgc 3120 ccgtgccgcc cgcgcgtgcg gcacggggca ttgcaacaag agtgagagaa caagatgtcc 3180 atgcatgcgg acgtaccaaa cgtcgcgggg gcagcccctc agacgagcgc gaggtgctca 3240 // |
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