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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   S37645; SV 1; linear; mRNA; STD; PLN; 522 BP.
XX
AC   S37645;
XX
DT   16-FEB-1993 (Rel. 34, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
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DE   Aps-1(1)=acid phosphatase-1(1) [Lycopersicon esculentum=tomatoes, Mill.,
DE   cv. VFNT, mRNA Partial, 522 nt].
XX
KW   .
XX
OS   Solanum lycopersicum
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Lycopersicon.
XX
RN   [1]
RC   GenBank staff at the National Library of Medicine created this entry [NCBI
RC   gibbsq 105387] from the original journal article.
RP   1-522
RX   PUBMED; 1368210.
RA   Tanaka H., Hoshi J., Nakata K., Chung I.K., Ito T., Ohta A., Takagi M.;
RT   "Partial sequence of acid phosphatase-1(1) gene (Aps-1(1)) linked to
RT   nematode resistance gene (Mi) of tomato";
RL   Biosci. Biotechnol. Biochem. 56(4):583-587(1992).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..522
FT                   /organism="Solanum lycopersicum"
FT                   /cultivar="VFNT"
FT                   /mol_type="mRNA"
FT                   /note="Mill."
FT                   /db_xref="taxon:4081"
FT   gene            <1..>522
FT                   /gene="Aps-1(1)"
FT                   /note="acid phosphatase-1(1), Apase-1(1)"
FT   CDS             <1..>522
FT                   /codon_start=1
FT                   /gene="Aps-1(1)"
FT                   /product="acid phosphatase-1(1)"
FT                   /note="conceptual translation presented here differs from
FT                   translation in publication; mismatch(67[L->W]); Apase-1(1)"
FT                   /db_xref="GOA:P27061"
FT                   /db_xref="InterPro:IPR014403"
FT                   /db_xref="UniProtKB/Swiss-Prot:P27061"
FT                   /protein_id="AAC60539.2"
FT                   /translation="FVVETNNLSPGKTIPEEGADYVKEYMVGPGYKMEIDRVSDEAGEY
FT                   AKSVDLGDDGRDVWIFDVDETWLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSS
FT                   LKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYK
FT                   SERRNAMVEEG"
XX
SQ   Sequence 522 BP; 156 A; 69 C; 153 G; 144 T; 0 other;
     ttcgtggttg aaacaaataa tttaagtcca gggaagacga ttccagagga aggggctgat        60
     tatgtcaagg aatatatggt gggtccaggt tataagatgg agattgatag ggtttcggat       120
     gaggcaggag aatatgccaa aagtgttgat ttgggagatg atggaagaga tgtgtggatt       180
     tttgatgttg acgaaacttg gctttctaat cttccttatt attctgatca tcgttatgga       240
     ttggaggtat ttgatgatgt ggaatttgat aaatgggttg agaatggaac ggcgccagcc       300
     ttggggtcca gcttgaagct ttatcaagaa gttctgaaac tgggattcaa agttttcttg       360
     ctgactgggc gcagtgaaag acacagaagt gttactgtgg agaatttgat gaatgctgga       420
     ttccacgatt ggcataagct cattctgaga ggctcggacg accatggcaa aacagcaaca       480
     acctataaat cagagagacg aaatgcgatg gtagaagaag ga                          522
//
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