 |
|
EBI DbfetchID M97222; SV 1; linear; genomic DNA; STD; PRO; 2879 BP. XX AC M97222; XX DT 29-AUG-1992 (Rel. 33, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Methanobacterium thermoformicicum plasmid-encoded type II DE restriction-modification system (TIR) gene complete cds, (TIM) gene, DE complete cds. XX KW . XX OS Methanothermobacter thermautotrophicus OC Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; OC Methanobacteriaceae; Methanothermobacter. XX RN [1] RP 1-2879 RX PUBMED; 1512204. RA Noelling J., de Vos W.M.; RT "Characterization of the archaeal, plasmid-encoded type II RT restriction-modification system MthTI of Methanobacterium thermoformicicum RT strain THF: Homology to the bacterial NgoPII system from Neisseria RT gonorrhoeae"; RL J. Bacteriol. 174(17):5719-5726(1992). XX FH Key Location/Qualifiers FH FT source 1..2879 FT /organism="Methanothermobacter thermautotrophicus" FT /strain="THF" FT /mol_type="genomic DNA" FT /db_xref="taxon:145262" FT promoter 127..161 FT gene 187..1032 FT /gene="TIR" FT CDS 187..1032 FT /codon_start=1 FT /transl_table=11 FT /gene="TIR" FT /db_xref="GOA:P29565" FT /db_xref="InterPro:IPR019046" FT /db_xref="UniProtKB/Swiss-Prot:P29565" FT /protein_id="AAA73369.1" FT /translation="MSNLLQAIMNIKSIQERNLGSYKGVQDSKNRMNQMGVTLEVFLKD FT AFCNTFDIENKDLVYSEYFSYLGNQNNPPDMILKGGDAVEVKKITGIKTSIQLNSSYPK FT SKLFVSDSRITEACKNCEDWEVKDIIYAIGTIPNRVLKLMFFVYGDCYAASPSIYQRIV FT EEVKGGLHSTGLEFSETNELGRINRVDPLGITDLRVRGMWIIKHPIKVFKNIIPPESIK FT NNNFNLIALMKAEKYKQFPKKDRKRIEAEDNIEVTDVKIKDPDNPAKLLDSVLVRYDEI FT " FT promoter 895..932 FT /gene="TIR" FT gene 1029..2021 FT /gene="TIM" FT CDS 1029..2021 FT /codon_start=1 FT /transl_table=11 FT /gene="TIM" FT /db_xref="GOA:P29567" FT /db_xref="HSSP:1DCT" FT /db_xref="InterPro:IPR018117" FT /db_xref="UniProtKB/Swiss-Prot:P29567" FT /protein_id="AAA73370.1" FT /translation="MNMDIASFFSGAGGLDLGFTKAGFNIVFANDNWKGCWKTFEKNHG FT IKINKKPIEWLKPSEIPDVVGFIGGPPCQSWSLAGSMCGADDPRGKTFYAYVDLVKEKD FT PLFFLAENVPGIVSRTHLPEFKRLVNSFIDIGYNVEYKVLNAKDYGVPQDRKRVFIVGY FT REDLNLKFEFPKPLNKKVTLRDAIGDLPEPKPALEKNRSNGENLEVPNHEYMTGTFSSR FT YMSRNRVRSWDEVSFTIQAGGRHAPCHPQANKMIKVGPDKFIFDPESPKPYRRLSVREC FT ARIQGFPDDFIFYYKNVADGYTMVGNAVPVKLAEELAKKIKKDLEGVLN" FT terminator 1050..1056 FT /gene="TIM" FT terminator 2035..2044 XX SQ Sequence 2879 BP; 966 A; 531 C; 605 G; 777 T; 0 other; gtcaacgcag tcctcatatt caccccgata ttggctcaaa tcttcttcaa agagtctaca 60 aatattccct gcccgcctaa ttttaaccac catagtttta ttttttttaa tatctaacta 120 tcatagttta tttcagaaca gtctaaaaat tctaatagat gtcattgaga tgagggggta 180 aataacatgt caaatttatt gcaagctatc atgaatataa aaagtattca agaaagaaac 240 ttgggatcat ataagggtgt ccaagactcc aaaaatagaa tgaaccagat gggagttaca 300 ttagaggttt tcctaaaaga tgctttctgc aatacatttg atatagaaaa caaagacctt 360 gtgtacagtg aatacttttc ttaccttgga aatcaaaata acccccccga catgatcctg 420 aaggggggtg acgcagttga agtcaagaag ataactggaa taaaaacttc gattcaactt 480 aacagttcat accccaagtc aaagctcttt gtttctgaca gcagaataac agaggcttgc 540 aagaactgtg aagattggga ggttaaagac ataatatatg ccatagggac tatcccaaac 600 agagtcctta agttaatgtt ttttgtttat ggggactgtt acgcggcaag cccttctatc 660 taccagagaa ttgttgaaga agtaaagggg ggtctacata gtactggcct agaatttagt 720 gaaacaaacg agctaggtag aattaacagg gtagaccccc tgggaattac agacctaagg 780 gtacgtggta tgtggatcat caaacacccc ataaaagtgt ttaaaaacat aatcccccca 840 gaatcaatta aaaataataa ctttaattta attgccctga tgaaagcaga gaagtataaa 900 caatttccaa aaaaagatag gaaaagaatt gaggcagaag ataatatcga agttaccgat 960 gtaaaaataa aagatcctga caaccctgcc aaactattag atagcgttct tgtgaggtat 1020 gatgaaatat gaatatggac atagcgtcat ttttttcggg tgctggaggt ctcgacttag 1080 ggtttacaaa agcaggtttt aatattgtct ttgctaacga caattggaaa gggtgctgga 1140 aaactttcga aaaaaaccac ggaataaaaa taaataaaaa acccattgaa tggttaaaac 1200 cctcagaaat acctgacgtg gttggtttca tagggggacc cccatgccag agctggagcc 1260 tggcaggttc aatgtgcggg gcagacgacc cccgtggtaa aacattttat gcatacgtgg 1320 atttagtcaa agaaaaagat cccctatttt tcttggcaga aaacgtgcca gggatagttt 1380 caagaacaca cctccctgaa ttcaaaagac ttgtaaactc attcatagac atagggtaca 1440 acgtagaata taaggtgctc aacgcaaagg actacggcgt gccacaagac agaaaaaggg 1500 tctttatcgt cgggtaccgt gaggacttaa acctaaaatt tgagtttcct aaacctttaa 1560 acaagaaagt gaccctgagg gacgctattg gtgaccttcc tgaacccaag cccgcgcttg 1620 aaaaaaacag gtcaaatggg gaaaacttgg aagtgccaaa ccacgaatac atgacaggga 1680 cattttcaag caggtatatg tcaaggaaca gggtaaggag ttgggatgaa gtttcattta 1740 caattcaagc gggggggcgc catgccccat gccacccaca ggctaataaa atgataaagg 1800 tgggacctga caagttcata tttgatccag aaagtcctaa accctaccgc aggttatccg 1860 tccgcgaatg cgctaggata caaggttttc ctgatgactt tatattctat tataaaaacg 1920 ttgcagacgg ttatactatg gttggtaacg ctgttcctgt gaaattagca gaagaactag 1980 caaaaaagat aaaaaaagat ttagagggcg ttttgaatta gaattagatt tgtgttattt 2040 ttttaaggtc acagagagta aattgcgagt tgtaaccagg aacaatacct cttttaaggt 2100 cctcttttaa ggtcacagag agtaaattgc gagttgtaac caggaacaat acctctttta 2160 aggtcacaga gagtaaattg cgagttgtaa ccaggaacaa tacctcaaat ttttttcatg 2220 agtaattttt ttcatgagcc aactagccat caagcctgca ccatttgatg tgaagtcaga 2280 gagatactgt tcaactgcaa aaaggtattt atattataaa aaatcaaacc tttcatatat 2340 aaaaaatttt caaggttttt tacatggcga aatacaagaa gtgttgaaca gaaagatttg 2400 cctgcttttg ctacaaggtg tccctgttac aatgtctctg ttacaagtgt tacaagtaga 2460 aattcactct ctgtttccca agcaatgggt tgttttttgt tacaagtaga aattcactct 2520 ctctgtccca ccgtgggccc atgtgcttat atagaaattt ggtattaatt cttttcaatt 2580 agaaatatat atacaataag aagttatgat tacatataga aatgaggttt cgaattgtaa 2640 agttgtattg cggggagctg cagatgtttg agaagagacc tagacttttc aaaaacaggg 2700 atgtcctcag cccgctcttt gtgcctgaca ccctgcagga cagaaaggaa gaggtgggtg 2760 ctatcagcca gtacttgggg tacatcctcg acggcgccac cccaccccac ctgttgattg 2820 tagggccccc aggatctggg aagactgtca cgacgaagta tgtgatcaac gaactcgag 2879 // |
|