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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M95201; SV 1; linear; mRNA; STD; PLN; 1995 BP.
XX
AC   M95201;
XX
DT   04-JUN-1993 (Rel. 36, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 4)
XX
DE   Potato 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (shkB) mRNA,
DE   complete cds.
XX
KW   3-deoxy-D-arabino-heptulosonate 7-phosphate synthase.
XX
OS   Solanum tuberosum (potato)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
XX
RN   [1]
RP   1-1995
RX   PUBMED; 16653023.
RA   Zhao J., Herrmann K.M.;
RT   "Cloning and Sequencing of a Second cDNA Encoding
RT   3-Deoxy-d-arabino-Heptulosonate 7-Phosphate Synthase from Solanum tuberosum
RT   L";
RL   Plant Physiol. 100(2):1075-1076(1992).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1995
FT                   /organism="Solanum tuberosum"
FT                   /cultivar="Superior"
FT                   /mol_type="mRNA"
FT                   /tissue_type="tuber"
FT                   /db_xref="taxon:4113"
FT   CDS             110..1645
FT                   /codon_start=1
FT                   /gene="shkB"
FT                   /product="3-deoxy-D-arabino-heptulosonate 7-phosphate
FT                   synthase"
FT                   /EC_number="4.1.2.15"
FT                   /db_xref="GOA:P37822"
FT                   /db_xref="InterPro:IPR002480"
FT                   /db_xref="UniProtKB/Swiss-Prot:P37822"
FT                   /protein_id="AAA33840.1"
FT                   /translation="MALSNTLSLSSSKSLVQSHLLHNPLPQPRFSLFPTTQHGRRHPIS
FT                   AVHAAEPSKTAVKQGKWSLDSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEAR
FT                   SLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKV
FT                   GRMAGQFAKPRSDPLEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATL
FT                   NLLRAFATGGYAAMQRVTEWNLDFVENCEQGDRYQELAHRVDEALGFMAAAGLTVDHPI
FT                   MSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGV
FT                   ANPLGIKVSQKMDPNELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAG
FT                   QIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNV
FT                   TECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRMSTQRL"
FT   polyA_site      1995
FT                   /gene="shkB"
XX
SQ   Sequence 1995 BP; 544 A; 393 C; 461 G; 597 T; 0 other;
     gcgctcctcc attgatacct cttccccttt ctctctctaa aaaagtttgt cttttttata        60
     gtgagagaaa aaagaggatt caagaatcat caaaagctaa aaaataatca tggctttatc       120
     aaacacctta tcattgtcat catcaaaatc ccttgttcaa tctcatcttc tccataaccc       180
     tttaccccaa cctcgttttt ccctttttcc gaccacccaa catgggcggc gccaccccat       240
     ctccgccgta catgcggcgg agccatccaa gactgcagtt aagcaaggaa aatggagtct       300
     tgatagctgg aaaaccaaga aagctttgca acttcctgaa tacccagatg agaaagaact       360
     tgaatctgtg cttaaaacac ttgaaatgaa tccaccactt gtgtttgctg gtgaggcaag       420
     gagtttggaa gagaagcttg gtgaggctgc attggggaaa gcttttttgt tacaaggtgg       480
     agattgtgct gagagtttta aggaatttaa tgccaataat attcgtgata cttttaggat       540
     tttgcttcag atgagtgttg ttcttatgtt tggtggacaa gttcctgtga ttaaggttgg       600
     aagaatggcg ggtcagtttg caaaaccaag atcagatccg ttggaggaga taaatggagt       660
     gaagctacca agttacaagg gtgacaatat caatggtgat acatttgatg agaagtcaag       720
     aattccggat cctcataggc ttattagggc atacatgcaa tctgctgcga ctcttaatct       780
     tcttagagct tttgctactg gaggttatgc tgcaatgcag cgggtcaccg aatggaatct       840
     tgattttgtg gagaactgtg agcagggaga taggtatcag gaactagctc acagggttga       900
     tgaagcctta ggattcatgg ctgctgctgg actcacagtt gaccacccta tcatgtcaac       960
     aactgatttc tggacatccc acgagtgctt gcttcttcct tatgaacaag cacttacaag      1020
     ggaggattca acttctggtc ttttctatga ttgttctgct cacatggttt gggttgggga      1080
     gcgaaccagg caactagacg gtgctcatgt cgagtttttg agaggagttg caaaccctct      1140
     tggcataaag gtgagtcaaa aaatggatcc aaatgagcta attaagctca tagacatcct      1200
     gaacccagcc aataagcctg gaagaattac tgtaattgtt agaatgggtg ctgagaacat      1260
     gagagtgaaa ctttcccact tggtcagggc agtacgagga gctggtcaga ttgtgacatg      1320
     ggtttgtgat ccaatgcacg ggaataccat caaggcacca tgtggactca aaacccgtgc      1380
     tttcgattca atcctggctg aggtccgagc tttcttcgat gtgcatgagc aagaaggaag      1440
     ccaccctggt ggtattcacc tagaaatgac agggcaaaat gtgactgagt gcattggtgg      1500
     atcacgaaca gtaacctatg acgatttggg ctctcgctac cacactcatt gtgacccaag      1560
     attgaatgct tctcagtctc ttgaactttc cttcatcgta gctgagagac taagaagacg      1620
     aagaatgtcc actcaacgtc tgtaggctta tctaattacc tgtacttttt tagtatggat      1680
     tcttgttctc ttggtatcca ataacttata tatgtggcct ctggccattt gagctgctgt      1740
     ttggatccaa tgttgaacat gttactaata aacatggcag agcaacttgc ctatgaggta      1800
     aatagatttc tgcagagatc aaaggggaaa tgaacatcaa gttattagtc gatttatccg      1860
     gtatctgttc tgtttatttt agtttggact gtaagtctag ggtataagga tgttcttttt      1920
     ctttccttga tgtatgaatg atactttgag atactggttt tgctgtttta gtctaatgtg      1980
     tttgcctacc ttgtc                                                       1995
//
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