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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M94537; SV 1; linear; mRNA; STD; ROD; 1831 BP.
XX
AC   M94537;
XX
DT   04-JUN-1992 (Rel. 32, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 16)
XX
DE   Rattus norvegicus cyclic nucleotide phosphodiesterase (CaM-PDE) mRNA,
DE   complete cds.
XX
KW   calcium/calmodulin-dependent phosphodiesterase;
KW   cyclic nucleotide phosphodiesterase.
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
XX
RN   [1]
RP   1-1831
RX   PUBMED; 1326532.
RA   Repaske D.R., Swinnen J.V., Jin S.L., Van Wyk J.J., Conti M.;
RT   "A polymerase chain reaction strategy to identify and clone cyclic
RT   nucleotide phosphodiesterase cDNAs. Molecular cloning of the cDNA encoding
RT   the 63-kDa calmodulin-dependent phosphodiesterase";
RL   J. Biol. Chem. 267(26):18683-18688(1992).
XX
DR   ASTD; TRAN00000004099.
DR   Ensembl-Gn; ENSRNOG00000036828; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000055272; Rattus_norvegicus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1831
FT                   /organism="Rattus norvegicus"
FT                   /strain="Sprague-Dawley"
FT                   /mol_type="mRNA"
FT                   /clone_lib="Arb library"
FT                   /tissue_type="brain"
FT                   /db_xref="taxon:10116"
FT   CDS             75..1682
FT                   /codon_start=1
FT                   /gene="CaM-PDE"
FT                   /standard_name="calmodulin-dependent phosphodiesterase"
FT                   /product="cyclic nucleotide phosphodiesterase"
FT                   /note="63 kDa protein"
FT                   /db_xref="GOA:Q01066"
FT                   /db_xref="InterPro:IPR002073"
FT                   /db_xref="InterPro:IPR003607"
FT                   /db_xref="InterPro:IPR013706"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q01066"
FT                   /protein_id="AAA16530.1"
FT                   /translation="MELSPRSPPEMLESDCPSPLELKSAPSKKMWIKLRSLLRYMVKQL
FT                   ENGEVNIEELKKNLEYTASLLEAVYIDETRQILDTEDELRELRSDAVPSEVRDWLASTF
FT                   TQQTRAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPTYSTAVHNCLKNLDVW
FT                   CFDVFSLNRAADDHALRTIVFELLTRHSLISRFKIPTVFLMSFLEALETGYGKYKNPYH
FT                   NQIHAADVTQTVHCFLLRTGMVHCLSEIEVLAIIFAAAIHDYEHTGTTNSFHIQTKSEC
FT                   AILYNDRSVLENHHISSVFRMMQDDEMNIFINLTKDEFVELRALVIEMVLATDMSCHFQ
FT                   QVKTMKTALQQLERIDKSKALSLLLHAADISHPTKQWSVHSRWTKALMEEFFRQGDKEA
FT                   ELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKSVQPLTDDDSKSKSQPS
FT                   FQWRQPSLDVDVGDPNPDVVSFRSTWTKYIQENKQKWKERAASGITNQMSIDELSPCEE
FT                   EAPSSPAEDEHNQNGNLD"
XX
SQ   Sequence 1831 BP; 445 A; 504 C; 483 G; 399 T; 0 other;
     agccctgcta gcttgggccg atcccagaca caccggcctg gctagtccac gccagccgca        60
     gacggtggct gagcatggag ctgtcccccc gcagtcctcc agagatgctg gagtcggatt       120
     gcccgtcacc cctggagctg aagtcagccc ccagcaagaa gatgtggatt aagctacggt       180
     ctctgctgcg ctacatggtg aagcagttgg agaatgggga ggttaacatc gaggagctga       240
     agaaaaacct ggaatacaca gcttccctgc tggaagctgt ctacattgat gagacaaggc       300
     aaatcttgga cactgaagat gagcttcggg aacttcggtc agatgccgtg ccttcagagg       360
     tgcgggactg gctggcctcc accttcaccc agcagacccg agccaaaggt cgcagggcag       420
     aagagaaacc caagttccga agcattgtgc acgctgtgca ggctgggatc ttcgtggagc       480
     ggatgttccg gagaacgtat accgctgtgg gtcccacgta ttctactgca gtccacaact       540
     gtctcaagaa cctggacgtc tggtgcttcg atgtcttctc tttgaaccgg gcagctgatg       600
     accacgctct gaggaccatt gtttttgagt tgctgactcg gcatagcctc atcagccgct       660
     tcaagattcc cacagtgttt ctgatgagtt ttctggaggc cttagagaca ggctacggga       720
     aatataagaa cccttaccac aaccagatcc atgccgctga cgtgacccag actgtccatt       780
     gcttcctgct ccgcacaggc atggtgcact gcctgtcaga gattgaggtc ttggccatca       840
     tcttcgcggc agccatccat gactatgagc acacaggcac aaccaacagc ttccacatcc       900
     agaccaagtc agaatgcgcc atcctgtaca atgaccgatc ggtgctggag aatcaccaca       960
     tcagctctgt tttccgaatg atgcaggatg atgagatgaa catttttatc aatctcacca      1020
     aggatgaatt cgtagagctg cgggccctgg tcattgagat ggtgttagcc acagacatgt      1080
     cctgccattt ccagcaagtg aagactatga agacagccct gcagcagctt gaaaggattg      1140
     acaaatccaa ggccctgtct cttctgcttc atgctgctga catcagccac ccaaccaagc      1200
     agtggtcagt ccacagccgc tggaccaagg ccctaatgga agagttcttc cgccagggtg      1260
     acaaggaggc agagctgggc ttgcccttct ctccactctg tgaccgcacc tccacattgg      1320
     tggcccagtc ccagataggt ttcattgact tcattgtgga gcccaccttc tctgtgctga      1380
     ctgatgtggc agaaaagagt gtccagccct tgacagatga tgattccaag tctaaaagtc      1440
     agcccagctt ccagtggcgc cagccttctt tagatgtgga cgtaggagac cccaaccctg      1500
     atgtggtcag tttccgctcc acctggacca agtacattca agagaataaa cagaagtgga      1560
     aggaacgggc agcgagtggc atcaccaacc agatgtccat tgatgaactg tccccctgtg      1620
     aggaagaagc cccatcctcc cctgcagaag atgagcacaa ccagaatggg aatctggatt      1680
     agggaactgg gagctggcca ggtcctcact gagtccaaag tcttcgatgt cattagcact      1740
     atccatcagg actggttccc ccatctgctc caagggagtg tgttggttgt gatagagaca      1800
     gcccacctga gagccaaatg ttggagcagg t                                     1831
//
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