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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M93292; SV 1; linear; mRNA; STD; MUS; 1249 BP.
XX
AC   M93292;
XX
DT   06-JUN-1992 (Rel. 32, Created)
DT   07-OCT-2008 (Rel. 97, Last updated, Version 7)
XX
DE   Mouse homeobox protein (Hox1.11) mRNA, complete cds.
XX
KW   homeobox protein.
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus.
XX
RN   [1]
RP   1-1249
RX   DOI; 10.1073/pnas.89.14.6280
RX   PUBMED; 1352886.
RA   Tan D.-P., Ferrante J., Nazarali A., Shao X., Kozak C.A., Guo V.,
RA   Nirenberg M.;
RT   "Murine Hox-1.11 homeobox gene structure and expression";
RL   Proc. Natl. Acad. Sci. U.S.A. 89(14):6280-6284(1992).
XX
DR   ASTD; TRAN00000180619.
DR   Ensembl-Gn; ENSMUSG00000014704; Mus_musculus.
DR   Ensembl-Tr; ENSMUST00000014848; Mus_musculus.
DR   TRANSFAC; T01698; T01698.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1249
FT                   /organism="Mus musculus"
FT                   /map="chromosome 6"
FT                   /strain="Swiss"
FT                   /mol_type="mRNA"
FT                   /dev_stage="11.5 day old embryo"
FT                   /db_xref="taxon:10090"
FT   CDS             99..1217
FT                   /codon_start=1
FT                   /gene="Hox1.11"
FT                   /product="homeobox protein"
FT                   /db_xref="GOA:P31245"
FT                   /db_xref="InterPro:IPR001356"
FT                   /db_xref="InterPro:IPR001827"
FT                   /db_xref="InterPro:IPR009057"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="InterPro:IPR017970"
FT                   /db_xref="InterPro:IPR020479"
FT                   /db_xref="MGI:96174"
FT                   /db_xref="UniProtKB/Swiss-Prot:P31245"
FT                   /protein_id="AAA37836.1"
FT                   /translation="MNYEFEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHS
FT                   TLIPPPFEQTIPSLNPGSHPRHGAGVGGRPKSSPAGSRGSPVPAGALQPPEYPWMKEKK
FT                   AAKKTALPPAAASTGPACLGHKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKY
FT                   LCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKFKNLEDSDKVEED
FT                   EEEKSLFEQALSVSGALLEREGYTFQQNALSQQQAPNGHNGDSQTFPVSPLTSNEKNLK
FT                   HFQHQSPTVPNCLSTMGQNCGAGLNNDSPEAIEVPSLQDFNVFSTDSCLQLSDALSPSL
FT                   PGSLDSPVDISADSFDFFTDTLTTIDLQHLNY"
FT   misc_feature    384..401
FT                   /gene="Hox1.11"
FT                   /label=YPWMK_box
FT   misc_feature    513..692
FT                   /gene="Hox1.11"
FT                   /note="homeobox"
FT   polyA_signal    1222..1227
FT                   /gene="Hox1.11"
FT   polyA_site      1249
FT                   /gene="Hox1.11"
XX
SQ   Sequence 1249 BP; 317 A; 371 C; 303 G; 258 T; 0 other;
     ttttttcctt cgcgctcgcc tttttcctgg gccttgcccc cccaaagccc ctccaaaaga        60
     gggaactttt cctccgaggg ggctccaagg agaaggccat gaattacgaa tttgagcgag       120
     agattggttt tatcaatagc cagccgtcgc tcgctgagtg cctgacatct tttccccctg       180
     tcgctgatac atttcaaagt tcatcaatca agacctcgac gctttcacac tcgacactga       240
     ttcctcctcc ttttgagcag accattccca gcctgaaccc gggcagtcac cctcgccacg       300
     gcgctggcgt tggcggccgc cccaagtcga gccccgcggg cagtcgcggc agcccggtgc       360
     ctgccggcgc cctgcagccg cctgagtatc cctggatgaa ggagaagaag gcggccaaga       420
     aaaccgcgct gccgcccgcc gccgcctcca cgggccctgc ctgcctcggc cacaaagaat       480
     ccctggaaat agctgatggc agcggcgggg gatccaggcg tctgagaacc gcgtacacca       540
     acactcagct tttggagctg gaaaaggaat ttcatttcaa caagtacctt tgcagacccc       600
     gcagggtgga aatcgccgcg ctgctggatt tgaccgagag acaagtgaaa gtgtggtttc       660
     agaaccggag aatgaagcat aagaggcaaa cccagtgcaa ggagaaccaa aacagcgaag       720
     ggaaatttaa aaacctggag gactcggaca aagtggagga agacgaggaa gagaagtcac       780
     tctttgagca agccctcagt gtctccgggg cccttctgga gagggaaggg tacacttttc       840
     agcaaaatgc gctctctcaa cagcaggctc ccaatggaca caatggcgac tcccaaactt       900
     tcccagtttc gcctttaacc agcaatgaga aaaatttgaa acattttcag caccagtcac       960
     ccactgttcc taactgcttg tcaacaatgg gccagaactg tggagctggc ctaaacaatg      1020
     acagtcccga ggccatcgag gtcccctctt tgcaggactt caatgttttc tccacagatt      1080
     cctgcctgca gctttcagat gcactgtcgc ccagcttgcc tggctccctg gacagtcctg      1140
     tagatatctc agctgacagc tttgactttt ttacagacac actcaccaca atcgacctac      1200
     agcatctgaa ttactaagaa cattaaagca aaacaaagct tcacaaaac                  1249
//
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