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EBI DbfetchID M87501; SV 1; linear; genomic DNA; STD; PRO; 2662 BP. XX AC M87501; XX DT 31-MAR-1992 (Rel. 31, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 7) XX DE Nostoc sp. PCC 7120 PatA (patA) gene, complete cds. XX KW heterocyst pattern formation; PatA protein. XX OS Nostoc sp. PCC 7120 OC Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc. XX RN [1] RP 1-2662 RX DOI; 10.1073/pnas.89.12.5655 RX PUBMED; 1608976. RA Liang J., Scappino L., Haselkorn R.; RT "The patA gene product, which contains a region similar to CheY of RT Escherichia coli, controls heterocyst pattern formation in the RT cyanobacterium Anabaena 7120"; RL Proc. Natl. Acad. Sci. U.S.A. 89(12):5655-5659(1992). XX CC The C-terminal region of PatA (residues 256-379) is similar to CheY CC and other response regulators in two-component regulatory systems CC in eubacteria. XX FH Key Location/Qualifiers FH FT source 1..2662 FT /organism="Nostoc sp. PCC 7120" FT /strain="PCC 7120" FT /mol_type="genomic DNA" FT /tissue_lib="PCC 7120" FT /db_xref="taxon:103690" FT repeat_region 942..1218 FT /rpt_type=INVERTED FT /rpt_unit_range=1207..1218 FT /rpt_unit_range=942..953 FT repeat_region 988..1036 FT /rpt_type=INVERTED FT /rpt_unit_range=1021..1036 FT /rpt_unit_range=988..1003 FT gene 1195..2334 FT /gene="patA" FT CDS 1195..2334 FT /codon_start=1 FT /transl_table=11 FT /gene="patA" FT /product="PatA" FT /function="controls heterocyst pattern formation" FT /db_xref="GOA:P39048" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/Swiss-Prot:P39048" FT /protein_id="AAB59012.1" FT /translation="MKTLPITRYRFFQKIQPLSLLKKITGKTITGCLQVFSTSGTWSIY FT VEEGKLIYACYSERMFEPLYRHLGNLSPQIATLPKEINEQLRAIFETGIENQAIPNPDY FT LAICWLVNQKYISSSQAAVLIEQLALEVVESFLMLEEGSYEFIPESFLDDLPKFCYLNV FT RLLVEQCQQHGRVPEAFRREASSQEISSSTEHNQIPVNNRRSTKFTSPPHTQPKPEPRL FT PQINTNKSTEYSKRYASQPNTVNHGYSQTSATSTDKKIYTIFCIDENPIVLNNIKNFLD FT DQIFAVIGVTDSLKALMEILCTKPDIILINVDMPDLDGYELCSLLRKHSYFKNTPVIMV FT TEKAGLVDRARAKIVRASGHLTKPFNQGDLLKVIFKHIT" FT variation 1257..1264 FT /phenotype="terminal heterocyst only" FT /gene="patA" FT /standard_name="PAT-1" FT /replace="aaaaaaaaa" FT repeat_region 1645..2040 FT /rpt_type=DIRECT FT /rpt_unit_range=1645..1657 FT /rpt_unit_range=2029..2040 XX SQ Sequence 2662 BP; 875 A; 486 C; 465 G; 836 T; 0 other; gatcaggaca atttgccaac aaagcattta ccaatgtgcc atgagaatgt cctggtgcag 60 ggtggacgac taaaccagcc ggcttgttga gaatgagtaa ctggtcatct tcgtagagaa 120 tatctagggg aatatcttcg gcttgtattt ctaggggttg cgcttcggga acctctaaag 180 tgatgcgatc gcctactttc aggttaatct ttttagatgt acaaactttg ccattaactt 240 ggactttccc ctgttcaatt aactgctgaa tccgagaacg ggataaatct ggtaattctt 300 ctgcaaggta acggtcgatg cgtgcgctgt cttcttcaac ttctaagtaa aattcgttca 360 acattcagga ttggggacaa gtgaatcaat tcaatgctaa ataattataa aaatttggtt 420 tctcctgtac ggtttttaaa cctcaggata actaatgagt caatacgttt tcaaatatca 480 ttctgattct accgtcattc acatttcctt taagcattag ccataaagtt tatatattat 540 ttttatttgc ctagataaat tggagtaacc tagcttttag tgagccatta cttgcgtatc 600 taccgttggg aaaaaataga atttttatag tgaaaatctg ctattgacat tttgcaagtg 660 atggtcataa aaaatctggc aaacaacatc tctaaaatct caaacctggg taactactaa 720 atcaatactt acgtagtgag caaaagaact agtgtttttt aatttcaccg tatttaagtt 780 tgatatacct taattttacg ttatgcggta aaaacacaga taatactttt gctactgatg 840 ggtttgagcc aataactata cgtgtagtac ttaaggtact gttagattag ccaagttaat 900 gaaagataca gaaaagcaac ctgatttttg aaagaatgtt ttctagtaat cggttgaaca 960 atttttctgt ttgacatcat gaaactattc cactcaggag agtagcactg acggtgtaga 1020 actctcctga gtggaaagat tggcgtgaaa ataaaaaata aagactaact gtgttgactt 1080 aactgtaaat tgctgaactt aggtaaatat attctcagaa atacatttac ctacaggaaa 1140 agccttttcc ctaattttta ttttaaatct tgatttaata acagagcgat cgccatgaaa 1200 acacttccga ttactagata cagatttttt cagaaaatac aacccctatc gttattaaaa 1260 aaaataactg ggaagacaat cactggttgt ctacaagtat ttagtacttc aggtacctgg 1320 tctatatacg tagaagaggg taagctaatt tatgcctgtt attcagagag gatgtttgaa 1380 cctctttata gacatttggg aaatttaagc ccacaaattg caaccctacc taaagaaatt 1440 aacgagcagt taagagcaat ctttgaaaca ggaattgaaa atcaagcaat acccaatcct 1500 gattatttag ctatttgttg gttagtcaat cagaaatata ttagttcttc acaagcagct 1560 gttcttatag aacaattagc attagaagta gtagaatcat ttctcatgct ggaagaagga 1620 agttatgaat ttattcctga aagtttttta gatgatttgc ctaaattttg ctatctgaat 1680 gttcggttat tagtagaaca gtgtcaacag catgggcgtg ttccggaagc attccgcaga 1740 gaagcttcca gtcaagagat atcttcatct acagaacata accagatacc agttaacaac 1800 agacgtagca ccaaatttac atctcctcct catactcagc ctaagcctga gccacgctta 1860 ccgcaaataa atactaataa atctacagaa tattcaaagc gttacgcatc tcaacctaat 1920 actgtcaatc atggatactc acagacatct gccacatcta ctgataaaaa aatctataca 1980 atcttttgta ttgatgagaa tccaattgtg ctaaataata ttaaaaactt tttagatgat 2040 caaatatttg cagtaattgg tgttacagat tctctaaaag cattaatgga aattctctgt 2100 acaaagccag atatcatttt gatcaatgtt gatatgcctg atttagacgg ctatgagtta 2160 tgttctttat tacgcaaaca ttcatatttt aaaaacacac ctgtgattat ggtgacagaa 2220 aaagctggac tagttgatag agcgagagca aagatagtca gagcatcagg tcacttaact 2280 aaacctttta atcaaggtga tttgctaaaa gtaattttta aacacattac gtaatatcaa 2340 ctattaccaa ttacccatta ccttcttaga tgtagataca ttagcaagtc aattaacacg 2400 ggctgctaca gataaaatac tgtgcatatt gactacagag ccaatgactg cgatcgctgg 2460 cgcttcaaat cctgttttct ccactagttc tacaattgtc cctaattcgc caattaattc 2520 ttcctgttcg ggacgtgtac cccagcgcac tagagcgatt ggtgttgcta aactcaaacc 2580 agccattttc aactgttcca caatataagg tagattgtgg atacccatat aaatgacaat 2640 cgtttctgaa ccgtgggcga tc 2662 // |
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