 |
|
EBI DbfetchID M83774; SV 1; linear; genomic DNA; STD; PRO; 3369 BP. XX AC M83774; XX DT 27-JAN-1992 (Rel. 30, Created) DT 05-JUL-1999 (Rel. 60, Last updated, Version 6) XX DE Bacteroides fragilis levanase (scrL) gene, complete cds. XX KW levanase; scrL gene. XX OS Bacteroides fragilis OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; OC Bacteroides. XX RN [1] RP 1-3369 RX PUBMED; 8491724. RA Blatch G.L., Woods D.R.; RT "Molecular characterization of a fructanase produced by Bacteroides RT fragilis BF-1"; RL J. Bacteriol. 175(10):3058-3066(1993). XX FH Key Location/Qualifiers FH FT source 1..3369 FT /organism="Bacteroides fragilis" FT /strain="BF1" FT /mol_type="genomic DNA" FT /db_xref="taxon:817" FT CDS <1..1252 FT /codon_start=2 FT /transl_table=11 FT /note="ORF1" FT /db_xref="GOA:Q45154" FT /db_xref="InterPro:IPR000531" FT /db_xref="UniProtKB/TrEMBL:Q45154" FT /protein_id="AAA22923.1" FT /translation="DEFFATSELSRSYRNTTWRIGVNEWHYKVDYASNTTMYDHMVGEY FT PERLVREGNTDGVYYDFNKNASEYYKGHENKLAVYATHDWDISPKWNVYYGARLEWQHL FT EGENAAVYDAEGNAVGRFPDYYLGAVSDKGVRITPRLFDYDWMNMAFTAAATYKLTREF FT GFTADFTYNTQRPGLSNFAPATMPNTDKISVPLGRAGVYYNTDWISLTSLFSYISKTNN FT NSTLNLINPNDQTEILAAPLSYDIQTIGWTTDAVIKPFKGFNFHFLFTYQSPTYKKYET FT SVTFKDGTVGEIDATGNIVTEIPKVLVELDPSYNITNDLRVWASFRYFSKTYANIKNAY FT YFNGRWETFGGINWTVNKHLALSATVINFLNQTGAKGSIAGAELVDKKDAASYNGHWMA FT GSYIRPFTVELAASIRF" FT gene 1377..3245 FT /gene="scrL" FT CDS 1377..3245 FT /codon_start=1 FT /transl_table=11 FT /gene="scrL" FT /product="levanase" FT /db_xref="GOA:Q45155" FT /db_xref="InterPro:IPR001362" FT /db_xref="InterPro:IPR008985" FT /db_xref="InterPro:IPR013148" FT /db_xref="InterPro:IPR013189" FT /db_xref="UniProtKB/TrEMBL:Q45155" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA22924.1" FT /translation="MKTTFMNVSRGVIGALAFSLGISSCQSSQSKMTFEQEGDSLTVIH FT ITNPTQYLLLPVEEKTPEAQVCIASDSVPVDMDVRLSREKVDYFVPFALPKGEKEVAVR FT IRHLPKEALCWKELKLSDTFDTTNTDQYRPLYHHTPLYGWMNDANGLVYKDGEYHLFYQ FT YNPYGSMWGNMHWGHSVSKDLVHWEHLEPALARDTLGHIFSGSSVVDDANTAGYGAGAI FT VAFYTSASDKNGQIQCMAYSTDNGRTFTKYEKNPVLTPFDGLKDFRDPKVFWYAPDQKW FT VMVVSADKEMRFYSSENLKEWTYMSGWGEGYGVQPSQFECPDMVELPVDGNPDHKKWAL FT IVNVNPGCYFGGSATQYFIGDFDGEKFVCDNKPETVKWLDWGKDHYATVCFSNTGDRTI FT AVPWMSNWQYANIVPTRQFRSANALPRELSLYTQDGDIYMAAAPVEETKSLRKESREIP FT AFEVGDAYHVDSLLSDNKGAYEIELELAAGSAEIMGLKLFNEKGENVDIYISLPEKKLV FT MDRTKSGIVDFGKDSAPHAIEAHDRRKQNSINYVDDFALGTWAPVQKAGNYKLDIFVDK FT CSVEIFLNGGKIAMTNLIFPTTPYNQMSFYSRGGAFKVDRCKIYRL" XX SQ Sequence 3369 BP; 898 A; 745 C; 862 G; 864 T; 0 other; cgatgagttt ttcgctacct ccgaactctc ccgttcctat cgtaatacga cctggagaat 60 cggagtgaac gaatggcact ataaggtgga ttatgcttcg aatactacca tgtacgatca 120 tatggtaggg gagtatcccg aacgtctggt acgtgaaggg aatacagatg gtgtatatta 180 cgatttcaat aaaaatgctt cggaatatta taaaggacat gaaaacaaac tggctgttta 240 tgccactcac gattgggata tttcgcccaa gtggaacgtg tattatggcg cccgtctgga 300 atggcagcac ctggaaggtg aaaatgcggc tgtatacgat gccgaaggga atgccgtagg 360 ccgtttcccg gattattacc tgggagctgt gtccgataaa ggagtcagga tcactccccg 420 tcttttcgac tacgactgga tgaacatggc ctttactgcc gccgctactt ataagctgac 480 ccgtgaattt ggttttactg ccgatttcac ttacaacaca cagcgtcccg gcttgtcgaa 540 ctttgcaccg gccactatgc ccaataccga taaaatctct gttcccctgg gacgtgccgg 600 ggtctattat aacaccgatt ggatcagtct gacctctctg ttctcttata tctcgaagac 660 gaataacaac tcgacactga acctgattaa tccgaatgac cagactgaga ttctcgccgc 720 tccgttgagt tatgacatcc aaaccatcgg ctggacgacg gatgcagtga tcaagccgtt 780 taagggcttc aacttccact tcctgtttac ttatcaaagt ccgacttaca agaagtatga 840 aacgagtgtg acctttaaag acggtacggt gggggagatc gatgccacag ggaatattgt 900 gacggagatt ccgaaagtgc ttgtcgaact ggatcccagc tataacatca cgaatgatct 960 cagagtctgg gccagcttcc gctacttcag caagacgtat gccaacatta aaaatgctta 1020 ctatttcaac ggacgctggg aaaccttcgg aggtattaac tggacggtga acaagcatct 1080 tgcgttgagt gccacggtta tcaatttcct gaatcagacc ggggctaaag gaagcattgc 1140 cggtgccgaa ctggtggaca aaaaagatgc ggcatcttat aacggtcatt ggatggcggg 1200 cagttatatt cgtccgttta ccgtggagct ggctgccagt atccgcttct gacaggagtt 1260 tggtatcaat cgttatacaa tttgaaacaa aattaatagc cggtggcaga tatctccgct 1320 atatttgcca ccgtaaatac ggctattaca ttacttaata aaaataccat gttatcatga 1380 aaacaacttt tatgaatgta agtagaggag tgatcggtgc tttggctttc tctctcggaa 1440 tttcgtcttg ccaaagttca caaagtaaaa tgacatttga acaggaaggc gacagcctta 1500 cggtgattca tattacaaat cctacgcagt atttactttt gcccgtcgag gagaagactc 1560 ccgaagcaca ggtctgcatt gcttcggact cggttccggt agacatggac gtacgcctgt 1620 caagggagaa agtggactat tttgttccct ttgctttgcc taagggagag aaagaggtag 1680 ccgtgcgtat ccgtcacttg ccgaaggagg ctttgtgttg gaaagaactc aagctttcgg 1740 atacttttga cacgaccaat acagaccaat accgtccctt gtatcaccat actccgctct 1800 acggatggat gaacgatgcc aacggactgg tatataaaga tggtgagtat cacttgttct 1860 atcagtataa tccttacggc tcgatgtggg gcaacatgca ctggggacat tcggtgagca 1920 aggatctggt gcactgggaa catctggagc cggcacttgc ccgcgatacg ctgggacata 1980 ttttctccgg cagttcagta gtggatgatg ccaatacagc cggatatggg gcaggggcca 2040 tcgttgcctt ctacacttcg gccagtgata agaacgggca gatacaatgt atggcctata 2100 gcactgacaa cggacgtacg tttaccaaat atgaaaagaa tccggttctg actccgtttg 2160 acggactgaa agatttccgt gatccgaaag tattctggta tgctcccgat cagaagtggg 2220 tgatggtggt gtcggccgat aaagagatgc gtttctattc gtcggagaac ctgaaagaat 2280 ggacctatat gagcggttgg ggtgaaggtt acggggttca gcccagccag ttcgaatgcc 2340 cggatatggt agaacttccg gtagacggca acccggacca taaaaagtgg gcgctgatag 2400 ttaacgtgaa tccgggatgt tactttgggg gaagtgccac ccaatacttt atcggtgact 2460 ttgacggaga gaagtttgtt tgcgacaata agcccgaaac ggtgaaatgg ctcgactggg 2520 gaaaagatca ctatgcgacg gtctgcttct cgaatacggg tgaccgtacg attgcggttc 2580 cctggatgag caactggcaa tatgccaata tcgtgcctac ccgtcagttc cgcagtgcca 2640 atgcattgcc tcgcgaactg agcctttata cacaagatgg ggatatctat atggctgccg 2700 ccccggtgga agagaccaag tcattgcgta aagaatcccg ggagattccg gcttttgagg 2760 tgggggatgc ttatcatgtc gattcgttgt tgtccgataa taaaggggct tacgaaatag 2820 agttggaact ggcagccggc tctgccgaga ttatgggact gaagctgttc aatgaaaagg 2880 gggagaatgt ggatatctac atcagccttc cggagaaaaa gttggtgatg gaccgtacga 2940 agagcggcat cgtagacttc ggcaaagaca gtgccccgca tgccatcgag gcacacgatc 3000 gccggaaaca gaactctatt aattatgtag acgattttgc tttgggtacc tgggctccgg 3060 tgcagaaagc cggtaactat aaattggata tctttgtaga taaatgctcg gtagaaatct 3120 tcctgaacgg aggtaagatt gctatgacga acctgatatt ccctacaact ccttacaatc 3180 agatgagttt ctacagtcgt gggggagcct tcaaggtgga tcggtgcaag atatacaggt 3240 tgtagttcct ctatcgcctc ccgttgagac attcattaaa ttaacatatc atggaaaata 3300 ccaaaaacaa ctcttacatg aaactcatcc cggtgatgct ctgcttcttt gccatgggat 3360 tcgtagatc 3369 // |
|