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EBI DbfetchID M81223; SV 1; linear; genomic DNA; STD; VRL; 2298 BP. XX AC M81223; XX DT 27-FEB-1992 (Rel. 31, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Chicken anaemia agent DNA. XX KW . XX OS Chicken anemia virus OC Viruses; ssDNA viruses; Circoviridae; Gyrovirus. XX RN [1] RP 1-2298 RX DOI; 10.1007/BF01309811 RX PUBMED; 1605740. RA Meehan B.M., Todd D., Creelan J.L., Earle J.A., Hoey E.M., McNulty M.S.; RT "Characterization of viral DNAs from cells infected with chicken anaemia RT agent: sequence analysis of the cloned replicative form and transfection RT capabilities of cloned genome fragments"; RL Arch. Virol. 124(3-4):301-319(1992). XX FH Key Location/Qualifiers FH FT source 1..2298 FT /organism="Chicken anemia virus" FT /host="Gallus gallus" FT /isolate="German isolate Cuxhaven 1" FT /mol_type="genomic DNA" FT /db_xref="taxon:12618" FT misc_feature 21..26 FT /note="CACTAT motif" FT misc_feature 21..26 FT /note="onsensus sequemce of the core element of SV40 FT enhancer (GTGGTTA)" FT misc_feature 44..49 FT /note="Lymphoid-specific transcription factor" FT repeat_region 171..189 FT protein_bind 184..189 FT /bound_moiety="ATF" FT /bound_moiety="CRE" FT repeat_region 192..210 FT protein_bind 205..210 FT /bound_moiety="ATF" FT /bound_moiety="CRE" FT repeat_region 225..243 FT protein_bind 238..243 FT /bound_moiety="ATF" FT /bound_moiety="CRE" FT repeat_region 246..264 FT protein_bind 259..264 FT /bound_moiety="ATF" FT /bound_moiety="CRE" FT misc_feature 295..301 FT /note="c-fos transcription factor" FT protein_bind 311..316 FT /bound_moiety="Sp1" FT CDS 386..1036 FT /codon_start=1 FT /note="24 kDa ORF" FT /db_xref="GOA:P69484" FT /db_xref="InterPro:IPR006945" FT /db_xref="UniProtKB/Swiss-Prot:P69484" FT /protein_id="AAA42882.1" FT /translation="MHGNGGQPAAGGSESALSREGQPGPSGAAQGQVISNERSPRRYST FT RTINGVQATNKFTAVGNPSLQRDPDWYRWNYNHSIAVWLRECSRSHAKICNCGQFRKHW FT FQECAGLEDRSTQASLEEAILRPLRVQGKRAKRKLDYHYSQPTPNRKKVYKTVRWQDEL FT ADREADFTPSEEDGGTTSSDFDENINFDIGGDSGIVDELLGRPFTTPAPVRIV" FT CDS 492..857 FT /codon_start=1 FT /note="13 kDa ORF" FT /db_xref="GOA:Q99152" FT /db_xref="InterPro:IPR006858" FT /db_xref="UniProtKB/Swiss-Prot:Q99152" FT /protein_id="AAA42883.1" FT /translation="MNALQEDTPPGPSTVFRPPTSSRPLETPHCREIRIGIAGITITLS FT LCGCANARAPTLRSATADNSESTGSKNVPDLRTDQPKPPSKKRSCDPSEYRVSELKESL FT ITTTPSRPRTARRCIRL" FT CDS 859..2208 FT /codon_start=1 FT /note="52 kDa ORF" FT /db_xref="GOA:Q99153" FT /db_xref="InterPro:IPR007291" FT /db_xref="UniProtKB/Swiss-Prot:Q99153" FT /protein_id="AAA42884.1" FT /translation="MARRARRPRGRFYAFRRGRWHHLKRLRRKYKFRHRRRQRYRRRAF FT RKAFHNPRPGTYSVRLPNPQSTMTIRFQGVIFLTEGLILPKNSTAGGYADHMYGARVAK FT ISVNLKEFLLASMNLTYVSKIGGPIAGELIADGSKSQAADNWPNCWLPLDNNVPSATPS FT AWWRWALMMMQPTDSCRFFNHPKQMTLQDMGRMFGGWHLFRHIETRFQLLATKNEGSFS FT PVASLLSQGEYLTRRDDVKYSSDHQNRWQKGEQPMTGGIAYANGKMRPDEQQYPAMPPD FT PPIITATTAQGTQVRCMNSTQAWWSWDTYMSFATLTALGRQWSFPPGQRSVSRRSFNHH FT KARGAGDPKGQRWHTLVPLGTETITDSYMSAPASELDTNFFTLYVAQGTNKSQQYKFGT FT ATYALKEPVMKSDAWAVVRVQSVWQLGNRQRPYPWDVNWANSTMYWGTQP" FT misc_feature 2207..2221 FT /note="Polypurine motif" FT misc_feature 2212..2221 FT /note="Erythroid-specific G-string" FT misc_feature 2255..2265 FT /note="NF-kB and H2TF1-like transcription factor" FT polyA_signal 2293..2298 FT /note="52 kDa ORF associated" XX SQ Sequence 2298 BP; 589 A; 660 C; 635 G; 414 T; 0 other; cgcagaaaat agatttatcg cactatcgaa ttccgagtgg ttactattcc atcaccattc 60 tagcctgtac acagaaagtc aagatggacg aatcgctcga cttcgctcgc gattcgtcga 120 aggcgggggg ccggaggccc cccggtggcc cccctccaac gagtggagca cgtacagggg 180 ggtacgtcat ccgtacaggg gggtacgtca caaagaggcg ttcccgtaca ggggggtacg 240 tcacgcgtac aggggggtac gtcacagcca atcaaaagct gccacgttgc gaaagtgacg 300 tttcgaaaat gggcggcgca agcctctcta tatattgagc gcacataccg gtcggcagta 360 ggtatacgca aggcggtccg ggtggatgca cgggaacggc ggacaaccgg ccgctggggg 420 cagtgaatcg gcgcttagcc gagaggggca acctgggccc agcggagccg cgcaggggca 480 agtaatttca aatgaacgct ctccaagaag atactccacc cggaccatca acggtgttca 540 ggccaccaac aagttcacgg ccgttggaaa cccctcactg cagagagatc cggattggta 600 tcgctggaat tacaatcact ctatcgctgt gtggctgcgc gaatgctcgc gctcccacgc 660 taagatctgc aactgcggac aattcagaaa gcactggttc caagaatgtg ccggacttga 720 ggaccgatca acccaagcct ccctcgaaga agcgatcctg cgacccctcc gagtacaggg 780 taagcgagct aaaagaaagc ttgattacca ctactcccag ccgaccccga accgcaagaa 840 ggtgtataag actgtaagat ggcaagacga gctcgcagac cgagaggccg attttacgcc 900 ttcagaagag gacggtggca ccacctcaag cgacttcgac gaaaatataa atttcgacat 960 cggaggagac agcggtatcg tagacgagct tttaggaagg cctttcacaa cccccgcccc 1020 ggtacgtata gtgtgaggct gccgaacccc caatctacta tgactatccg cttccaaggg 1080 gtcatctttc tcacggaagg actcattctg cctaaaaaca gcacagcggg gggctatgca 1140 gaccacatgt acggggcgag agtcgccaag atctctgtga acctgaaaga gttcctgcta 1200 gcctcaatga acctgacata cgtgagcaaa atcggaggcc ccatcgccgg tgagttgatt 1260 gcggacgggt ctaaatcaca agccgcggac aattggccta attgctggct gccgctagat 1320 aataacgtgc cctccgctac accatcggca tggtggagat gggccttaat gatgatgcag 1380 cccacggact cttgccggtt ctttaatcac ccaaagcaga tgaccctgca agacatgggt 1440 cgcatgtttg ggggctggca cctgttccga cacattgaaa cccgctttca gctccttgcc 1500 actaagaatg agggatcctt cagccccgtg gcgagtcttc tctcccaggg agagtacctc 1560 acgcgtcggg acgatgttaa gtacagcagc gatcaccaga accggtggca aaaaggcgaa 1620 caaccgatga cggggggcat tgcttatgcg aacgggaaaa tgagacccga cgagcaacag 1680 taccctgcta tgcccccaga ccccccgatc atcaccgcta ctacagcgca aggcacgcaa 1740 gtccgctgca tgaatagcac gcaagcttgg tggtcatggg acacatatat gagctttgca 1800 acactcacag cactcggtcg acaatggtct tttcctccag ggcaacgttc agtttctaga 1860 cggtccttca accaccacaa ggcgagagga gccggggacc ccaagggcca gagatggcac 1920 acgctggtgc cgctcggcac ggagaccatc accgacagct acatgtcagc acccgcatca 1980 gagctggaca ctaatttctt tacgctttac gtagcgcaag gcacaaataa gtcgcaacag 2040 tacaagttcg gcacagctac atacgcgcta aaggagccgg taatgaagag cgatgcatgg 2100 gcagtggtac gcgtccagtc ggtctggcag ctgggtaaca ggcagaggcc atacccatgg 2160 gacgtcaact gggcgaacag caccatgtac tgggggacgc agccctgaaa aggggggggg 2220 gctaaagccc ccccccctta aacccccccc tgggggggat tcccccccag accccccctt 2280 tatatagcac tcaataaa 2298 // |
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