 |
|
EBI DbfetchID M80477; SV 1; linear; genomic DNA; STD; PRO; 3677 BP. XX AC M80477; XX DT 11-DEC-1991 (Rel. 30, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 10) XX DE Pseudomonas syringae syringae putative regulatory protein (lemA) gene, DE complete cds, and O-acetylserine (thiol)-lyase B (cysM) gene, 5' end. XX KW cysM gene; lemA gene; O-acetylserine (thiol)-lyase B; regulatory protein. XX OS Pseudomonas syringae OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RP 1-3677 RX PUBMED; 1314807. RA Hrabak E.M., Willis D.K.; RT "The lemA gene required for pathogenicity of Pseudomonas syringae pv. RT syringae on bean is a member of a family of two-component regulators"; RL J. Bacteriol. 174(9):3011-3020(1992). XX FH Key Location/Qualifiers FH FT source 1..3677 FT /organism="Pseudomonas syringae" FT /mol_type="genomic DNA" FT /db_xref="taxon:317" FT CDS complement(<1..507) FT /codon_start=1 FT /transl_table=11 FT /gene="cysM" FT /product="O-acetylserine (thiol)-lyase B" FT /note="putative" FT /db_xref="GOA:P48028" FT /db_xref="InterPro:IPR001216" FT /db_xref="InterPro:IPR001926" FT /db_xref="UniProtKB/Swiss-Prot:P48028" FT /protein_id="AAA25876.1" FT /translation="MTLQYQTIADCVGNTPLVRLQRMAGNTSNTLLLKLEGNNPAGSVK FT DRPALSMITRAELRGQIHPGDTLIEATSGNTGIALAMAAAIKGYRMILIMPDNSSAERK FT AAMTAYGAELISVSKDDGMEGARDLAERMQAEGRGKVLDQFANGDNPEAHYTSTGPEIW FT RQTGGT" FT CDS 788..3511 FT /codon_start=1 FT /transl_table=11 FT /gene="lemA" FT /product="regulatory protein" FT /note="putative" FT /db_xref="GOA:P48027" FT /db_xref="InterPro:IPR001789" FT /db_xref="InterPro:IPR003594" FT /db_xref="InterPro:IPR003660" FT /db_xref="InterPro:IPR003661" FT /db_xref="InterPro:IPR004358" FT /db_xref="InterPro:IPR005467" FT /db_xref="InterPro:IPR008207" FT /db_xref="InterPro:IPR009082" FT /db_xref="InterPro:IPR011006" FT /db_xref="UniProtKB/Swiss-Prot:P48027" FT /protein_id="AAA25877.1" FT /translation="MLLLTILPASLMAAMLGGYFTWMQLSELQSQLLQRGEMIAQDLAP FT LAANALGRKDKVLLSRIATQTLEQTDVRAVSFLDTDRTVLAHAGPTMISPSPIGSGSQL FT LSSTGTDATRYLLPVFGSQRHLTSPIIPAEADTLLGWVELEISHNGTLLRGYRSLFASL FT LLILTGLAFTATLAVRMSRTINGPMSQIKQAVSQLKDGNLETRLPPLGSRELDELASGI FT NRMAATLQNAQEELQLSIDQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLAN FT MSHEIRTPLNGILGFTHLLQKSELTPRQFDYLGTIEKSADNLLSIINEILDFSKIEAGK FT LVLDNIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLALSGDPLRLRQILTNLV FT SNAIKFTREGTIVARAMLEDETEEHAQLRISVQDTGIGLSSQDVRALFQAFSQADNSLS FT RQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWISLKLPKAREDKEESLNIPLGG FT LRAAVLEHHDLARQALEHQLEDCGLQTIVFNNLENLLNGVTAAHETPAAIDLAVLGVTA FT LEISPERLRQHIWDLENLNCKVMVLCPTTEHALFQLAVHDVYTQLQAKPACTRKLQKAL FT SELIAPRAVRADIGPPLSSRAPRVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVN FT AVQQEAFDLVLMDVQMPGMDGRQATEAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQ FT SGMDDYLTKPISERQLAQVVLKWTGLALRNPAPERQNEALEVHVGPLVLDHEEGLRLAA FT GKADLAADMLAMLLASLDADREAIRVARANQDVHALIERIHRLHGATRYCGVPQLRSAC FT QRAETLLKQNAPHTEEALNDLDKAIIRLEAEARVMA" XX SQ Sequence 3677 BP; 756 A; 1173 C; 1110 G; 638 T; 0 other; ggtaccgccc gtctgccgcc agatttccgg accggtggac gtgtaatgcg cctcggggtt 60 gtcgccattg gcaaactgat cgagcacctt gccacggcct tcggcctgca tgcgctcggc 120 cagatcacgg gcaccttcca tgccgtcatc cttgctgacc gaaatcagct cggcgccata 180 ggcggtcatc gcggccttgc gttcggcact ggagttgtcc ggcatgatca gaatcatccg 240 gtagcccttg atcgccgcag ccatggccag cgcgattccg gtattgccgg aggtggcttc 300 gatcagcgtg tcacccggat ggatctggcc gcgcaactcg gcgcgggtga tcatcgacaa 360 ggccgggcgg tcttttaccg agccagcggg gttgttacct tcgagtttca acaggagggt 420 attgctggta ttacccgcca tgcgttgcag acgcaccagc ggggtgttgc cgacgcaatc 480 ggcaatggtt tgatactgca gggtcatggc gtcttcgcaa tccagactgc ggggggtgcc 540 tatcataacg gcaaacggcc aaagcccata tcacgcaaag tgcgctgctt attcccaaaa 600 agaataacca ccgatttttc cgctgccacc ccgccctgca tagagagtta ggtgcccatg 660 ccgacggtaa atggctaaac tcatcccctt gtgccgatac agcaaggcag ccgatgcctg 720 atatcgacgg actgatacgt gttgccggag gaagagcgtg ctgaccaagc tgggtataaa 780 aggccgtgtg ctgctactga ctattttgcc tgccagcctg atggcggcga tgctcggtgg 840 ctatttcacc tggatgcagt tgagcgaact gcaaagccag ctgctgcaac gcggcgaaat 900 gatcgcccag gatctggcgc cccttgccgc caatgcactg gggcgcaagg acaaagtact 960 gctcagtcgc atcgccaccc agacgctgga acagaccgac gtgcgcgccg tgtcgtttct 1020 cgacaccgat cgcacggtac tggcccacgc cgggccgacc atgatcagcc cgtcgccgat 1080 tggcagcggg tcgcagttgc tcagctcgac cggcaccgac gccacgcgct acctgctgcc 1140 ggtattcggc agtcaacgcc acctgaccag cccgatcatt cctgccgaag ccgacaccct 1200 gctgggctgg gtcgagcttg aaatatccca taacggtacg ctgctgcgcg gctaccgaag 1260 cctgtttgcc agcctgctgc tgatcctcac cgggctggcg ttcaccgcaa ccctcgcggt 1320 acgcatgagc cgcaccatca acgggccgat gagccagatc aagcaggccg tgtcgcaact 1380 caaggacggc aatctggaaa cccgtctgcc accgctgggc agccgcgagc tggacgaact 1440 ggcgtcgggc atcaaccgca tggcggcgac gctgcagaac gcgcaggaag aactgcaact 1500 gagcatcgat caggcgaccg aggatgtccg gcagaatctg gagaccatcg aaatccagaa 1560 catcgaactg gacctggccc gtaaggaagc gcttgaagca agccggatca agtccgaatt 1620 cctggccaac atgagccatg aaatccgcac gccgctcaat ggcattctgg gcttcaccca 1680 tttgctgcag aaaagcgaac tgacgccgcg ccagttcgac tacctgggca ccatcgagaa 1740 gtccgccgac aacctgttga gcatcatcaa cgagattctc gacttctcga agatcgaggc 1800 cggcaagctg gtgctcgaca atatcccgtt caacctgcgc gacctgttgc aggacaccct 1860 gaccatcctc gccccggcgg cgcacgccaa acagctggaa ctggtcagtc tggtgtaccg 1920 cgatacgcca ctggcgctgt ccggcgaccc gctgcgtctg cggcagatcc tgaccaatct 1980 ggtcagcaac gcgatcaagt tcacccgcga aggcacgatc gtcgcgcgcg ccatgctcga 2040 agatgaaacc gaagagcacg cgcaactgcg catcagcgtg caggacaccg ggatcggcct 2100 gtccagtcag gatgtgcgag cgctgttcca ggccttcagc caggccgaca actcgctctc 2160 gcgccaaccg ggcggtaccg gactgggtct ggtgatctcc aagcgcctga tcgaacagat 2220 gggcggtgaa atcggtgtcg acagcacacc gggcgaaggt tcggaattct ggatcagcct 2280 gaaactgccc aaggcccgcg aagacaagga agaatcactc aatattccgc tcggcggcct 2340 gcgcgccgca gtgcttgaac atcatgacct ggcgcgtcag gcgctggagc atcaactgga 2400 agactgcggc ctgcagacca tcgtgttcaa taacctggag aacctgctca acggcgtgac 2460 cgcagcgcac gagacgccag cggccatcga tctggcggta cttggcgtga cggcgctgga 2520 aatctctccg gaacggttgc gccagcacat ctgggacctg gaaaacctca attgcaaggt 2580 catggtgctg tgcccgacca ccgagcacgc gctgttccag ttggcggtcc acgatgtcta 2640 cacgcaactg caggccaagc ccgcctgcac gcgcaaactg caaaaagccc tgtccgagct 2700 gatcgcgccg cgagcggtgc gtgccgacat cggcccgcca ttgtcgagcc gtgcaccgcg 2760 agtgctgtgt gtggacgaca acccggccaa cctgctgctg gtgcagaccc tgctcgaaga 2820 catgggcgct gaagtggtcg ctgtcgaggg cggctacgca gcggtcaatg ccgtgcaaca 2880 ggaagcgttc gacctggtgt tgatggacgt gcagatgccc ggcatggacg gtcggcaggc 2940 taccgaggcg atccgcgcct gggaggccga acgcaaccag agctcgctgc cgatcgtggc 3000 cctcaccgcg catgcgatgg ccaatgaaaa acgctcactg ctgcaaagcg gtatggacga 3060 ctacctgacc aagccgatca gcgaacggca gctggcgcag gtggtgctca agtggaccgg 3120 gctggcgctg cgcaaccctg cgccggaacg ccagaatgaa gcgctcgagg tgcacgtcgg 3180 gccgctggtg ctggatcatg aagaagggtt gcgcctggct gcgggcaagg cggatctcgc 3240 cgccgacatg ctggccatgc tgctggcctc cctggacgct gaccgcgaag ccattcgtgt 3300 ggcgcgtgcc aaccaggatg tacacgcctt gatcgaacgc atccaccgtc tgcacggcgc 3360 aacgcgttat tgcggcgttc cccagctgcg cagtgcctgc caacgcgccg aaaccctgct 3420 caagcagaac gccccgcaca ccgaagaggc ccttaacgat ctggacaagg ccatcattcg 3480 cctggaagcc gaggcgcggg tcatggcttg agcgtgcggc gcgacacctt tcgtgcctga 3540 cgctccagcg tgggcggagc atgttaggat gcgcgcaatt ttggaggacc catggtcgaa 3600 cacgattttc gctacagcat gctcaacccc cagcacacac tgaccgaatg ccgcaccgtg 3660 gcgcccggtc gctacca 3677 // |
|