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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M77808; SV 1; linear; genomic DNA; STD; PRO; 1647 BP.
XX
AC   M77808;
XX
DT   28-JUL-1992 (Rel. 32, Created)
DT   05-JUL-1999 (Rel. 60, Last updated, Version 4)
XX
DE   Erwinia chrysanthemi pectate lyase a (pelA) gene, complete cds.
XX
KW   pectate lyase a.
XX
OS   Erwinia chrysanthemi
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Dickeya.
XX
RN   [1]
RX   PUBMED; 3042750.
RA   Tamaki S.J., Gold S., Robeson M., Manulis S., Keen N.T.;
RT   "Structure and organization of the pel genes from Erwinia chrysanthemi
RT   EC16";
RL   J. Bacteriol. 170(8):3468-3478(1988).
XX
RN   [2]
RP   1-1647
RX   PUBMED; 1593262.
RA   Favey S., Bourson C., Bertheau Y., Kotoujansky A., Boccara M.;
RT   "Purification of the acidic pectate lyase and nucleotide sequence of the
RT   corresponding gene (pelA) of Erwinia chrysanthemi strain 3937";
RL   J. Gen. Microbiol. 138(3):499-508(1992).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1647
FT                   /organism="Erwinia chrysanthemi"
FT                   /map="10 minutes"
FT                   /strain="3937"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:556"
FT   protein_bind    3..29
FT                   /gene="pelA"
FT                   /bound_moiety="KdgR"
FT   gene            3..1466
FT                   /gene="pelA"
FT   protein_bind    190..216
FT                   /gene="pelA"
FT                   /bound_moiety="KdgR"
FT   sig_peptide     244..336
FT                   /gene="pelA"
FT   CDS             244..1422
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pelA"
FT                   /product="pectate lyase A"
FT                   /EC_number="4.2.2.2"
FT                   /db_xref="GOA:P0C1A3"
FT                   /db_xref="InterPro:IPR002022"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0C1A3"
FT                   /protein_id="AAA24846.1"
FT                   /translation="MNKVSGRSFTRTSTCLLATLIAGVMTSGVSAAELVNSKALESAPA
FT                   AGWASQNGSTTGGAAATSDNIYVVTNISEFTSALSAGAVAKIIQITGTVDISGGTPYKD
FT                   FADQKARSQINIPANTTVIGIGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPH
FT                   YEKGDGWNAEWDGMNITNGAHHVWVDHVTISDGSFTDDMYTTKDGETYVQHDGALDIKR
FT                   GSDYVTISNSLFDQHDKTMLIGHSDTNSAQDKGKLHVTLFNNVFNRVTERAPRVRYGSI
FT                   HSFNNVFNGDVKDPVYRYLYSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIF
FT                   SDNGSVLNGSAADLSGCGFSAYTSAIPYVYAVQPMTTELAQSITDHAGSGKL"
FT   terminator      1443..1466
FT                   /gene="pelA"
XX
SQ   Sequence 1647 BP; 461 A; 464 C; 354 G; 368 T; 0 other;
     gttacattta aaacatcgtt tcattatcat caaatattga aaaacaaata aatagatcgt        60
     attcattggc ggcccttaag tggcggcatc gccgaaactt caatattaat aataaaacat       120
     tattgatagg tgatgaggcg tatggcaggc agccatgaga ggacgataaa taaaaaataa       180
     cccatcgata tatatggaaa ttatttttaa caatcaacaa aggattttag taaggaaaat       240
     acgatgaaca aagtatcagg acgttctttt acccgcacct caacctgtct gctggctaca       300
     ttgatcgctg gcgtgatgac ctctggcgtt tccgctgccg aactggttaa cagcaaagcg       360
     ctggaatctg cgcccgccgc cggctgggcg tcacaaaacg gctccaccac cggcggtgcc       420
     gctgcaacca gcgataatat ctacgtcgtt accaatatca gtgaattcac cagcgcgctc       480
     agcgccggcg ccgtcgcaaa aatcatccag atcacaggca cggtcgatat cagcggcggc       540
     acgccctaca aagatttcgc tgatcagaaa gcccgcagcc agatcaacat tccggctaac       600
     accaccgtga tcgggattgg caccgacgcc aaattcatca acggctctct gattatcgac       660
     ggtaccgacg gcaccaataa cgtcatcatc cgcaacgtct acatccaaac gccaattgac       720
     gtagaaccgc attacgaaaa aggcgacggc tggaacgccg aatgggacgg catgaacatc       780
     accaacggtg cccatcatgt atgggtcgac cacgtcacca tcagcgacgg cagcttcacc       840
     gatgacatgt acaccaccaa agacggcgaa acttatgtcc agcacgatgg cgcactggat       900
     atcaaacgcg gttccgacta cgtgaccatc tccaacagcc tgttcgatca gcacgacaaa       960
     accatgctga ttggtcacag cgacaccaac tccgctcagg ataaaggtaa gctgcacgtc      1020
     acgctgttca acaacgtgtt taaccgcgta accgagcgcg cgccgcgcgt acgctacggc      1080
     agcatccaca gcttcaacaa cgtcttcaac ggtgatgtaa aagatccggt ataccgttac      1140
     ctgtacagct tcggtatcgg caccagcggc agcgtactgt ctgaaggcaa cagcttcacc      1200
     atcgccaatt tgagcgccag caaagcgtgc aaggttgtga agaaattcaa cggctccatt      1260
     ttctccgaca atggttccgt cctgaatggc agcgccgccg atctgtccgg ttgtggtttc      1320
     agcgcttaca ccagcgcgat tccttacgtt tacgccgttc agccgatgac taccgaactg      1380
     gcgcaatcca ttacggacca cgcaggttca ggcaagctgt aatttcccgt tcttttgttc      1440
     ccaacggctg cccacgggcg gccgttttta cgtctagccc acaccgtcat ccgcccgact      1500
     cgtccccttt cttcgtgcca atttcgtact cattcttatt aatttattac taattttcgc      1560
     attaacaccg ccagtcaaaa acagcagaat taattaacta tcaccgttcc aatcatcgaa      1620
     attaaaaata taaataattg atttaaa                                          1647
//
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