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EBI DbfetchID M73789; SV 1; linear; genomic DNA; STD; PRO; 3060 BP. XX AC M73789; XX DT 24-OCT-1991 (Rel. 29, Created) DT 09-SEP-2004 (Rel. 81, Last updated, Version 6) XX DE Streptomyces rubiginosus xylose kinase and xylose isomerase genes, complete DE cds. XX KW xylose isomerase; xylulose kinase. XX OS Streptomyces rubiginosus OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Streptomycineae; Streptomycetaceae; Streptomyces. XX RN [1] RP 1-3060 RX PUBMED; 1657868. RA Wong H.C., Ting Y., Lin H.-C., Reichert F., Myambo K., Watt K., Toy P.L., RA Drummond R.J.; RT "Genetic organization and regulation of the xylose degradation genes in RT Streptomyces rubiginosus"; RL J. Bacteriol. 173(21):6849-6858(1991). XX FH Key Location/Qualifiers FH FT source 1..3060 FT /organism="Streptomyces rubiginosus" FT /mol_type="genomic DNA" FT /db_xref="taxon:1929" FT mRNA complement(88..1659) FT /gene="xylB" FT /product="xylulose kinase" FT /note="one of two possible transcripts of the XylB gene" FT mRNA complement(88..1605) FT /gene="xylB" FT /product="xylulose kinase" FT /note="one of two possible transcripts of the XylB gene" FT terminator complement(88..126) FT /gene="xylB" FT CDS complement(139..1584) FT /codon_start=1 FT /transl_table=11 FT /gene="xylB" FT /product="xylulose kinase" FT /db_xref="GOA:P27156" FT /db_xref="InterPro:IPR000577" FT /db_xref="InterPro:IPR006000" FT /db_xref="InterPro:IPR018483" FT /db_xref="InterPro:IPR018484" FT /db_xref="InterPro:IPR018485" FT /db_xref="UniProtKB/Swiss-Prot:P27156" FT /protein_id="AAA26837.1" FT /translation="MSAAEGPLVVGVDTSTQSTKALVVDVATGRVVASGQAPHTVTSGA FT GRESDPRQWWDALCEALRQCGEAAHEAAAVSIGGQQHGLVTLDGHGEPVRPALLWNDVR FT SAPQGHRLIEELGGAKFWAERTGSVPAASFTVTKWAWLAEHEPEAVRATRAVRLPHDYL FT TERLTGQGTTDRGDASGTGWWASGTEAYDEEILGHVGLDPALLPRVVRPGEVAGTVRDS FT HELPFSKGTLVACGTGDNAAAALGLGVRPGTPVMSLGTSGTVYAVTQRRPADPTGTVAG FT FADARGDWLPLACTLNCTLAVDRVAALLGLDREAVEPGHGVTLLPFLDGERTPNLPRSS FT GLLHGLRHDTTGGQLLQAAYDGAVYSLLAALDLVLDEDADPSAPLLLIGGGARGTAWQQ FT TVRRLSGRAVQVPRAAELVALGAAAQAAGLLTGEDPAAVARRWETAAGPVLEAVERDEE FT TLDRLAGVLSDAAPLLERGTGAG" FT mRNA 1625..2919 FT /gene="xylA" FT /product="xylose isomerase" FT CDS 1699..2865 FT /codon_start=1 FT /transl_table=11 FT /gene="xylA" FT /product="xylose isomerase" FT /db_xref="GOA:P24300" FT /db_xref="InterPro:IPR001998" FT /db_xref="InterPro:IPR012307" FT /db_xref="InterPro:IPR013022" FT /db_xref="InterPro:IPR013453" FT /db_xref="PDB:1GW9" FT /db_xref="PDB:1MNZ" FT /db_xref="PDB:1O1H" FT /db_xref="PDB:1OAD" FT /db_xref="PDB:1XIB" FT /db_xref="PDB:1XIC" FT /db_xref="PDB:1XID" FT /db_xref="PDB:1XIE" FT /db_xref="PDB:1XIF" FT /db_xref="PDB:1XIG" FT /db_xref="PDB:1XIH" FT /db_xref="PDB:1XII" FT /db_xref="PDB:1XIJ" FT /db_xref="PDB:1XIS" FT /db_xref="PDB:2G4J" FT /db_xref="PDB:2GLK" FT /db_xref="PDB:2GUB" FT /db_xref="PDB:2GVE" FT /db_xref="PDB:2XIS" FT /db_xref="PDB:3CWH" FT /db_xref="PDB:3XIS" FT /db_xref="PDB:4XIS" FT /db_xref="PDB:8XIA" FT /db_xref="PDB:9XIA" FT /db_xref="UniProtKB/Swiss-Prot:P24300" FT /protein_id="AAA26838.1" FT /translation="MNYQPTPEDRFTFGLWTVGWQGRDPFGDATRRALDPVESVRRLAE FT LGAHGVTFHDDDLIPFGSSDSEREEHVKRFRQALDDTGMKVPMATTNLFTHPVFKDGGF FT TANDRDVRRYALRKTIRNIDLAVELGAETYVAWGGREGAESGGAKDVRDALDRMKEAFD FT LLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFIERLERPELYGVNPEVGHEQ FT MAGLNFPHGIAQALWAGKLFHIDLNGQNGIKYDQDLRFGAGDLRAAFWLVDLLESAGYS FT GPRHFDFKPPRTEDFDGVWASAAGCMRNYLILKERAAAFRADPEVQEALRASRLDELAR FT PTAADGLQALLDDRSAFEEFDVDAAAARGMAFERLDQLAMDHLLGARG" FT terminator 2879..2919 FT /gene="xylA" XX SQ Sequence 3060 BP; 393 A; 1155 C; 1108 G; 404 T; 0 other; gtgcgctcat tcctccgtcg ttcctcggtc tccgcggtcg tcctggtgcc gtccgccggc 60 tcggtgccgg cggtccgtgc gtgccgtgcc cgggcggcgg acgccgccgg cgtcccctgc 120 ccgggccgtc ccgcgtcgtc agccggcgcc cgtgccgcgc tccagcagcg gggccgcgtc 180 ggagagtacc ccggccagcc tgtccagcgt ctcctcgtcc cgctccacgg cctccagcac 240 cgggccggcc gccgtctccc agcggcgggc gaccgcggcg gggtcctccc cggtgagcag 300 cccggcagcc tgcgccgccg cgccgagcgc gaccagttcg gcggcccggg gcacctgcac 360 ggcccgcccc gacagccgcc gcacggtctg ctgccaggcc gtgccccggg cgccgccgcc 420 gatcagcagc aggggcgccg acgggtcggc gtcctcgtcg aggacgaggt ccagcgcggc 480 cagcagggag tacacggcgc cgtcgtaggc ggcctgcagc agctggccgc cggtggtgtc 540 gtggcgcagc ccgtgcagca ggccggagga gcgggggagg ttcggggtgc gttcgccgtc 600 caggaagggc agcagggtca cgccgtggcc gggttccacg gcctcccggt ccaggcccag 660 cagggcggcg acccggtcca cggccagcgt gcagttgagc gtgcaggcca gcggcagcca 720 gtcgccgcgc gcgtcggcga agcccgccac cgtgccggtc gggtcggcag gcctgcgctg 780 cgtcaccgcg tacaccgtgc cggaggtgcc gaggctcatc accggcgtgc ccggacgcac 840 cccgaggccc agcgcggcgg cggcgttgtc gccggtgccg cacgccacca gggtcccctt 900 ggagaaaggc agttcatggc tgtcgcggac ggtcccggcc acctcgccgg gacgcaccac 960 gcggggcagc agcgccgggt cgaggcccac gtgcccgagg atctcctcgt cgtacgcctc 1020 cgtgcccgag gcccaccagc cggtgccgga ggcgtcaccg cggtcggtcg tgccctgccc 1080 ggtgagccgc tcggtgaggt agtcgtgggg gaggcgcacc gcccgggtgg cgcgcaccgc 1140 ctccggctcg tgctccgcca gccaggccca cttggtgacc gtgaaggagg cggccggcac 1200 gcttccggtg cgctcggccc agaacttcgc gccgcccagc tcctcgatca gcctgtggcc 1260 ctgcggcgcg gagcggacgt cgttccacag cagcgccggg cggaccggtt ccccgtgtcc 1320 gtccagggtg accaggccgt gctgctgccc gccgatcgac accgcggcgg cctcgtgcgc 1380 ggcctcgccg cactggcgca gcgcctcgca cagggcgtcc caccactgac ggggatcact 1440 ctcccggccc gcccccgagg tcaccgtgtg cggtgcctgg ccgctcgcga cgacccggcc 1500 ggtggccacg tcgacgacca gtgccttggt ggactgggtg gatgtgtcca cgccgacgac 1560 gagcggaccc tcggctgctg acatcggttt ctccctcttc cgcggctcag cggggtgtgt 1620 ctcttcccag aagtgctcct gcatactaat ttgtaaacgg ccatgacgaa atagcctcag 1680 cgagcaagga gccgcggcat gaactaccag cccacccccg aggacaggtt caccttcgga 1740 ctgtggaccg tcggctggca gggacgggac cccttcggtg acgccacgcg gcgcgccctc 1800 gacccggtcg agtcggtgcg gcggctggcc gagctgggcg cccacggcgt cacgttccac 1860 gacgacgacc tcatcccctt cggctccagc gacagcgagc gcgaggagca cgtcaagcgg 1920 ttccggcagg cgctggacga caccggcatg aaggtgccga tggccaccac caacctgttc 1980 acccacccgg tgttcaagga cggcggcttc accgccaacg accgcgacgt gcgccgctac 2040 gccctgcgca agaccatccg caacatcgac ctcgcggtcg agctcggcgc cgagacctat 2100 gtggcctggg gcggccgcga gggtgccgag tcgggtggcg ccaaggacgt gcgggacgcc 2160 ctcgaccgca tgaaggaggc cttcgacctg ctcggcgagt acgtcacctc ccagggctac 2220 gacatccgct tcgccatcga gcccaagccg aacgagccgc gcggcgacat cctgctcccc 2280 accgtcggcc acgccctggc gttcatcgag cgcctggagc gaccggagct gtacggcgtg 2340 aaccccgagg tcggccacga gcagatggcc gggctgaact tcccgcacgg catcgcgcag 2400 gcgctgtggg cgggcaagct gttccacatc gacctcaacg gccagaacgg catcaagtac 2460 gaccaggacc tccgcttcgg cgcgggcgac ctgcgggccg cgttctggct ggtggacctg 2520 ctggagtcgg ccggctacag cggcccgcgg cacttcgact tcaagccgcc gcggaccgag 2580 gacttcgacg gggtgtgggc ctcggcggcc ggctgcatgc gcaactacct gatcctcaag 2640 gagcgtgcgg cggccttccg cgccgacccc gaggtgcagg aggcgctgcg cgcgtcccgt 2700 ctggacgagc tggcccggcc cacggcggcc gacggtctgc aggccctgct cgacgaccgg 2760 tccgccttcg aggagttcga cgtcgacgcg gcggcggccc gtgggatggc cttcgagcgc 2820 ctggaccagc tggcgatgga ccacctgctg ggcgcccggg gctgaaaccg ggcggcagga 2880 ccgggccggc cgtggggcga tcccgcggcg ggcccggtcg gcggcggtcc ggtccgcacg 2940 gggtacgccg gaatcatggc gcgggtgccc tgactccgta tcaacttcag tgccgcgtcc 3000 tgacggccgg tgcgcgcggg cagcatggtc gatgcagcac cgtacgcccg gccgcgagcc 3060 // |
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