 |
|
EBI DbfetchID M73770; SV 1; linear; genomic DNA; STD; INV; 7720 BP. XX AC M73770; M37820; XX DT 13-JUL-1991 (Rel. 28, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE P.falciparum RNA polymerase III largest subunit gene, complete cds. XX KW RNA polymerase III largest subunit. XX OS Plasmodium falciparum (malaria parasite P. falciparum) OC Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; OC Plasmodium (Laverania). XX RN [1] RP 1-7720 RX DOI; 10.1016/0166-6851(91)90047-A RX PUBMED; 1656254. RA Li W.-B., Bzik D.J., Tanaka M., Gu H., Fox B.A., Inselburg J.; RT "Characterization of the gene encoding the largest subunit of Plasmodium RT falciparum RNA polymerase III"; RL Mol. Biochem. Parasitol. 46(2):229-239(1991). XX FH Key Location/Qualifiers FH FT source 1..7720 FT /organism="Plasmodium falciparum" FT /strain="Honduras 1" FT /mol_type="genomic DNA" FT /dev_stage="blood stage" FT /db_xref="taxon:5833" FT exon <1..5418 FT /number=1 FT CDS join(1..5418,5577..6776,6890..7012,7182..7394,7507..7572) FT /codon_start=1 FT /product="RNA polymerase III largest subunit" FT /db_xref="GOA:P27625" FT /db_xref="HSSP:1K83" FT /db_xref="InterPro:IPR007083" FT /db_xref="UniProtKB/Swiss-Prot:P27625" FT /protein_id="AAA29729.1" FT /translation="MMKKKNIDIEELKRLIEESSMKKRFVKDIKRNCEIKSIRFGIMSK FT EDIIKYSEVKIMNREMYKNNSGIPYPYGVLDLKLGAHKSNSVCETCNKKLINCSGHFGY FT IELNYPVFHIGYYKYIIHILYCICKYCSSLLLSKEKIDFYCNLKKKSTDDSFYKKHLFK FT RILNNCKKVNKCYICGNPQGVIKKIIKPSLDQFMKLKHILKVKENGKMIIKEEDLNSLY FT VLKLFKNINPYHVKLLNIENPEKLIITALLVPPNTIRPSVIIDEHGTAEDDLTCILSEI FT TQLNNTIYNQCTNGYQTNQFLGNVEFLQLQITRFINSDSPAVSQLLATQNISKPGRGIC FT QRLKGKEGRFRCNLSGKRVDFSSRTVISPDPNISIDEVVIPKIIAMRLTYPETVNKYNI FT DKLKMLIKNGCNKWPGANYIIKKSKKGTDPYSDISTSYNNNSNNISSIGCSNIFNVVNN FT YINNNCKNVRYNIKDVNNNVLLKDMCDINNMNNDINNNINNIYKNTSETNLCNVNNHNN FT NNNIYCNNQTQDNEEERKNSQFNKISLKYANKNHVIQNLNIGDVVERHICDGDIVLFNR FT QPSLHRMSIMCHKAKIMDFKTFRFNECVCSPYNADFDGDEMNLDVPQTEEARAEALYLM FT NVKHNLITPKNGEVIIALTQDFLSASYIITNKDTFLDRDTFCLLCSYFSDASLYIELPI FT PAILKPKELWTGKQLISVLIKPNKKENTIINFEIQEREYSNKFGDLKHLCLNDSYVCFY FT KSELICGSLGKKVLGSSKYGLFYYLIHHNSSHIALKIMNRLSKLTSRYFSNKGMTIGID FT DVRPSQTLTEKKKDLLLKGYEKVNNEIILYNEKKMQIQPGCTLEETLEIKVKSILDDLR FT NDAGKTCNQYLHYLNKPLIMFNSGAKGALINIAQMIACVGQQNVAGQRIQNGFINRTLP FT HFHFHCKDSESRGFVQNSFYTGLSPTEFFFHTMSGREGLVDTAVKTAETGYMQRRLMKA FT LEDLSIHYDYSVRSCDKQIVQFIYGDDALNPSYIDNNNTYLDQFDKVFDHIVSISSSHL FT LLSYKNKIPYLPHVQHQNKTSNMNNIYNNMNNINNNDSNRSIIYNNDSNMNNINNNDSN FT MNSIHNNNSNMNNIHNNDSNRSIIHNNDSNMNSIHNNDSNMNSIHNNNSNMNNIHNNDS FT NRSIIHNNDSNMNSIHNNDSNNNNNYKDCTHNPYICNESLIIRNIMNRLIYQNIAQEDL FT FIPLEHDEFLVNKIMESYTDQECNYEDIIRSLDLNKNVSYIHNDQGKHLSLQMCAEEHI FT TINNTNNDNTYVEQIEMKELSKNKTKEKQSFKGTIRDMHEDSEEQMNKFITKKAKFFIE FT KKKGKMHECNDDIEYNNTQYDNIQYNNISCNYIKSQNLENTHHQVNNDLSFIKNNVILP FT PKEYHSIFHFVNDYRNVVEIKNLMDKKKIFLNNSEKNVVQSKYNRMSKNLKKKIEIINN FT IYRNEKKKLNRWKTKMDNDDNYWSSDDDSIIAKKIIKIKNKEKRKYHPKEEKENFDRNN FT YKMITDNNNNDNNNNNNDNNNNDNNNNNNNSNNNNYYYNLHDDVNNLGVTNYNTNIYPN FT DCNGIYEKETNNNELTTNSNMCDKNNDFSDEFFNNINENDLLYDNKYYRQIFKNVIGFV FT SVFEYVESYKQHYILFPYEIIKWTSFLLEYLTEIIPTNIFLHTKLSKKEKPTHQKNTGK FT MKIYIEEIKKWLFIKAINIYKYFSFKKSIELIKKKDYFNYIIKNYDISHRYIIHDYSFI FT NLKQLYLFIFFNIYKYFKYISTPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMNVTL FT GVPRIKEIINASNSIQTPILNIPLEVNDNYNFALMMKSKLEKTTIRDICMYIKEDYTSR FT GVFLSVKFNEELIQKLFLNINAYNIKDIILKQSHINKIKINKIHINVINKYKLHISLKN FT DEFIFFQMESLKKGLLDLLIYGDKDIKRCIIKKEDIEVTDNEDEICDDMDEYYNVSQGT FT ELYERKCNSKEENKNAIRVKKEEIDDNLEKEENIIYVSEKDSVNQLKSEKKKDINDDNN FT NNDDNNNNNDDDNKINDTIFNDDIDSDRNNLKENGSKLENVGEHIIERLSYKMKEKNVK FT KEHIKKEPNLINLDTINLDTLNFDEINVHNINNEKIEFYDEHLNICQGNKKHIQKKKKK FT KTVYSILVEGNSLNYVLGLEGVDFKHIISNHVINVFQVLGIEAARITIINEIKKCVEAY FT SIDIDIRHIMLLADIMAFTGDILGINRFGIQKARQSTLMLASFEETNEHLFVSSFFKNV FT DEINNISESIIVGKNIPIGTGAFQLLYDYKLEKETKNLTLLEKAERETAMNY" FT intron 5419..5576 FT /number=1 FT exon 5577..6776 FT /number=2 FT intron 6777..6889 FT /number=2 FT exon 6890..7012 FT /number=3 FT intron 7013..7181 FT /number=3 FT exon 7182..7394 FT /number=4 FT intron 7395..7506 FT /number=4 FT exon 7507..7572 FT /partial FT /number=5 XX SQ Sequence 7720 BP; 3369 A; 715 C; 1036 G; 2600 T; 0 other; atgatgaaga agaaaaatat cgacatagag gagcttaaaa gactcattga agaaagcagc 60 atgaaaaaaa gatttgtaaa agatataaaa agaaattgtg aaataaaaag tataaggttt 120 ggtattatga gtaaggaaga tataataaaa tattcagaag tgaaaataat gaatagagaa 180 atgtataaga ataatagtgg tataccatat ccttatggtg ttttagattt aaaactaggt 240 gctcataaaa gtaactctgt atgtgaaaca tgtaataaga aattaataaa ttgttcagga 300 cattttggtt atatagaatt gaattatcct gtatttcata ttggttatta taaatatata 360 atacatatat tatattgtat atgtaaatat tgttcaagtt tattattatc aaaggaaaaa 420 attgattttt attgtaattt aaaaaaaaaa agtacagatg attcatttta taagaaacat 480 ttatttaaaa ggatattaaa taattgtaaa aaagtaaata aatgttatat atgtgggaat 540 ccacagggtg taattaagaa aataataaaa cctagtttag atcaatttat gaaattaaaa 600 catatattaa aagtaaaaga aaatgggaaa atgattataa aagaagaaga tttaaatagt 660 ttatatgttt tgaagttatt taaaaatata aatccatatc atgttaaatt attaaatata 720 gaaaacccag aaaaattaat tataacagct ttattagtac cacctaatac tataagacca 780 tctgttataa tcgacgaaca tggaacggct gaagatgatt taacttgtat tctttctgaa 840 ataacacaat tgaataatac tatatataat caatgtacga acggttatca gacgaatcaa 900 tttctgggta atgtcgaatt tttacaatta caaattacaa gatttattaa tagtgattct 960 ccggctgttt cacaattatt agcaacacaa aatatctcta aacctgggag aggtatttgt 1020 caaaggttaa aaggaaaaga aggaagattt agatgtaact tatcaggaaa aagagttgac 1080 ttctcaagta gaacggtgat atcaccagat ccaaacatat ctatagatga agtggtgata 1140 ccaaaaatta ttgccatgag attaacatat cctgagacgg tgaataaata taatattgat 1200 aagttaaaaa tgttaataaa aaatggttgt aataaatggc ctggtgcaaa ttatataata 1260 aagaagtcaa aaaagggaac tgatccatac tcagatatta gcaccagtta taataataat 1320 agtaataata ttagtagtat tggttgtagt aatatattta atgtagttaa taattatatt 1380 aataacaatt gtaagaacgt tagatataat ataaaagatg taaataataa tgtattatta 1440 aaagatatgt gcgacataaa caatatgaat aatgatataa acaataatat taacaatata 1500 tataagaata cgtctgaaac aaacttatgt aacgtgaaca accacaataa taataataat 1560 atatattgta ataatcagac acaagataat gaagaagaac ggaaaaacag ccaatttaat 1620 aaaataagtt taaaatatgc aaataaaaat catgttatac aaaatttaaa tattggagat 1680 gtagtagaaa gacatatatg tgatggagat attgttttat ttaatagaca accatcttta 1740 catcgtatgt ctattatgtg tcataaagca aaaataatgg attttaaaac atttcgtttt 1800 aatgaatgtg tatgttcccc atataatgct gattttgatg gtgatgaaat gaatttagat 1860 gttccacaaa cagaagaagc tcgtgctgaa gctttatatt taatgaatgt aaaacataat 1920 ttaataactc caaaaaatgg agaagttata atagctttaa cacaagattt tttatcagca 1980 tcctatataa ttacaaataa agatacattt cttgatagag atactttttg tttattatgt 2040 tcctattttt ctgatgcttc attatatatt gaattaccca ttccagctat tttgaaacct 2100 aaagaattat ggacaggaaa acaattaatt agtgtattaa ttaaacctaa taaaaaagaa 2160 aatactatta ttaattttga aatacaagaa agagaatatt ccaataaatt tggagatttg 2220 aaacatttat gtttaaatga ttcatatgtt tgtttttata aatctgaatt aatatgtggt 2280 tctttaggga aaaaagtttt aggctcttca aaatatggtt tgttttatta tttaatacat 2340 cataattcaa gtcatatagc attaaaaatt atgaacagat tatctaaact aaccagtaga 2400 tacttttcta ataaaggtat gacgataggt attgatgatg taagaccatc acaaacctta 2460 acagagaaaa agaaagattt attattaaaa ggttatgaaa aggtaaataa tgaaattata 2520 ttatataatg aaaagaagat gcaaatacaa ccaggttgta ccttagaaga aacattagaa 2580 ataaaagtta aaagtatatt agatgattta agaaatgatg caggaaaaac atgtaatcaa 2640 tatttacatt atttaaataa accattaatt atgtttaatt cgggagcaaa aggagcatta 2700 attaatatag cacaaatgat tgcttgtgta ggacaacaaa atgttgctgg tcaaagaata 2760 caaaacggtt ttataaatag aacattacca catttccatt ttcattgtaa agattcagaa 2820 agtagaggat ttgtacaaaa ttctttttat acaggattaa gtccaaccga attttttttt 2880 cacacaatgt cgggaagaga aggtcttgta gatacagcag taaaaacagc cgaaacaggt 2940 tacatgcaaa gaagacttat gaaagcatta gaagatttgt caattcatta tgattattct 3000 gtacgatcat gtgataaaca aatcgtacaa tttatatatg gagatgatgc attaaatcct 3060 tcgtatattg ataataataa tacatatctt gatcaatttg acaaggtatt tgatcatatt 3120 gtatctatat catctagcca tttgttatta tcttataaaa ataaaatacc ttacttgcct 3180 catgttcagc atcaaaataa aacaagtaat atgaacaata tttataataa tatgaacaat 3240 attaataata atgatagtaa taggagcatt atttataata atgatagtaa tatgaacaat 3300 attaataata atgatagtaa tatgaacagt attcataata ataatagtaa tatgaacaat 3360 attcataata atgatagtaa taggagcatt attcataata atgatagtaa tatgaacagt 3420 attcataata atgatagtaa tatgaacagt attcataata ataatagtaa tatgaacaat 3480 attcataata atgatagtaa taggagcatt attcataata atgatagtaa tatgaacagt 3540 attcataata atgatagtaa taataacaat aattataaag attgtacgca taatccttat 3600 atctgtaacg aatcattaat tatacgtaat attatgaaca gattgattta ccaaaacatt 3660 gcacaagaag atctattcat acctttagaa catgatgaat ttttagttaa caaaattatg 3720 gaatcttata cggatcagga atgtaattat gaagatatca tcagatcttt agatttaaac 3780 aaaaatgttt cttatataca taatgaccag ggaaaacatt tatctttgca aatgtgtgca 3840 gaagaacaca taactattaa taatacaaat aatgataata catatgttga acaaatagaa 3900 atgaaggaat taagtaaaaa taaaacaaaa gaaaaacaat catttaaagg aacgataaga 3960 gatatgcatg aagattctga agaacaaatg aacaaattta taacaaaaaa ggcaaagttt 4020 ttcatagaga agaaaaaagg aaaaatgcat gaatgtaacg atgacatcga atataataac 4080 acccaatatg ataacatcca atataataat atttcatgta attatatcaa atctcaaaat 4140 ttagaaaaca cacatcatca agttaataac gatttgtctt tcataaaaaa taacgtcatt 4200 ttaccaccaa aagaatatca ttccatcttt cattttgtaa atgattatag aaatgttgtg 4260 gaaataaaaa acttgatgga taaaaaaaaa attttcctga acaattcaga aaaaaatgtg 4320 gtgcaatcga aatataacag gatgagtaaa aatttaaaaa aaaaaattga gataattaat 4380 aatatatata gaaatgaaaa gaaaaaatta aatcgatgga aaacaaaaat ggataatgat 4440 gataattatt ggtcatctga tgacgattct attattgcca agaaaattat aaaaataaaa 4500 aataaagaaa aaagaaaata tcaccccaaa gaagaaaagg aaaattttga tagaaataat 4560 tataaaatga taactgataa taataataat gataataata ataataataa tgataataat 4620 aataatgata ataataataa taataataat agtaataata ataattatta ttataatctt 4680 catgacgatg taaacaattt aggagttaca aattataata caaatatata tcccaatgat 4740 tgtaatggga tatatgaaaa agaaacaaat aataatgaac ttacaacaaa tagtaatatg 4800 tgtgataaaa ataatgattt ctctgatgaa ttctttaata atataaatga aaatgattta 4860 ttatatgata ataaatatta tagacaaata tttaagaatg ttattggttt tgttagtgtt 4920 tttgaatatg ttgaatcata taaacaacat tatattttat tcccatatga aataataaaa 4980 tggactagct ttttattaga atatttaaca gaaatcattc ctacaaatat attccttcat 5040 accaaattat cgaaaaaaga aaaaccaact catcaaaaaa atactgggaa aatgaagata 5100 tatatagaag aaattaaaaa atggttattt attaaagcta taaatatata taaatatttt 5160 agttttaaaa aaagtattga attaatcaaa aaaaaagatt attttaatta tattattaaa 5220 aattatgata tatcacatag atatattata catgattatt cttttattaa tttaaaacag 5280 ttatatcttt ttatcttttt taatatatat aaatatttta aatatatatc tacccccggt 5340 gatgccgttg gatcaatatc ggctcagtcg attggtgagc ccggaacaca aatgacgttg 5400 aagacttttc actttgcagg tacatacaag aattaataaa ataaataaac gatacattaa 5460 tataatgatt tacaattcgt gctttgtaca tagcacaaat atatatatat atatatatat 5520 atacatatat tttttttttt tttttattat taattttttt tttttttttt tttttaggtg 5580 tggctagcat gaatgttacc ttaggtgttc ctagaataaa agaaataatc aacgcatcta 5640 acagtattca aacaccaata ttaaacatcc ctttagaagt gaacgataat tataattttg 5700 ccctaatgat gaaatcaaaa ttagaaaaga cgacaatacg tgatatttgt atgtatataa 5760 aagaagatta tactagtcga ggtgtatttc tatccgttaa gtttaacgaa gaattaatac 5820 agaagctttt tctaaatatc aatgcataca atatcaaaga tattatatta aaacaaagtc 5880 atattaataa aataaaaatt aataaaatac atattaatgt aataaataaa tataaattac 5940 atatttcttt aaaaaatgat gaatttatat tttttcaaat ggaatcctta aaaaagggtt 6000 tactagatct cttgatttat ggagataaag atattaaaag gtgtatcata aaaaaagaag 6060 atattgaagt aacagataat gaagatgaaa tatgtgatga catggatgaa tattataatg 6120 tttctcaagg gacagagtta tatgaaagaa aatgtaatag taaagaagaa aataaaaatg 6180 ctattcgtgt taagaaagaa gaaattgatg ataatctcga gaaggaagag aatattattt 6240 atgtgtcaga aaaggatagc gttaatcaat tgaaaagtga aaaaaagaag gatattaatg 6300 atgataataa taataatgat gataataata ataataatga tgatgataat aaaattaatg 6360 atactatttt taatgatgac attgacagtg atcgaaacaa ccttaaagaa aatggtagca 6420 aattagaaaa tgtcggagaa catattatag aaagattaag ctacaaaatg aaagaaaaaa 6480 atgttaaaaa agagcatata aaaaaagaac cgaaccttat aaatttagac actataaatt 6540 tagatacatt aaactttgac gaaataaatg tacataatat aaataatgag aaaattgaat 6600 tttatgatga acatttaaat atatgtcagg gaaacaaaaa acatattcaa aaaaaaaaaa 6660 aaaaaaaaac tgtatactca atattagtag aaggaaattc gttgaattat gttcttggtt 6720 tagaaggtgt tgattttaag catatcattt ctaatcatgt cataaacgtt tttcaagtaa 6780 ttaacatgaa gtggaagata catatgtgta aataaataaa tatatatata tatatatata 6840 tatatatttt atgtatttgt aaatattctt atattttatt ttttcttagg ttttgggtat 6900 agaagcagcc agaataacaa taataaatga aattaaaaaa tgtgtagaag cttatagtat 6960 tgatatagac attagacata ttatgctcct agccgacatt atggccttta cgttagttta 7020 tttaaagata tatatatata tatatatata tatatatata tatatatata tatgtgtgtg 7080 tatgtttatt tatttgtctt tttatacata tatatccttt tagttagcta catttttaca 7140 tcttgtcata ttatttaatt tttttttttt ttttttttag tggagatatt ttaggtataa 7200 acaggttcgg aatacaaaag gctcgacaga gtaccttaat gttagcatct tttgaagaaa 7260 ccaatgagca tttatttgtt tcatcatttt ttaaaaatgt ggatgaaata aataatataa 7320 gtgagagtat catagtagga aaaaacatac ctattggaac aggagccttt caacttcttt 7380 atgattataa attgtaagtt ttgagaagaa aaaaaattta tattctacat attatggata 7440 ttataagaat atatatatat atatatatat ttatatttat atttatattt tttttttttt 7500 tttagtgaga aggaaacaaa aaatttaaca ctcctcgaaa aggcagaaag agaaacagca 7560 atgaattatt aaatatatcc tatatatata tatatttttt tttgaaacaa tataattaat 7620 tgtgtatttt ataattaacg aattatttta ttttataaat ctattaatta tttatatgat 7680 taatatatga taatcactgg cgattgtttt tttagaattc 7720 // |
|