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EBI DbfetchID M67438; SV 1; linear; genomic DNA; STD; PRO; 3866 BP. XX AC M67438; XX DT 26-FEB-1993 (Rel. 35, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Clostridium thermocellum xylanase (xynX) gene, complete cds. XX KW . XX OS Clostridium thermocellum OC Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; OC Clostridium. XX RN [1] RP 1-3866 RA Pack M.Y., Jung K.H.; RT "Nucleotide sequence of exo-beta-1,4-glucanase gene of Clostridium RT thermocellum"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..3866 FT /organism="Clostridium thermocellum" FT /mol_type="genomic DNA" FT /tissue_lib="ATCC 27405" FT /db_xref="taxon:1515" FT promoter <1..387 FT /gene="xynX" FT RBS 388..392 FT /gene="xynX" FT CDS 400..3663 FT /codon_start=1 FT /transl_table=11 FT /gene="xynX" FT /product="xylanase" FT /EC_number="3.2.1.91" FT /db_xref="GOA:P38535" FT /db_xref="InterPro:IPR001000" FT /db_xref="InterPro:IPR001119" FT /db_xref="InterPro:IPR003305" FT /db_xref="InterPro:IPR008960" FT /db_xref="InterPro:IPR008979" FT /db_xref="InterPro:IPR010502" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR015922" FT /db_xref="InterPro:IPR017853" FT /db_xref="InterPro:IPR018087" FT /db_xref="UniProtKB/Swiss-Prot:P38535" FT /protein_id="AAA23227.1" FT /translation="MKNNLSKFVSIFTAFIMIFGTSLFFPHVSAFADDNNANLVSNGDF FT ESGTIDGWIKQGNPTLAATTEEAIGQYSMKVAGRTQTYEGPAYSFLGKMQKGQSYNVSL FT KVRLVSGQNSSNPLITVTMFREDDNGKHYDTIVWQKQVSEDSWTTVNGTYTLDYTGTLK FT TLYMYVESPDPTLEYYIDDVVVTPQNPIQVGEISNNQITIQNDIPDLSSVFKDYFPIGV FT AVDPSRLNDTDPHAQLTAKHFNMLVAENAMKPESLQPTEGNFTFDNADRIVDYAIAHNM FT KMRGHTLLWHNQVPDWFFQDPSDPTKPASRDLLLQRLKTHITTVLDHFKTKYGAQNPII FT GWDVVNEVLDDNGSLRNSKWLQIIGPDYIEKAFEYAHEADPSMKLFINDYNIENNGVKT FT QAMYDLVKKLKSEGVPISGIGMQMHININSNIDNIKASIEKLASLGVEIQVTELDMNMN FT GNVSNEALLKQARLYKQLFDLFKAEKQYITAVVFWGVSDDVTWLSKPNAPLLFDSKLQA FT KPAYWAIADPSKAIPDIQSAKALEGSPTIGANVDSSWKLVKPLYANTYVEGTVGATATV FT KSMWDTKNLYLLVQVSDNTPSSNDGIEIFVDKNDNKSTSYETDDEHYTIKSDGTGSSDI FT TKYVTSNADGYIVQLAIPIEDISPTLNDKIGLDVRLNDDKGSGSIDTVTVWNDYTNSQD FT TNTSYFGDIVLSKPAQVATAIYGTPVIDGKIDDIWNKVDAITTNTWVLGSDGATATAKM FT MWDDKYLYVLADVTDSNLNKSSVNPYEQDSVEVFVDQNNDKTSYYESDDGQYRVNYDNE FT QSFGGSTNSNGFKSATSLTQSGYIVEEAIPWTSITLLNGTIIGFDLQVNDADENGKRTG FT IVTWCDPSGNSWQDTSGFGNLLLTGKPSGVLKKSVTFNDIKDNWAKDVIEVLASRHIVE FT GMTDTQYEPSKTVTRAEFTAMILKLLNIKEEAYNGEFSDVKNGDWYANAIEAAYKAGII FT EGDGKNMRPNDSITREEMTSIAMRAYEMLTSYKEENIGATSFNDDKSISDWAKNVVANA FT AKLGIINGEPSNVFAPKGIATRAEAAAIIYGLLEKSNNL" FT terminator 3667..3700 FT /gene="xynX" XX SQ Sequence 3866 BP; 1422 A; 576 C; 803 G; 1065 T; 0 other; tttaaaaatt cgaagattga caaagagagc cggaattgtc aggttggtaa tttcaccata 60 agggcttaag acccagcaag ggagcataac tgacatccac ctcatgtaag gcagaacgaa 120 ggaattaagg acaaagatcc tgtgagacat gggagggtat gccacatgag cttaagtgga 180 attcataggc caaaatatgg aaaaacaaca gaagcttatt tgggttacct atcacatgtg 240 aaattaatga ataaatagca ttaatataca tgagggctcc tttgaagatc atgaaaattt 300 gagaatgagt gagatattaa aagaaaatca aagattatag agggaggtga tagtaaataa 360 atttttcaat gaattaaatt tactgaggga ggaagtaaga tgaaaaataa tttaagtaag 420 tttgtatcta tttttacagc ttttataatg atttttggaa catcattgtt ttttccacac 480 gtaagtgcat ttgcagatga taataatgcg aatttggttt ctaatgggga ctttgaatca 540 ggtacaattg atggatggat taagcaaggt aacccgacat tagcagcaac gactgaggaa 600 gcaattgggc aatacagtat gaaagttgcg ggtagaacac aaacatatga aggacctgca 660 tatagctttt tagggaaaat gcagaaaggt caatcatata acgtatcgct taaagttaga 720 cttgtttctg gacaaaattc atccaatcct ttgattactg tgacaatgtt tagagaagat 780 gacaatggca aacattatga tacaatagtt tggcaaaaac aagtttctga ggattcatgg 840 actactgtaa acgggactta tacattagat tacactggaa cattaaaaac attatatatg 900 tacgtagaat cgccagatcc aacgctggaa tactatattg atgatgttgt agtgacacca 960 caaaatccaa tacaagtagg tgaaatttcg aataatcaaa tcacaataca aaatgacatt 1020 ccagatttgt cttcagtatt taaagattat ttcccaatcg gcgttgcggt tgatccaagt 1080 agattaaatg atactgatcc gcatgctcaa ttgacggcta aacattttaa tatgcttgtt 1140 gcagaaaacg ccatgaaacc ggaaagctta cagccgacag aaggcaattt tacctttgat 1200 aatgcagata gaatagttga ttatgcaata gcacataata tgaagatgag aggtcatact 1260 ttgctttggc acaatcaggt gccggattgg tttttccagg acccatctga tccaactaaa 1320 ccagcttcaa gggatctgct gcttcaaaga ttaaaaacac acataacaac tgtattagat 1380 cactttaaaa cgaagtacgg cgcacaaaat ccaataatcg gatgggatgt tgtaaatgag 1440 gttcttgatg ataatggcag cctaaggaat tccaagtggt tgcaaattat aggtcctgat 1500 tatatagaaa aagcttttga atatgcacat gaagcagatc catccatgaa attgtttatt 1560 aatgattaca atatcgaaaa taacggtgtt aagacacaag ctatgtatga cttagtgaaa 1620 aaattaaaga gcgaaggtgt acccataagc ggaataggca tgcaaatgca tataaatata 1680 aattcaaata tagacaatat aaaagcttct atagaaaaac tcgcttcatt aggtgtggaa 1740 atacaggtaa ctgaattaga tatgaacatg aatggtaatg tatctaacga agcattgctt 1800 aagcaagcaa gattgtataa acaattattt gacttgttta aagcagaaaa acaatatata 1860 actgctgtag ttttttgggg agtttcggat gatgtaacgt ggcttagtaa gccaaatgct 1920 ccgctgcttt ttgattcaaa gttacaggca aaaccagctt attgggcaat agcagatcca 1980 agcaaagcta tacctgatat tcaatccgca aaagctttag aaggatcacc gacgattggt 2040 gcaaatgttg atagttcttg gaaacttgta aaaccattgt atgcaaatac ttatgtggaa 2100 ggaactgtcg gagcaactgc tactgtcaaa tctatgtggg atactaaaaa cttatattta 2160 ttagtacaag tttcagataa tactccatct agtaatgatg gcattgagat ttttgtagat 2220 aagaatgaca acaaatctac ttcttatgaa actgatgatg aacattatac aattaagagt 2280 gatggtacag ggagttcaga tattacaaaa tatgtgacat ccaatgctga tggatacatt 2340 gtacagttag ccattccaat tgaagatatt agtcctacac ttaatgacaa aattggatta 2400 gacgtaaggt taaatgatga taaagggagt ggaagcatag atactgtaac agtctggaat 2460 gattatacca acagtcaaga tacaaatacc tcatattttg gagatatagt attatcaaaa 2520 cctgcacaag ttgcaacagc aatatatggc acaccagtta ttgatggaaa aatagatgat 2580 atttggaata aggttgatgc gattacaact aatacatggg ttttaggctc agatggtgct 2640 actgcaacag caaaaatgat gtgggacgat aaatatctat atgtgttggc agatgtaaca 2700 gatagcaatt tgaataaatc cagtgtgaat ccttatgaac aggattctgt tgaggtcttt 2760 gtagatcaga ataatgataa aacttcctac tatgaaagtg atgacggtca atatagagtt 2820 aactatgaca atgaacaaag ttttggagga agcactaatt caaatggatt taagtcagca 2880 actagtctta cacaaagtgg atatattgta gaagaagcca ttccttggac tagtatcact 2940 ctgttaaatg gcactatcat aggatttgac ttgcaagtta atgatgcaga tgaaaatggt 3000 aagaggacgg gtattgttac atggtgcgat cccagcggca attcatggca agatacttct 3060 ggatttggca atttgttgct tacaggtaag ccatctggtg tccttaaaaa aagtgtgacg 3120 tttaatgaca taaaagacaa ttgggcgaaa gacgtaatag aagtattagc atcaaggcac 3180 atagtagaag ggatgacaga cacccagtac gaaccaagca agacagtaac aagagcagaa 3240 ttcacagcaa tgatactgaa gctattaaac ataaaagaag aagcatacaa tggagaattc 3300 agcgatgtaa agaatggaga ctggtatgca aatgcaatag aagcagcata taaagcggga 3360 ataatcgaag gagacggaaa aaacatgagg cccaatgaca gtataacaag agaagagatg 3420 acatccatag ccatgagagc atatgagatg ctgacatctt ataaagaaga aaatatagga 3480 gcgacatcat ttaatgatga caaatcaata agcgattggg caaagaatgt agtggcaaat 3540 gcagcaaaat taggaataat aaatggagag cccagtaacg tgtttgcgcc taaaggtata 3600 gctacgagag cagaagcagc agctatcata tacggcttat tagagaaatc aaataatcta 3660 taagtaaaaa ggcagaggga attcaatcct cctgcctttt aaatatttta cactgtgatt 3720 tctattaatg tgctgttttt atcgaggtta aagtgtaatt ttatattgtc aataactaat 3780 tcgtattcgc ctaagaaacc tgtaaattca aattcgcctg tgttacttgt gacaagacgt 3840 gtaggatgtg tccaccattc atcttt 3866 // |
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