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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M65057; SV 1; linear; genomic DNA; STD; PRO; 1291 BP.
XX
AC   M65057;
XX
DT   11-JUL-1991 (Rel. 28, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
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DE   Erwinia carotovora pectin lyase (pnl) gene, complete cds.
XX
KW   pectin lyase; pnl gene.
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OS   Pectobacterium carotovorum
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Pectobacterium.
XX
RN   [1]
RP   1-1291
RX   DOI; 10.1016/0006-291X(91)90927-Y
RX   PUBMED; 2018526.
RA   Ohnishi H., Nishida T., Yoshida A., Kamio Y., Izaki K.;
RT   "Nucleotide sequence of pnl gene from Erwinia carotovora Er";
RL   Biochem. Biophys. Res. Commun. 176(1):321-327(1991).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1291
FT                   /organism="Pectobacterium carotovorum"
FT                   /strain="Er"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:554"
FT   CDS             290..1234
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pnl"
FT                   /product="pectin lyase"
FT                   /db_xref="GOA:P24112"
FT                   /db_xref="HSSP:1JRG"
FT                   /db_xref="InterPro:IPR002022"
FT                   /db_xref="UniProtKB/Swiss-Prot:P24112"
FT                   /protein_id="AAA24857.1"
FT                   /translation="MAYPTTNLTGLIGFAKAAKVTGGTGGKVVTVNSLADFKSAVSGSA
FT                   KTIVVLGSSLKTSALTKVVFGSNKTIVGSFGGANVLTNIHLRAESNSSNVIFQNLVFKH
FT                   DVAIKDNDDIQLYLNYGKGYWVDHCSWPGHTWSDNDGSLDKLIYIGEKADYITISNCLF
FT                   SNHKYGCIFGHPADDNNSAYNGYPRLTICHNYYENIQVRAPGLMRYGYFHVFNNYVNKF
FT                   QLAFTVAQNANVISERNVFGSGAEKKGMVDDKGNGSTFTDNGSSPAAVASKSPAAKWTA
FT                   SSNYSYSLMTTAAAQSWVVSNAGAQNSALKFPS"
XX
SQ   Sequence 1291 BP; 366 A; 253 C; 297 G; 375 T; 0 other;
     taccccctat cagtctgatg aagttgaaca ggctgcgaac cgtattttta atggcggcgc        60
     ggtaaaaggc tggtgatgat aatcgtagcg ctgccatttt actaaaagat ggcggcgtat       120
     taattgggta ttgaattatt cgcaaggttg tttttttatt aaactcgatt aataagcgta       180
     atgaaatcct ttctatacaa tttttaattg tcggaggcgt attatttagt ctcaattaaa       240
     taatacgctg gaagacatta ttattcactc attgtaaaaa ggaaaactta tggcttatcc       300
     aacaacaaat cttactgggc ttattggttt tgcaaaagcg gcaaaagtta ccggaggaac       360
     gggcggtaaa gtcgttacgg taaattcttt ggccgatttt aaatcagcgg tgagcggttc       420
     cgcaaaaact attgtggtgc tgggatcatc gctgaaaacg tcggccttga ccaaggtggt       480
     atttggcagc aataaaacca tcgtcggttc tttcggtggc gctaatgtac tgaccaatat       540
     tcacctgcgt gctgagagca attcatctaa cgtcattttc cagaatctgg tttttaaaca       600
     tgatgttgcc atcaaagata atgacgatat ccagctgtat ttgaactacg gtaaagggta       660
     ttgggtggat cactgttcat ggcctgggca tacgtggagc gataacgatg gtagcctcga       720
     taaactgatt tatatcggcg agaaggcgga ttacatcacg atcagtaact gcttattctc       780
     aaaccataaa tatggttgca ttttcggcca tccggctgac gataataaca gcgcttacaa       840
     tggctatcca cgtttgacta tttgccataa ctattacgaa aatattcagg tgcgtgcgcc       900
     cggcctgatg cgttatggct atttccacgt attcaataac tacgtcaata aattccagtt       960
     ggcttttacc gtcgcgcaaa atgccaacgt tatttctgaa cgcaacgtat ttggcagcgg      1020
     tgctgaaaag aaagggatgg ttgatgataa aggcaatggt tcaaccttta ccgataatgg      1080
     cagttcgcca gcagcggtag cgagtaaatc gccagcggcg aaatggacgg catcatctaa      1140
     ctattcatac agtttgatga caaccgcggc ggcccaatcc tgggttgttt cgaatgcagg      1200
     ggcacaaaat agtgcgctga aattcccatc ataatcacgg aaggtttatt ttatgacgta      1260
     cctgcatgct cacttttatt gataattgaa a                                     1291
//
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