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EBI DbfetchID M64551; SV 1; linear; genomic DNA; STD; PRO; 4501 BP. XX AC M64551; XX DT 31-MAR-1992 (Rel. 31, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 14) XX DE Streptomyces lividans alpha-L-arabinofuranosidase precursor (abfB) and DE xylanase A precursor (xlnA) genes, complete cds. XX KW . XX OS Streptomyces lividans OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; OC Streptomycineae; Streptomycetaceae; Streptomyces. XX RN [1] RP 1-4501 RX DOI; 10.1016/0378-1119(91)90299-Q RX PUBMED; 1743521. RA Shareck F., Roy C., Yaguchi M., Morosoli R., Kluepfel D.; RT "Sequences of three genes specifying xylanases in Streptomyces lividans"; RL Gene 107(1):75-82(1991). XX RN [2] RP 1-4501 RX PUBMED; 9148759. RA Vincent P., Shareck F., Dupont C., Morosoli R., Kluepfel D.; RT "New alpha-L-arabinofuranosidase produced by Streptomyces lividans: cloning RT and DNA sequence of the abfB gene and characterization of the enzyme"; RL Biochem. J. 322(Pt):0-0(0). XX RN [3] RP 1-4501 RA Shareck F.; RT ; RL Submitted (04-FEB-1997) to the EMBL/GenBank/DDBJ databases. RL CRMA, Institut Armand-Frappier, Laval, Quebec, H7N4Z3, Canada XX RN [4] RP 1-4501 RA Shareck F.; RT ; RL Submitted (19-MAR-1998) to the EMBL/GenBank/DDBJ databases. RL CRMA, Institut Armand-Frappier, Laval, Quebec, H7N4Z3, Canada XX RN [5] RP 1-4501 RA Shareck F.; RT ; RL Submitted (16-JUL-1998) to the EMBL/GenBank/DDBJ databases. RL CRMA, Institut Armand-Frappier, Laval, Quebec, H7N4Z3, Canada XX FH Key Location/Qualifiers FH FT source 1..4501 FT /organism="Streptomyces lividans" FT /strain="1326" FT /mol_type="genomic DNA" FT /db_xref="taxon:1916" FT CDS complement(492..1919) FT /codon_start=1 FT /transl_table=11 FT /gene="abfB" FT /product="alpha-L-arabinofuranosidase precursor" FT /EC_number="3.2.1.55" FT /db_xref="GOA:P96463" FT /db_xref="InterPro:IPR000772" FT /db_xref="InterPro:IPR005193" FT /db_xref="InterPro:IPR008997" FT /db_xref="UniProtKB/Swiss-Prot:P96463" FT /protein_id="AAC26524.1" FT /translation="MHRGSLSRGQHVRGTRRRGAALAALAALLVATAPAQAAGSGALRG FT AGSNRCLDVLGGSQDDGALLQLYDCWGGTNQQWTSTDTGRLTVYGDKCLDVPGHATAPG FT TRVQIWSCSGGRNQQWRVNSDGTVVGVESGLCLEAAGAGTPNGTAVQLWTCNGGGNQKW FT TGLTGTPPTDGTCALPSTYRWSSTGVLAQPKSGWVALKDFTTVTHNGRHLVYGSTSSGS FT SYGSMVFSPFTNWSDMASAGQNAMNQAAVAPTLFYFAPKNIWVLAYQWGSWPFIYRTSS FT DPTDPNGWSAPQPLFTGSISGSDTGPIDQTLIADGQNMYLFFAGDNGKIYRASMPIGNF FT PGNFGSSYTTIMSDTKANLFEGVQVYKVQGQNQYLMIVEAMGANGRYFRSFTASSLSGS FT WTPQAASEGNPFAGKANSGATWTNDISHGDLVRDNPDQTMTVDPCNLQFLYQGKAPNAG FT GHYNSLPWRPGVLTLRH" FT mat_peptide complement(495..1808) FT /gene="abfB" FT /product="alpha-L-arabinofuranosidase" FT sig_peptide complement(1809..1919) FT /gene="abfB" FT misc_feature 1920..2309 FT /note="intercistronic region; contains the sequence found FT at the 5' end of other xln genes in various Streptomycetes; FT probably involved in regulation" FT promoter 2221..2254 FT /gene="xlnA" FT RBS complement(2298..2302) FT /gene="abfB" FT sig_peptide 2310..2432 FT /gene="xlnA" FT CDS 2310..3743 FT /codon_start=1 FT /transl_table=11 FT /gene="xlnA" FT /product="xylanase A precursor" FT /function="xylanolytic" FT /EC_number="3.2.1.8" FT /db_xref="GOA:P26514" FT /db_xref="InterPro:IPR000772" FT /db_xref="InterPro:IPR001000" FT /db_xref="InterPro:IPR008997" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="PDB:1E0V" FT /db_xref="PDB:1E0W" FT /db_xref="PDB:1E0X" FT /db_xref="PDB:1KNL" FT /db_xref="PDB:1KNM" FT /db_xref="PDB:1MC9" FT /db_xref="PDB:1OD8" FT /db_xref="PDB:1V0K" FT /db_xref="PDB:1V0L" FT /db_xref="PDB:1V0M" FT /db_xref="PDB:1V0N" FT /db_xref="PDB:1XAS" FT /db_xref="UniProtKB/Swiss-Prot:P26514" FT /protein_id="AAC26525.1" FT /translation="MGSYALPRSGVRRSIRVLLLALVVGVLGTATALIAPPGAHAAEST FT LGAAAAQSGRYFGTAIASGRLSDSTYTSIAGREFNMVTAENEMKIDATEPQRGQFNFSS FT ADRVYNWAVQNGKQVRGHTLAWHSQQPGWMQSLSGSALRQAMIDHINGVMAHYKGKIVQ FT WDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAK FT TQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALGVDVAITELDIQ FT GAPASTYANVTNDCLAVSRCLGITVWGVRDSDSWRSEQTPLLFNNDGSKKAAYTAVLDA FT LNGGDSSEPPADGGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSGTNQQWAATDAGEL FT RVYGDKCLDAAGTSNGSKVQIYSCWGGDNQKWRLNSDGSVVGVQSGLCLDAVGNGTANG FT TLIQLYTCSNGSNQRWTRT" FT mat_peptide 2433..3740 FT /gene="xlnA" FT /product="xylanase A" FT /function="xylanolytic" FT /EC_number="3.2.1.8" XX SQ Sequence 4501 BP; 730 A; 1596 C; 1479 G; 696 T; 0 other; gggcaaccgc cccaaccgcg ttgtccggca acaaacgtca cggggaacag ccgtggaccg 60 gaacggttcg tcacgccgtc gtcctggggg tggacaccgg cgccgagacc cagctggtca 120 cgtgcggcca catcccgccc tacctgctgc acgacgggac cgtcaccccg tgggcgccgg 180 gacggagcat gcgccgctcg gcctggcaga cctcgtcgac gagccgcgca cggtgtcctg 240 gttccccttc cccgccgggg cgacgctgct gctgtgcacc gacggtctca ccgaggcccg 300 ctcccccgcc ggcgccttct acccgctgga gacccgcctc gcctggcacg tcgacatcac 360 cgcgggccgg ctcacccacg cactcgtcga cgacgtccac gccttcacgg agggaccgca 420 gcaggacgac ttggcggtac tcaccgtacg ccgctcgccg caccgcatgc ggtcaccgtc 480 cgtcggagag gtcagtgccg cagggtgagg actcccggcc gccacggcag cgagttgtag 540 tgcccgcccg cgttcggggc cttgccctgg tagaggaact gcaggttgca ggggtcgacg 600 gtcatggtct ggtcggggtt gtcgcggacc aggtcgccgt ggctgatgtc gttggtccag 660 gtggccccgc tgttggcctt gcccgcgaag gggttgccct cactggcggc ctgcggggtc 720 cacgagccgc tcagactgga ggccgtgaag gagcggaagt agcgcccgtt cgcgcccatc 780 gcctcgacga tcatgaggta ctggttctgg ccctggacct tgtagacctg tacgccctcg 840 aacaggttgg ccttcgtgtc gctcatgatc gtcgtgtacg aggaaccgaa gttgcccggg 900 aagttcccga tcggcatgct cgcccggtag atcttgccgt tgtcaccggc gaagaacagg 960 tacatgttct ggccgtcggc gatcagggtc tgatcgatcg ggccggtgtc ggagccggag 1020 atgctcccgg tgaacagcgg ctgcggagcg gaccagccgt tggggtcggt ggggtcgctc 1080 gacgtgcggt agatgaaggg ccacgagccc cactggtacg ccagcaccca gatgttcttg 1140 ggcgcgaagt agaacagcgt gggcgccacc gcggcctggt tcatcgcgtt ctgtccggcc 1200 gacgccatgt ccgaccagtt ggtgaagggg ctgaacacca tcgagccgta cgaggacccc 1260 gaagaggtcg acccgtagac caggtgcctg ccgttgtgcg tcaccgtggt gaagtccttc 1320 agcgcgaccc acccgctctt cggctgtgcc agaacccccg tcgaggacca ccggtacgtc 1380 gacggaagcg cacacgtgcc gtccgtcggc ggcgtaccgg tcagaccggt ccacttctgg 1440 ttgccgccgc cgttgcacgt ccagagctgc accgccgtgc cgtttggcgt gccggcgccc 1500 gcggcctcca ggcacagccc ggactccaca ccgacgaccg tgccgtcgga gttcacccgc 1560 cactgctggt tccgtccgcc ggagcaggac cagatctgca cccgggtacc gggcgcggtg 1620 gcgtgccccg gaacatccag gcacttgtcg ccgtacacgg tgagccggcc ggtgtccgtc 1680 gacgtccact gctggttggt gccgccccag cagtcgtaca gctgcaggag cgcgccgtcg 1740 tcctggctgc cgcccagcac gtcgagacac cggttcgaac cggcaccgcg cagggcgccg 1800 ctgccggccg cctgagcggg ggcggttgcg acgagcagcg ccgccagcgc ggccagggcc 1860 gcaccacggc ggcgagtacc gcggacgtgt tgcccgcggc tgagacttcc tctgtgcatg 1920 ggaactccct cgactggggt gggtggttcc ttgccgggat ggagagcgac acgacatgtt 1980 cgcaatatcg aacagcggtc gaagagtcga gcgctccgca tcatagagaa ccggcgaacg 2040 ccgtcaatac ctctcgcatg tatcgccgcc accgcgaaac attcatgaga ggcgatctac 2100 ccgatgccgc acgtcacacg gcaggccgcc ccgtgacggc tcacgacctc gcagatcagg 2160 cccgactcac tcgatttcga aactttcgca caataactga aacttttccg gcgccaagta 2220 ttgaccgagc atcgtcaaca cctcaatcat tcctgtctga cttccctgcg ctccagtcct 2280 tccgtgacca ctactttgga ggcacagtca tgggctccta cgcccttccc agatcaggtg 2340 tccgcaggag cattcgcgtc ctgctgctgg cgctggtcgt cggcgtactc ggcacggcca 2400 ccgcactgat cgcgccgccg ggggcacacg ccgccgagag cacgctcggc gccgcggcgg 2460 cgcagagcgg ccgctacttc ggcaccgcca tcgcctcggg caggctgagc gactcgacgt 2520 acacgtcgat cgcgggccgt gagttcaaca tggtgacggc cgagaacgag atgaagatcg 2580 acgccaccga accgcagcgg ggccagttca acttcagctc cgccgaccgc gtctacaact 2640 gggcggtgca gaacggcaag caggtgcgcg gccacaccct ggcctggcac tcccagcagc 2700 ccggctggat gcagagcctc agcggcagcg cgctgcgcca ggcgatgatc gaccacatca 2760 acggcgtgat ggcccactac aagggcaaga tcgtccagtg ggacgtcgtg aacgaggcct 2820 tcgccgacgg cagttcggga gcgcggcggg actccaacct gcaacgcagc ggcaacgact 2880 ggatcgaggt cgccttccgc accgcgcgcg ccgccgaccc gtccgccaag ctctgctaca 2940 acgactacaa cgtcgagaac tggacctggg ccaagaccca ggccatgtac aacatggtgc 3000 gggacttcaa gcagcgcggc gtgccgatcg actgcgtcgg cttccagtcg cacttcaaca 3060 gcggcagccc ctacaacagc aacttccgca ccacactgca gaacttcgcc gccctcggcg 3120 tcgacgtggc catcaccgag ctggacatcc agggcgcccc ggcctcgacc tacgccaacg 3180 tgaccaacga ctgcctggcc gtctcgcgct gcctcggcat caccgtctgg ggtgtgcgcg 3240 acagcgactc ctggcggtcg gagcagacgc cgttgctgtt caacaacgac ggcagcaaga 3300 aggccgcgta caccgccgtc ctcgacgcac tcaacggcgg cgactcctcg gagccccccg 3360 cggacggggg acagatcaag ggcgtcggtt cgggccgctg cctcgacgtg cccgacgcca 3420 gcacctccga cggcacccag ctccagctgt gggactgcca cagcggcacc aaccagcagt 3480 gggccgccac tgacgcgggc gagctcaggg tctacggcga caagtgcctg gacgccgcag 3540 gcaccagcaa cggctccaag gtccagatct acagctgctg gggcggcgac aaccagaagt 3600 ggcgcctcaa ctccgacggg tccgtcgtcg gcgtccagtc cggcctctgc ctcgacgccg 3660 tcgggaacgg cacggccaac ggcaccctga tccagctgta cacctgctcc aacggcagca 3720 accaacgctg gacccgcacc tgaccggaca gtactgacgc gctcagggtc ggcccgtgcg 3780 ggcggtgacc ctcgcgaccg gtctgctcgc cgcggacgcc gacccgtcgg tcccgtcggg 3840 tctcatcgga tcccgtcggg tctcgtcggt ctcatcggct catcggctaa tcggcgctca 3900 tcgactcgtc gccgtcattc gtaccgcagg cgcagcgact cccgttcggc gtcctcgatc 3960 cggtccaggg tcaggccggg caggtttcag ctgcgcaagg gtcacctcgg cgctgctcgg 4020 ctgggcgtcg gcgggcatcc actgctcggg tcgccaggcg tcggcgcgca tcagtgactt 4080 cgggcagtgc ggatacacct gctcgacctg caccaccagc gcggtgaccg gcggctttcc 4140 cacgggagtg aggcgggcga gcagctccgg gcgggccgaa acacaggcgc gtccgttgat 4200 ccgcagcgtg gtcgggcggc cggggacgag gaagagcagc cccaggcgtc cggtctccag 4260 cacgttgtgc agggtgtcga gccgtttgtt gccggtcgcg tcggggatca ccagggtctg 4320 ctcgtccagc accgagacga acccggccgg gccgccacgt ggcgtcacgt ccgcccggcc 4380 ctcgcggtcc gcgctgccga tgaacaccag tgacgaacag ccgatcagcg tcccgggtct 4440 cctcggtcag gcggtcggtc tccttgcgca gcgagttcgg gttcgggttc gggtagagct 4500 c 4501 // |
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