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EBI DbfetchID M62868; SV 1; linear; genomic DNA; STD; PRO; 3855 BP. XX AC M62868; XX DT 09-SEP-1992 (Rel. 33, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 6) XX DE P.denitrificans cobalamin (5'-phosphate) synthase (cobV) gene; DE nicotinate-nucleotide:dimethylbenzimidazole phosphoribosyltransferase DE (cobU) gene; ORF1 and ORF4 genes, complete cds. XX KW cobalamin (5'-phosphate) synthase. XX OS Pseudomonas denitrificans OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RP 1-3855 RX PUBMED; 1917841. RA Cameron B., Blanche F., Rouyez M.-C., Bisch D., Famechon A., Couder M., RA Cauchois L., Thibaut D., Debussche L., Crouzet J.; RT "Genetic analysis, nucleotide sequence, and products of two Pseudomonas RT denitrificans cob genes encoding nicotinate-nucleotide: RT dimethylbenzimidazole phosphoribosyltransferase and cobalamin RT (5'-phosphate) synthase"; RL J. Bacteriol. 173(19):6066-6073(1991). XX FH Key Location/Qualifiers FH FT source 1..3855 FT /organism="Pseudomonas denitrificans" FT /strain="SC510" FT /mol_type="genomic DNA" FT /db_xref="taxon:43306" FT CDS complement(108..809) FT /codon_start=1 FT /transl_table=11 FT /note="ORF1" FT /db_xref="GOA:P29938" FT /db_xref="InterPro:IPR001969" FT /db_xref="InterPro:IPR009007" FT /db_xref="InterPro:IPR011969" FT /db_xref="UniProtKB/Swiss-Prot:P29938" FT /protein_id="AAA25786.1" FT /translation="MTRLAILLSILAIGLILLIINHDTGRTMGLANDQFGQLVSLGAIA FT TLIGAGILQSRHRFGEGLRQIAIWLFVVLALVSAYVYRFELEGFGNRLLAGLIPGRATI FT ITDSEGQQEVVLQKMLNGHFETTATVDGKDISMLVDTGASNIALTYEDAEKIGLDPANL FT NFIVTVMTANGRAQAAPVMLQEISIGPITRRNIGATVAAKGKLDQSLLGMSFLSTLEML FT QMRTDELRLRD" FT gene complement(1063..1971) FT /gene="cobV" FT CDS complement(1063..1971) FT /codon_start=1 FT /transl_table=11 FT /gene="cobV" FT /product="cobalamin (5'-phosphate) synthase" FT /db_xref="GOA:P29936" FT /db_xref="InterPro:IPR003805" FT /db_xref="UniProtKB/Swiss-Prot:P29936" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA25787.1" FT /translation="MKGLGKVCAALAGAPARLARLAAVGEFGSGRVNGRNLGGAMGFVG FT DFCDDVARSIGFLSRIPMPARHFEGYDGRLSRAVRAFPFAGLAIALPSAAVAMALMALQ FT VSSLFAAFVVVAIQALVTGALHEDGLGDTADGFGGGRDREAALAIMKDSRIGTYAAVAL FT ILSFGLRVSAFASILPLFSPLGAAMAILGAACLSRAAMVWHWSSLPPARSSGVAASAGE FT PEPAATRFALAFGLLVAMLLFYLAQVPALGVIAALVAFLATVKGFARLAMRKIGGQTGD FT TIGATQQLTEIAVLGALALTV" FT gene 2099..3115 FT /gene="cobU" FT CDS 2099..3115 FT /codon_start=1 FT /transl_table=11 FT /gene="cobU" FT /product="nicotinate-nucleotide:dimethylbenzimidazole FT phosphoribosyltransferase" FT /EC_number="2.4.2.21" FT /db_xref="GOA:P29935" FT /db_xref="InterPro:IPR003200" FT /db_xref="InterPro:IPR017846" FT /db_xref="UniProtKB/Swiss-Prot:P29935" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA25788.1" FT /translation="MSASGLPFDDFRELLRNLPGPDAAALVAARERDAQLTKPPGALGR FT LEEIAFWLAAWTGKAPVVNRPLVAIFAGNHGVTRQGVTPFPSSVTAQMVENFAAGGAAI FT NQICVSHDLGLKVFDLALEYPTGDITEEAALSERDCAATMAFGMEAIAGGTDLLCIGEM FT GIGNTTIAAAINLGLYGGTAEEWVGPGTGSEGEVLKRKIAAVEKAVALHRDHLSDPLEL FT MRRLGGREIAAMAGAILAARVQKVPVIIDGYVATAAASILKAANPSALDHCLIGHVSGE FT PGHLRAIEKLGKTPLLALGMRLGEGTGAALAAGIVKAAAACHSGMATFAQAGVSNKE" FT CDS 3344..3757 FT /codon_start=1 FT /transl_table=11 FT /note="ORF4" FT /db_xref="GOA:P29945" FT /db_xref="InterPro:IPR000829" FT /db_xref="UniProtKB/Swiss-Prot:P29945" FT /protein_id="AAA25789.1" FT /translation="MDAKNTTHRIGQTGPVEKQTGIRHLFAAASYSLGGAKRLIGEAAF FT RHELIAFAAAMIAFIIVGATFFQYVAMAILFLLMMAFEAINTAIEEIVDRVSPEISEMG FT KNAKDLGSFACLCLIVANGVYAAYVVIFDGFMN" XX SQ Sequence 3855 BP; 691 A; 1227 C; 1265 G; 672 T; 0 other; gagctcatag agcagttcct cgatcgactt cagcagtcgc atgaaatcca tgccgtgctc 60 cccttgcttc tatgcgtggc acgaccgcgc gccggggccg atgccggtca gtcgcgcaga 120 cgcagctcgt cggtacgcat ctgcagcatc tccagcgtcg acaggaagct catgccgagc 180 aggctctgat cgagcttgcc cttggctgcg accgttgcgc cgatgttgcg gcgggtgatc 240 gggccgatcg agatctcctg aagcatcacg ggggctgcct gggcccggcc attggctgtc 300 atgaccgtga cgataaagtt gaggttggcc gggtcgaggc cgatcttttc cgcatcttca 360 taggtgagcg cgatgttgct ggcgccggta tcgaccagca tgctgatgtc cttgccgtcg 420 accgtcgcag tggtctcgaa atgaccgttc agcatcttct gcagcaccac ttcctgctgt 480 ccctcgctgt cagtgatgat ggtggcgcgg ccggggatga ggccggcgag caggcggtta 540 ccgaagccct ccaactcgaa gcggtagaca taggccgaga ccagcgccag aacgacgaag 600 agccagatgg cgatctgacg caggccttcg ccgaagcggt ggcggctctg caggatgccg 660 gcgccgatca gcgtggcgat ggcgccgagc gagaccagtt gcccgaactg gtcattggca 720 agccccatgg tgcggccggt gtcgtggttg atgatcagca ggatgaggcc gatggccagg 780 atcgagagca ggatggcaag acgggtcatg cttcgccgcg ttccctcgcc atgcgcgtgc 840 gtcgggtttc gcgccgcggc ttgcgttcga cggtctcaag ccgtgcaggc aacgcgctca 900 tgatcgcgcg gcgttcggca tcggtataga gcgtccagcg tccgacttcg tcgcgggtac 960 ggccgcagcc gaaacagtag ccggtcttgt catcgatcga acagacgaga atgcagggag 1020 attccatggg cgtgctcagt tttcccttga tatatcgatg tttcaaaccg tcagcgcaag 1080 ggcaccgagc acggcgattt cggtcagttg ctgcgtcgcc ccgatcgtgt cgcccgtttg 1140 tccgccgatc ttgcgcatcg ccagccgagc gaagcccttg accgtggcaa ggaatgcgac 1200 gagcgccgcg atgacgccga gcgccgggac ctgcgcgaga tagaagagca gcattgcgac 1260 aagaagtccg aaggcaagcg cgaagcgcgt ggccgccggt tccggctcgc cagccgaggc 1320 cgcgacgccg ctgctgcgcg ccggcggaag cgacgaccag tgccagacca tggcggcgcg 1380 gctgaggcac gctgcgccaa ggatcgccat ggcggcgccc agcggcgaaa agagcggcag 1440 gatcgaggcg aacgccgaga cgcgcaggcc gaaggagagg atgagggcga cggccgcata 1500 ggtgccgatg cggctgtcct tcatgatcgc aagcgccgct tcgcggtcgc gaccgccgcc 1560 aaagccatcg gccgtgtcgc caagcccgtc ttcgtgcagt gcgccggtga caagcgcctg 1620 gatggcgacg acgacaaagg cggcaaagag cgagctcacc tgcagcgcca tgagggccat 1680 ggcgacggcc gccgatggca gtgcgatcgc caggccggcg aacgggaagg cgcgcacggc 1740 acggctcaag cgcccgtcat aaccttcgaa atgacgcgca ggcatcggga tgcggctgag 1800 aaagccgatc gaccgcgcca catcgtcaca gaaatcgcca acgaagccca tggctcctcc 1860 aaggttgcgg ccattgaccc ggccgctgcc aaactcgccg actgcggcga gtctcgcaag 1920 ccgggcgggc gcacccgcga gggccgcgca cacttttccc agacctttca taggccgtct 1980 gcgaccgctc gcggatcgag acggcgacgc cgattggcgc aaatgtcgtt gcccgaattt 2040 tcggcgccct ctatgagggg cgtagataga gcttcacgat gatgcaagga ttcctcccat 2100 gagtgccagc ggcctgccgt ttgatgattt tcgcgaattg ttgcgcaacc tgccgggccc 2160 ggatgcggca gccctcgttg ccgcgcggga gcgggacgcc cagctgacga agccgccggg 2220 cgcgctcggc cgcctcgagg aaatcgcctt ctggctcgcc gcctggacgg gcaaggcgcc 2280 ggtggtcaac cggccgctgg tggcgatctt tgccggcaac cacggcgtca cccgccaggg 2340 ggtgaccccg ttcccgtcat ccgtcaccgc acagatggtc gagaattttg ccgccggtgg 2400 cgctgcgatc aaccagatct gcgtcagcca cgacctcggg ctgaaggtct tcgacctcgc 2460 actcgaatac ccgaccggtg atatcaccga ggaagccgcg ctgtccgagc gcgattgcgc 2520 cgcgaccatg gcctttggca tggaggcgat tgccggcggc acggatcttc tgtgcatcgg 2580 cgaaatgggc atcggcaaca ccacgatcgc ggccgcgatc aatctcggcc tttatggtgg 2640 cacggccgaa gaatgggtcg gtccgggtac cggctccgag ggcgaggtgc tgaagcgcaa 2700 gatcgccgcg gtcgaaaagg ccgtggcgct gcatcgcgat cacctgtccg atccgctcga 2760 actgatgcgt cgcctcggcg gtcgtgagat cgcggccatg gctggcgcca tcctggccgc 2820 ccgcgtccag aaggtacctg tcatcatcga cggctacgtg gcgaccgctg cggcttcgat 2880 cctgaaggcg gccaacccgt cggccctcga ccattgcctg atcggccatg tttcgggcga 2940 accggggcat ctgcgcgcga tcgagaagct cggcaagacg ccgctgctgg cactcggcat 3000 gcggcttggc gaaggcacgg gcgcggccct tgccgccggt atcgtcaagg cggcggccgc 3060 ttgccacagc ggcatggcga cctttgccca ggccggcgtc agcaacaagg aatagtgaag 3120 ttccggccgg gctttgcagg aaggccggcc ggtttctgtc caaggcctgt cacgggcgcg 3180 aagctgtcgc gtgccgggcc ttgatggatg cgtccttctc gcctatccaa agcgcaaatg 3240 cgcgccctag ctatagtctt gggtgcctgc aaccgagacc gccttgcatt cgcctcaatc 3300 acgatgtcga agcaagcaca gtttcaagcc ctgtcgagac gaaatggacg ccaagaacac 3360 cacgcaccgc attggacaga cgggtcctgt cgagaagcag accggcattc ggcatctctt 3420 tgccgctgcg agctattcgc tcggcggcgc caagcggctg atcggcgagg ctgcctttcg 3480 ccacgagctg atcgcctttg ccgccgcgat gatcgctttc atcatcgtcg gcgcaacctt 3540 cttccaatat gtggcgatgg cgatcctgtt cctgctgatg atggccttcg aggcgatcaa 3600 cacggcaatc gaggaaattg tcgatcgcgt ttctcccgaa atctcggaaa tgggtaagaa 3660 cgccaaggat ctcggctcct tcgcctgcct ctgcctgatt gtcgccaacg gtgtctatgc 3720 cgcctatgtc gtgatcttcg acggcttcat gaactgaccg gctagcgggc cggcgccttc 3780 acccgataaa gcacatgcgg acgcagcggg ttgcccccgg gtaccgtgac gtcgtcgaaa 3840 tcatcagccg gatcc 3855 // |
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