 |
|
EBI DbfetchID M62755; SV 1; linear; genomic DNA; STD; PLN; 4030 BP. XX AC M62755; XX DT 26-JAN-1992 (Rel. 30, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 6) XX DE Potato 4-coumarate--CoA ligase (St4C1-1) gene, complete cds. XX KW 4-coumarate--CoA ligase. XX OS Solanum tuberosum (potato) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum. XX RN [1] RP 1-4030 RX PUBMED; 2022667. RA Hahlbrock K., Schulze-Lefert P., Becker-Andre M.; RT "Structural comparison, modes of expression, and putative cis-acting RT elements of the two 4-coumarate--CoA ligase genes in potato"; RL J. Biol. Chem. 266:8551-8559(1991). XX FH Key Location/Qualifiers FH FT source 1..4030 FT /organism="Solanum tuberosum" FT /strain="Datura" FT /mol_type="genomic DNA" FT /tissue_lib="EMBL4" FT /db_xref="taxon:4113" FT exon 523..1604 FT /gene="St4C1-1" FT /number=1 FT mRNA join(523..1604,2106..2304,2954..3167,3278..3380,3474..3745) FT /gene="St4C1-1" FT /product="4-coumarate--CoA ligase" FT CDS join(603..1604,2106..2304,2954..3167,3278..3380,3474..3593) FT /codon_start=1 FT /gene="St4C1-1" FT /product="4-coumarate--CoA ligase" FT /db_xref="GOA:P31684" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR020845" FT /db_xref="UniProtKB/Swiss-Prot:P31684" FT /protein_id="AAA33842.1" FT /translation="MPMDTETKQSGDLIFRSKLPDIYIPKHLPLHSYCFENLSEFNSRP FT CLIDGANDRIYTYAEVELTSRKVAVGLNKLGIQQKDTIMILLPNCPEFVFAFIGASYLG FT AISTMANPLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAIENDLKVICVDSVPEGCV FT HFSELIQSDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENA FT NLYMHSDDVLMCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIAQFLELIPKHKVTIG FT PFVPPIVLAIAKSPLVDNYDLSSVRTVMSGAAPLGKELEDAVRAKFPNAKLGQGYGMTE FT AGPVLAMCLAFAKEPFDIKSGACGTVVRNAEMKIVDPDTGCSLPRNQPGEICIRGDQIM FT KGYLNDPEATARTIEKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAL FT LINHPDISDAAVVPMIDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFYKRIKRVF FT FVETVPKSPSGKILRKDLRARLAAGISN" FT intron 1605..2105 FT /gene="St4C1-1" FT /number=1 FT exon 2106..2304 FT /gene="St4C1-1" FT /number=2 FT intron 2305..2953 FT /gene="St4C1-1" FT /number=2 FT exon 2954..3167 FT /gene="St4C1-1" FT /number=3 FT intron 3168..3277 FT /gene="St4C1-1" FT /number=3 FT exon 3278..3380 FT /gene="St4C1-1" FT /number=4 FT intron 3381..3473 FT /gene="St4C1-1" FT /number=4 FT exon 3474..3745 FT /gene="St4C1-1" FT /number=5 FT polyA_site 3745 FT /gene="St4C1-1" XX SQ Sequence 4030 BP; 1308 A; 648 C; 708 G; 1365 T; 1 other; gtcaactttg aatgtcaatt ttgaccaatt ttttcttact ttctgtccaa atttatcgaa 60 atgtaatttg actgaacacg atattttaga aatatgaaaa actttgctta gttctatagc 120 catccttaaa agttgaagag tacacttttg tcaaataagt gagatccaat tgggatagaa 180 tattgatagt atgattaaac atttatcaaa taaaaaattg tatcgttcct ttttaaaata 240 tactaaatca aaaaaaatgt atcaggtaaa ttaagaaaaa tgattactgt ttttctttta 300 aaatcccaat tatctatcat cacctaacca taagaactac tctcaccaac cacaagagac 360 tccatttttt ttatatcccc caaaaaggaa aaaaaaattg aaacaagttt ccatgaagtt 420 gcccctgaac aaccctaaat acccataaac tccctttcac ctaccacaga cttgtgtatt 480 ttttctcata tatatattca ttaatctttg cacattcatc ttcaggacac catagctaaa 540 aatctacttt tccttttagc ttttcagtgt gctccaattt ttttcctttt ttagctctca 600 agatgccgat ggataccgaa acaaagcaat caggagattt aatctttcga tctaaactcc 660 ctgatattta catccctaaa catttgcctt tacattctta ttgctttgaa aatctatcgg 720 agtttaattc ccggccctgt ttgattgatg gtgcaaatga tcgaatctat acttatgctg 780 aagttgaact tacttcgaga aaagttgctg ttggtcttaa caaattgggg atccaacaga 840 aggatacaat catgatcctt ttgcctaatt gccctgaatt tgtgtttgcg tttattggcg 900 catcgtatct aggagcaatt tcaacaatgg ctaatcctct gtttacacca gcagaggtag 960 taaagcaagc caaagcctca agtgctaaga ttgttatcac gcaagcttgt tttgcgggga 1020 aagtgaagga ctacgcaatt gaaaatgatt tgaaggtaat atgcgtcgat tcagtaccgg 1080 aaggttgtgt tcatttctcc gaattgattc aatccgacga acacgaaatt cctgatgtga 1140 aaatccagcc ggacgatgtc gtagctctgc cgtattcctc cgggactacc gggctgccga 1200 aaggggtgat gttgacacac aaaggattag taacaagcgt tgcacaacaa gttgatggag 1260 aaaatgctaa tttgtatatg cacagcgatg atgtgttgat gtgtgtgttg cctttgttcc 1320 atatttactc actcaattct gttttgctct gtgcattgag agtcggagca gcaattttga 1380 ttatgcagaa attcgacatt gctcagtttt tagagttgat accgaagcat aaagtgacaa 1440 ttggaccatt tgttccgcct attgttctcg ccattgctaa gagtccatta gttgataact 1500 acgatctttc atcagtaaga acagtcatgt ctggtgctgc accattagga aaggaacttg 1560 aagatgccgt ccgagcaaaa ttccctaacg ccaaactcgg tcaggtaaat attattttct 1620 tttgcgtgga gttagaattt aaatttatta ttaatttacc cttaaatata aggtatacgc 1680 caaagttatt gatcttttaa tcttcatgtt cttatcctga aatacatcca tgtgctgatg 1740 cgtagtttcc caaaaacaat attttaaaga gatacactga aaccccaacc ttaccaaact 1800 cagaaaaaat ttaattttag ttacagttat agttttccta attttggagt tacaaatgta 1860 ttttgcttga cctaaggaaa tattggttgg taaacgtcta ttcttaaaaa caatgtgtac 1920 aagaatacgt gcacgccttt gtggacatat tgattttgac ttttaataat aatatatttg 1980 ccttattatg gtttcttgat agtagtgact agccagccag gatacgctgt attattttat 2040 tattgttgaa taaatttcca aatttaaatt tattggctaa ttaataaatt attaaattaa 2100 aatagggtta tggaatgacg gaagccggtc ctgtgctggc gatgtgtttg gcatttgcga 2160 aagaaccgtt tgatattaaa tcaggggcat gtggtactgt tgtgaggaac gcggagatga 2220 aaattgtgga tccggatacg ggttgctctc tgccccgtaa ccaacccggt gaaatttgca 2280 ttagaggtga tcaaatcatg aaaggtatgc taaaatcttt tgcgtgaata ttcttcgtaa 2340 acttaagtta cgtgtcaaat tagtatttta gttaggtgac catttacata tatttccaaa 2400 atacacgttt ttattaggta catacgtata tagataataa cacagtttgt taagaataat 2460 aaatatacca actagtggac ctagatcaag atgcattagg ggtcattcat ataccaacag 2520 agtaaaactt atgttgattt gattaatatt tcaacgccac aaaaattgat actagcatca 2580 aaagctcacc aaccactcct accaattttt ttttaaaagc caaagaattt ttttacttta 2640 ttgagtgaga ggttgatatt attaatcaga agtttaaaat taaaaaaacg cgaaaaataa 2700 aaagtatatt cttttaaaag attaaaaaag aaaaagtaaa acatacaagg ttgaaacaaa 2760 gtttagagta cctttcttat tacctattga aacatgtgga gccttttacc ataaagttgt 2820 ggaactattc ggtgtatatt cattcaacca cctgcccaac tacttttcga ctttggtctt 2880 aaaaatttaa gttatcgcat atttttattc atttaattat atattaataa aaacaatgat 2940 tatttctttg taggttactt gaatgatccc gaggccacag ctagaacaat agaaaaagaa 3000 ggatggttac acactggcga tattggattc attgacgatg atgatgagct tttcattgtg 3060 gaccgattga aggaattgat caaatacaaa ggatttcaag tggcgcctgc cgagcttgaa 3120 gctcttctta tcaaccaccc cgacatttct gatgctgctg ttgtcccgta agttagttat 3180 aatttttgta atgtacaact ataaatgcct aacgtacgat acagctagct caaaaaatgg 3240 tctaaattct gataatttat taaattgtgt tggacagaat gatagatgaa caagcgggag 3300 aagttccagt ggcttttgtt gttagatcaa atggatctac cattactgag gatgaagtca 3360 aggatttcat ctccaagcag gtttgtttca tctcgaaaca attatgtgtt tgaataaaag 3420 tgcatgtaaa cattaagtga ttcatttttg atatgttttt caaaattttg caggtgatat 3480 tctataagag aataaagcgt gtatttttcg tagagacggt accaaaatct ccgtcaggaa 3540 aaattctgag aaaagattta agagctagac tggctgctgg tatttcaaat tgatggaggc 3600 aataaccaaa acaagattca ccatttttag agatactata tgttgtttga tttgtacctt 3660 atgttcgatc aatataattg ccagtttggc aacggacgaa tatgtctgta aattaattta 3720 taagacttct tttattcatc ttttcatatt attatgtgat gataaggtat caaaagtatt 3780 tttttgtggg aaagaaatat atcaagagtt tgtgtttaca ttttttcttt tgtattgttc 3840 ttatattata atagttaagg tcttgctatg agttgattac acaacaaaaa ggactctcgt 3900 tgatctagtg tttaatgaaa ttagttaaaa gtcacgaggt tgaatatttt aaattttatt 3960 aaaantgaaa atatgaggta attttttagt ggtcgaagaa agttaaaagt atagaaaatg 4020 agtcttgatc 4030 // |
|