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EBI DbfetchID M59429; SV 1; linear; genomic DNA; STD; INV; 5527 BP. XX AC M59429; XX DT 05-MAR-1991 (Rel. 27, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 15) XX DE T. thermophila F-antigen (tfa) gene, complete cds. XX KW F-antigen. XX OS Tetrahymena thermophila OC Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; OC Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena. XX RN [1] RP 1-5527 RX DOI; 10.1016/0022-2836(92)90869-L RX PUBMED; 1469718. RA Hummel R., Norgaard P., Andreasen P.H., Neve S., Skjodt K., Tornehave D., RA Kristiansen K.; RT "Tetrahymena gene encodes a protein that is homologous with the RT liver-specific F-antigen and associated with membranes of the Golgi RT apparatus and transport vesicles"; RL J. Mol. Biol. 228(3):850-861(1992). XX CC On Apr 9, 1996 this sequence version replaced gi:161862. XX FH Key Location/Qualifiers FH FT source 1..5527 FT /organism="Tetrahymena thermophila" FT /chromosome="VII" FT /strain="B1868" FT /mol_type="genomic DNA" FT /db_xref="taxon:5911" FT mRNA join(2538..2948,3038..3307,3667..4130,4271..4572) FT /gene="tfa" FT /note="1 of 6 possible mRNA's" FT exon 2538..2948 FT /gene="tfa" FT /number=1 FT /note="1 of 5 minor transcription start points" FT /experiment="experimental evidence, no additional details FT recorded" FT exon 2540..2948 FT /gene="tfa" FT /number=1 FT /note="2 of 5 minor transcription start points" FT /experiment="experimental evidence, no additional details FT recorded" FT mRNA join(2540..2948,3038..3307,3667..4130,4271..4572) FT /gene="tfa" FT /note="2 of 6 possible mRNA's" FT mRNA join(2544..2948,3038..3307,3667..4130,4271..4572) FT /gene="tfa" FT /note="6 of 6 possible mRNA's" FT exon 2544..2948 FT /gene="tfa" FT /number=1 FT /note="major transcription start point" FT /experiment="experimental evidence, no additional details FT recorded" FT mRNA join(2549..2948,3038..3307,3667..4130,4271..4572) FT /gene="tfa" FT /note="3 of 6 possible mRNA's" FT exon 2549..2948 FT /gene="tfa" FT /number=1 FT /note="3 of 5 minor transcription start points" FT /experiment="experimental evidence, no additional details FT recorded" FT mRNA join(2557..2948,3038..3307,3667..4130,4271..4572) FT /gene="tfa" FT /note="4 of 6 possible mRNA's" FT exon 2557..2948 FT /gene="tfa" FT /number=1 FT /note="4 of 5 minor transcription start points" FT /experiment="experimental evidence, no additional details FT recorded" FT mRNA join(2561..2948,3038..3307,3667..4130,4271..4572) FT /gene="tfa" FT /note="5 of 6 possible mRNA's" FT exon 2561..2948 FT /gene="tfa" FT /number=1 FT /note="5 of 5 minor transcription start points" FT /experiment="experimental evidence, no additional details FT recorded" FT CDS join(2610..2948,3038..3307,3667..4130,4271..4412) FT /codon_start=1 FT /transl_table=6 FT /gene="tfa" FT /product="F-antigen" FT /db_xref="GOA:Q27203" FT /db_xref="HSSP:1CJX" FT /db_xref="InterPro:IPR005956" FT /db_xref="UniProtKB/Swiss-Prot:Q27203" FT /protein_id="AAA96492.1" FT /translation="MSENKDHVVVGYTEKPVGERPTGGKFLGYDHLHFWVGNAKQAAGW FT YTSRFGFEYYAYKGLETGSREVATHVVRNKQGVTLAFSTPYGNDKDNQREMNQHQSLHG FT DGVKDVAFAVEDCHSIYNKAIQRGAKCAYPPQDLKDEHGSVTIAAVHTYGEVIHTFIQR FT NDYKGFFMPGFVAHPLKDPLNNVLPDISYNYVDHIVGNQPDNMMTSAADWYEKTLDFHR FT FWSVDDSMIHTEFSSLRSIVMTDYDQKIKMPINEPADGKRKSQIQEYIDFYAGPGVQHI FT ALNTSDVINTVEGLRARGVEFLSIPTSYYDNLRKALTAQTSITVKEDLDVLQKNHILVD FT YDEKGYLLQIFTKPVEDRPTLFYEIIQRNNHQGFGAGNFKSLFVSLELEQEKRGNLTEI FT VKNIY" FT exon 3038..3307 FT /gene="tfa" FT /number=2 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 3667..4130 FT /gene="tfa" FT /number=3 FT /experiment="experimental evidence, no additional details FT recorded" FT exon 4271..4572 FT /gene="tfa" FT /number=4 FT /experiment="experimental evidence, no additional details FT recorded" XX SQ Sequence 5527 BP; 2139 A; 643 C; 715 G; 2030 T; 0 other; aagctttcgt tatttttggt aattacttta ttttgttatt taagaattat aatagaaatt 60 gtcattagat ttatttaaaa tgcaagatta tctctatcaa attcatatta taaaagaaat 120 aatattcaag atgttatgta ttttaaatta aaattttttt ttataaaata taagctgatt 180 gctttagaag agacgagata gatgcaacac attaccctgt tttccattaa gtaatatata 240 actaataaat cgaaaaagag aaaataaaat aaacttatag aatcaagatt gaacttttct 300 taataagaat taattaaata tttaaatgaa aataaattca acaaaaaata ttctattcag 360 caataaattt aatcaattta atgtaattaa ctaattttgt atcatattaa agatggaagt 420 tgttagagca tacactcaag attacttgat actaagaatg aagatattaa aatataaatg 480 gttatgaagg atctttaaga aacatatgag agtttagtca gaaatatttt tggtgaagat 540 gtttaatata gatggatacc agcttatttc catcacggaa ccttctttgg aaatggaaat 600 atatttcaat ggagaatggg tagaaatgtt tggatgtggt atccttcgta aaagaaaatt 660 atgaaaaact tcggaagaca tgatgatgat attgcatggg catcaggtgg tggcttagaa 720 agattcgcaa tgcttctttt tggcattcct gatattaggt tatttattaa tttaaaatta 780 tactaaaata agtttatttg cctactaaca aaagtttaat cttttggatg gataaatcta 840 cttttagaat aataaaaagt taaaaatatc gtttgattta atttaattat ttttatttct 900 atagactttt ctggagtaaa gattctagat ttttgaatca atttaaggct ggacaaatta 960 acaaatttta gccattcagt aaatatcctg cttgctataa ggatatatct ttttggataa 1020 aagatatgac aacttttgaa gaaaatgata tttatgaaat tgtgagagaa attggaggtg 1080 atcttattga ataggtagag tgtgttgaca cctatgagaa taaaaagact gggaaaacta 1140 gcaaatgctt tagaataaat tacagatcat tagaaagaac tcttacaaat taagaagtaa 1200 aatttttatt tcgacccatt ttaattatca attaaatatc ttttgaatat ttacttgaat 1260 atttaattaa tgtcgttttt agtttttagg ttaagattga ataaataaaa aaatttttat 1320 ttattttttt tatgctaata aaaaataaga atattctttc ggcataataa atttaattgt 1380 tagtataata acctaaatta attaattaag attattaaga agaactttca caaactctgt 1440 tctagcttaa cttgtcgaat aatttctttc attaactttt ttttcttaaa aatagattga 1500 caccttataa ttctccatta gagatgaaat caaaaataaa ttaggttatg aattaagatg 1560 aaataaatag tatttttatc taacaaaggc atatattttc attaactgaa gtgtatttaa 1620 gtttattcat aattagacag caaaaatatc aacaaaaaaa aataacaaaa aacaataatt 1680 aatcttatta taataatttt atatgcatta gatatatcaa tttttaaaat tttggtatgt 1740 gttttaaatg taaattttta ttatatcgaa tcaagtaaat actgatatat ttctttattg 1800 cttttaaatt atcttatttt cttttttggc ttattaatta tctcaaaacg aattgccaat 1860 aaaaagataa ttcaatactt atacttctag tttaaacctc tcttatcttt agatagatag 1920 atatatagat actcttttta atttaagaag aattctgatt actatttttt ttgttttatt 1980 cttcaataaa atccagaaaa attttaaaag gatttgtaaa ttgattaata ttgcgtcaat 2040 aatccttact cagctaaaaa tagtttggaa gatttgtctg tttatataag actttaattg 2100 accttgtaaa atgaaaatta gttgaaaact caactcaatc gacggaatga agtttgtgtg 2160 agctttattg aataaagttt tggtgaaaaa ataaatcata ttttgataga attcaaaaaa 2220 tggtcgattt ggattgttaa gaagaattgt attgagatga tggtataaat aagtaatagt 2280 tagtatgttc gaactcagta gcaaaagaaa aattaaatca atagaatatt agaatgactc 2340 aactagatgt ttataaatat attattcgct gttaccttca ataataaggt ggggaagcat 2400 gttaagtaag tcgcgcaatt aaaaagtcag atatttcgta attattggat ttacaagaaa 2460 cctttttaat ttatattacg ctacaacatt ccttacatct gaagcataaa tagaagttga 2520 tgtatcctca ctttgtttat aattaaaaca aaaaattaaa taaaacaaaa tcaagcattc 2580 ttaaaaatca aaataaaaag atcaaaaaaa tgagtgaaaa taaagatcac gttgttgttg 2640 gatacactga aaagcctgtt ggtgaaagac ctactggtgg taagttctta ggttatgatc 2700 acttacattt ctgggttggt aatgccaagc aagctgcagg atggtacact tctcgttttg 2760 gtttcgaata ctatgcttac aagggtttgg aaactggtag cagagaagtt gcaactcacg 2820 ttgtccgtaa taaataaggt gtcactttag ccttcagtac tccctatgga aacgacaagg 2880 acaactaaag ggaaatgaac taacattaaa gtttacacgg tgatggtgtt aaggatgtcg 2940 cttttgctgt aattttaatt atctaaattc tttatcataa attaaaaaag aaaagctaat 3000 gaaaaaatga taatttaact tatattttat taataaggtt gaagactgtc actctattta 3060 caacaaggct atctaaagag gtgccaagtg tgcttatcct cctcaagatt tgaaggacga 3120 acatggtagt gtcactattg ctgcagtcca cacttatggt gaagttattc acacatttat 3180 ccaaagaaat gactataaag gtttcttcat gcctggattt gttgctcacc ccttaaagga 3240 cccccttaac aatgttcttc ctgacatcag ctacaactat gtagatcata ttgttggtaa 3300 ccaacctgta agattaaatt taaaaaaaat attttgaagg aataattaat tcagtaaaaa 3360 aaatgtttaa atggctatct tataagtaat ctactacaaa ctcccatcaa agatgaagaa 3420 atttattatt aaagacaaat agaacttaat aaatacttaa aaatagcaaa taaaatcaat 3480 tttagaaata ttctaaacat ttctctagaa aaaggaaaaa agcatagcca taaattcaag 3540 cgagtagtta gtcattcata aatttgatta aaatacaaaa agagcaaatt tataattaaa 3600 taaattaatt aattaaatag atgtatgtat ttaataaaat gctcatattt tgtttattat 3660 aaataggata acatgatgac ctctgctgct gactggtatg aaaagacttt ggacttccac 3720 agattctggt ctgttgatga cagcatgatc cacactgaat tctcttcctt aagatctatt 3780 gtcatgactg actacgatta aaagattaaa atgcccatta acgaacctgc tgatggaaag 3840 agaaaatcat aaatctaaga atatattgat ttctatgctg gccctggtgt ataacacatt 3900 gccttgaata caagtgatgt aatcaacact gtcgaaggtc ttagagctag aggtgttgaa 3960 tttttatcta ttcctacttc ctattatgat aatctcagaa aggctcttac tgcatagact 4020 tctatcactg ttaaggaaga tcttgatgtc ttacaaaaga accatatttt agttgattat 4080 gatgaaaagg gttacctctt ataaatcttc accaagcctg ttgaagatag gtaaaagatt 4140 tacttcattt attatttagt ttttaattta gattagactt tgaaattcat caaacttttc 4200 tgatgaatct tcgaacaatt ttgatcaaac taaacttttt ctaatatttt taattaatta 4260 ataaaaatag acctactctc ttctacgaaa tcattcaaag aaataaccat taaggattcg 4320 gtgctggtaa cttcaagtcc ttgtttgtct ctttggaact tgaataagaa aagagaggaa 4380 accttactga aattgtcaag aacatctatt gattaataac aaattttaaa taataataat 4440 catttaaatt tctagagtac ttaataaatt ttactaaatt attatgaaat aaataatgca 4500 aatctaatta agactatata tattttacat attttagtat gctttcttaa ttatgaattg 4560 ctcattcaag ctaaatgctt cattagaatt tttatttgtt taaataatta cttaaaattt 4620 taattatatt ctaattcatt taaaattatt cttcttaatt gttatcctaa taatgtttca 4680 ttgatttatc catctattta atcattcatt gatctttgta tactcaatta tatgaaattt 4740 taaaagaaat ttaataaatt attttgatct tctttaattg accttttctt gtttaaaaat 4800 atgtaaacat ccaacaattt taggaaatat tatttgtaaa ataaaataag acaaacaata 4860 ttttctatta agtgataata gtctatagta tttatccttt gaaagtctat aaaaatgttg 4920 taatgcctat gaatttaatt taaaaaaaaa atagatctat ctaaatagca aattagtttt 4980 agaaatataa cacataatat gacattaaat ttaatatact cacaaaagaa aaaatttata 5040 gtattataaa aatttaatga aattatagta gagattatga taaatatatt tttattatca 5100 tttattcgaa tttatttttt ttaaattcac gttaaaaatc aattaaattt aaacctcaaa 5160 tttaatatgt agaaaaggtt tactaacatt attttttttg tttattttta tcattattta 5220 tcaagtaaat caaatcttag aaatatatat catataatat acacacaaat cgattaataa 5280 ttttacttac aactaatata agaaaagatt tatctaattt taaatataat agaagctctc 5340 tttatattct atcaataaat aagaatctga aaataaaact accataatta ttcttattga 5400 tcttaattgc ttttggctca acagtcagta cccatcaaat aaaaaagcca aatatttcac 5460 tataaagaag ttttttcctt tcaatttttg gttcatcata aaaaatgatt ataaaattaa 5520 aaagctt 5527 // |
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