spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M58688; SV 1; linear; mRNA; STD; ROD; 115 BP.
XX
AC   M58688;
XX
DT   22-FEB-1991 (Rel. 27, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 4)
XX
DE   Rat AMP deaminase type I (AMPD1) mRNA, 5' end.
XX
KW   AMP deaminase.
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
XX
RN   [1]
RP   1-115
RX   PUBMED; 2398891.
RA   Mineo I., Clarke P.R.H., Sabina R.L., Holmes E.W.;
RT   "A novel pathway for alternative splicing: identification of an RNA
RT   intermediate that generates an alternative 5' splice donor site not present
RT   in the primary transcript of AMPD1";
RL   Mol. Cell. Biol. 10(10):5271-5278(1990).
XX
DR   Ensembl-Gn; ENSRNOG00000018656; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000025248; Rattus_norvegicus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..115
FT                   /organism="Rattus norvegicus"
FT                   /strain="Sprague-Dawley"
FT                   /mol_type="mRNA"
FT                   /dev_stage="adult"
FT                   /tissue_type="soleus muscle"
FT                   /db_xref="taxon:10116"
FT   mRNA            join(1..85,86..97,98..115)
FT                   /partial
FT                   /gene="AMPD1"
FT   exon            1..85
FT                   /gene="AMPD1"
FT                   /number=1
FT   CDS             join(64..85,86..97,98..115)
FT                   /partial
FT                   /codon_start=1
FT                   /gene="AMPD1"
FT                   /product="AMP deaminase"
FT                   /db_xref="GOA:P10759"
FT                   /db_xref="InterPro:IPR016297"
FT                   /db_xref="UniProtKB/Swiss-Prot:P10759"
FT                   /protein_id="AAA40726.1"
FT                   /translation="MPLFKLTGQGKQIDDAM"
FT   exon            86..97
FT                   /gene="AMPD1"
FT                   /number=2
FT   exon            98..115
FT                   /partial
FT                   /gene="AMPD1"
FT                   /number=3
XX
SQ   Sequence 115 BP; 30 A; 36 C; 19 G; 30 T; 0 other;
     ccatccccac agtctctctc cttcctctgc tgtgctgtcc tagaatccag gatcccagtc        60
     acaatgcctc tgttcaaact tacaggtcaa ggaaaacaaa ttgatgatgc aatgc            115
//
spacer
spacer