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EBI DbfetchID M55657; SV 1; linear; genomic DNA; STD; FUN; 2716 BP. XX AC M55657; M33035; XX DT 05-APR-1991 (Rel. 28, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE Aspergillus niger pectin lyase D (pelD) gene, complete cds. XX KW pectin lyase D. XX OS Aspergillus niger OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae; OC Aspergillus. XX RN [1] RP 1-2716 RX DOI; 10.1016/0378-1119(90)90211-9 RX PUBMED; 2373363. RA Gysler C., Harmsen J.A.M., Kester H.C.M., Visser J., Heim J.; RT "Isolation and structure of the pectin lyase D-encoding gene from RT Aspergillus niger"; RL Gene 89(1):101-108(1990). XX FH Key Location/Qualifiers FH FT source 1..2716 FT /organism="Aspergillus niger" FT /strain="N756" FT /mol_type="genomic DNA" FT /db_xref="taxon:5061" FT exon 1..888 FT /gene="pelD" FT /number=1 FT mRNA join(1..888,954..1097,1159..1284,1348..1444,1502..2716) FT /gene="pelD" FT mat_peptide join(689..888,954..1097,1159..1284,1348..1444,1502..2053) FT /gene="pelD" FT /product="pectin lyase D" FT sig_peptide 689..745 FT /gene="pelD" FT CDS join(689..888,954..1097,1159..1284,1348..1444,1502..2056) FT /codon_start=1 FT /gene="pelD" FT /product="pectin lyase D" FT /db_xref="GOA:P22864" FT /db_xref="InterPro:IPR002022" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/Swiss-Prot:P22864" FT /protein_id="AAA32701.1" FT /translation="MKYAAALTAIAALAARAAAVGVSGTPVGFASSATGGGDATPVYPT FT TTDELVSYLGDDEARVIVLSKTFDFTDTEGTTTTTGCAPWGTASGCQLAINKDDWCTNY FT EPDAPTTTVTYNTAGELGITVNSNKSLIGEGTSGVIKGRGLRMVSGVSNIIIQNIAVTD FT INPEYVWGGDAITLDEADLVWIDHVTTARIGRQHYVLGTDADSRVSITNNYINGESDYS FT ATCDGHHYWNVYLDGSSDKVTFSGNYLYKTSGRAPKVQDNTYLHIYNNYWENNSGHAFE FT IGSGGYVLAEGNYFSNVDTVLETDTFEGALFSSDSASSTCESYIGRSCVANVNGGDLTG FT TSTTVLSNLSGDTLPSADAASTSPASNAGQGNL" FT exon 954..1097 FT /gene="pelD" FT /number=2 FT exon 1159..1284 FT /gene="pelD" FT /number=3 FT exon 1348..1444 FT /gene="pelD" FT /number=4 FT exon 1502..2716 FT /gene="pelD" FT /number=5 XX SQ Sequence 2716 BP; 601 A; 832 C; 606 G; 677 T; 0 other; actagtagtc taatcgctac aaagtgcatc aggggagcca gccatgggaa caaagctcga 60 tgcaatctga cttaatcagt ctccacatcg agctgggcgt gaaactgatg gacactccgc 120 catctactcg aaaccatctc taattaagca ctcacggctc cacttcttct ctgggcttcc 180 tccgtgccgc tcggacagct cactggatgc tcccagtgga gtcgtttcac cggatcccct 240 caacgctgac gatcgcattc ccaaggcatc cactagctct ctcaagcaga ccagggcagt 300 gaggtgatcg gcggtggcct cacgagtcac gacattactg tcgccgggac ccagatgttt 360 attctccctc cctgtcgacc taatggccca caccacatcc accgtcataa cgccgatatt 420 ggtcgagatt gcgctggagt cgcagaggga gtcttcggca tacccaccgg ctccgtaaac 480 ctccatcagg agaattgttc caaacttcca tgagccatgg cttcgaggac cacagccctc 540 tatataaggg acgagcccgt cgaccgtctc ggatcctttc ctctctggct caacacacac 600 aactttgtca ttctttctct tgtttctctt ttgtttctaa ttgtaacctt tgtcactctt 660 ttctaaaccg acttgcaaaa cttccaggat gaagtacgct gctgctctca cggctattgc 720 cgccctcgct gcccgcgccg ctgctgtcgg tgtctccggc actcccgtgg gtttcgcctc 780 ctccgccact ggtggtggtg atgctacccc cgtctaccct accaccaccg atgagctggt 840 ctcttacctc ggtgatgacg aggcccgtgt cattgtcctg tccaagacgt gagttttgaa 900 tccaaagcaa tgaacgaatc gattcccggc tgaccagtgt ccgaatttgc cagtttcgac 960 ttcactgaca ctgagggcac taccacgacc accggttgcg ctccctgggg tactgcctcc 1020 ggctgccagc tggccatcaa caaggacgac tggtgcacca actacgagcc cgatgctccc 1080 accaccaccg tcacctagta agttgccttc tgaggtatcc tcgagtataa ggaagaggaa 1140 atgctgacaa gaggatagca acactgctgg tgaactcggt atcaccgtca actccaacaa 1200 gtccttgatc ggtgagggta ccagcggtgt catcaagggc cgtggtctcc gcatggtcag 1260 cggtgtctcc aacatcatca tccagtatgc atcgtccagg actacataca ttactcccat 1320 cgcaaactaa ccatggaatt cccacaggaa cattgctgtc accgacatca accccgagta 1380 cgtctggggt ggtgacgcca tcaccctcga cgaggctgac ttggtctgga ttgaccacgt 1440 tactgtaagt cgccatccag catcatgatt ttcatccttc caccactaat gaatgcttca 1500 gactgcccgc attggtcgcc agcactacgt cctcggtacc gacgccgaca gccgtgtctc 1560 catcaccaac aactacatca acggcgagtc tgactactct gctacttgcg acggccacca 1620 ctactggaac gtgtaccttg acggctctag cgacaaggtc accttcagtg gcaactacct 1680 gtacaagacc tccggccgtg cccccaaggt ccaggacaac acctacctcc acatctacaa 1740 caactactgg gagaacaact cgggccacgc tttcgagatc ggctccggtg gctacgtcct 1800 cgccgagggt aactacttct ccaacgtcga caccgtcctc gagaccgaca ccttcgaggg 1860 tgctctcttc tcctctgaca gcgcctcctc cacctgcgag tcctacattg gccgttcctg 1920 cgttgccaac gtcaacggcg gtgacctcac cggcacctcc accaccgtcc tctccaacct 1980 cagcggcgac accctcccct ctgctgatgc tgccagcacc agccccgcct ccaacgctgg 2040 tcagggtaac ctgtaagcgg tatcgctccg tcgggctctt actgcagatc gctttggtga 2100 tgttgtcgag tttgatgatt cagacaagac gagttgagtt ttctgctgtt gtacagcgga 2160 aaagtgtgtt cgcttagatt ctatcttagc ctaatcaata attctaagat ggacttgatc 2220 catagtaatt ctccattcaa ttgtgattta gtaaatttga ttttctttgc ctagtcgcgc 2280 ttctaaacta ggatcacagc tgctcttaga tcctcgatgc ccaaggccac taacgctttc 2340 tgcctcagga ctccacagtc cgagacggat gtactgcctg aggcctaagt gtgcttctgc 2400 ccaaggcaac aatgggcatg atcatacatt cactatacct gtgctctaag gaatagtagg 2460 atcggatgtg aaccattata tttaactgag tgatctgtgg tcttttcata tttgcaatga 2520 cttgcttaac ttatttggcc gttcttccat agatgcgatc atgttcggta gacttcaaaa 2580 acatgtgatt gctgacatat tctgcctatt tctgctgcaa ggcgtatgaa aaatggcatt 2640 cctgccgtgg ctaatggcca aatgctatgg catcacaata ctttttctgc tggctatcac 2700 attgcatcga gctagc 2716 // |
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